메뉴 건너뛰기




Volumn 11, Issue 1, 2010, Pages

Integrative analysis of the heat shock response in Aspergillus fumigatus

Author keywords

[No Author keywords available]

Indexed keywords

ACETYL COENZYME A SYNTHETASE; ACTIN BINDING PROTEIN; ADENOSYLHOMOCYSTEINASE; ALANINE TRANSFER RNA LIGASE; ALPHA TUBULIN; AMINOPEPTIDASE; AP 2ALPHA LIKE TRANSCRIPTION FACTOR; CALNEXIN; CARBOXYLESTERASE; CYTOCHROME C PEROXIDASE; FUNGAL RNA; GLUTAMATE AMMONIA LIGASE; GLYCINE TRANSFER RNA LIGASE; HEAT SHOCK PROTEIN 30; HEAT SHOCK PROTEIN 60; HEAT SHOCK PROTEIN 70; HEAT SHOCK PROTEIN 90; HEAT SHOCK TRANSCRIPTION FACTOR 1; HEXOKINASE; ISOCITRATE DEHYDROGENASE; MANNITOL; NITRITE REDUCTASE; NITROREDUCTASE; PROTEIN DNAJ; PROTEOME; PYRUVATE CARBOXYLASE; TRANSCRIPTION FACTOR AP 2; TRANSCRIPTOME; TRANSKETOLASE; UNCLASSIFIED DRUG; TRANSCRIPTION FACTOR;

EID: 76749131138     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-11-32     Document Type: Article
Times cited : (83)

References (77)
  • 1
    • 22544479127 scopus 로고    scopus 로고
    • Aspergillus fumigatus: saprophyte or pathogen?
    • 10.1016/j.mib.2005.06.017, 16019255
    • Tekaia F, Latge JP. Aspergillus fumigatus: saprophyte or pathogen?. Curr Opin Microbiol 2005, 8:385-392. 10.1016/j.mib.2005.06.017, 16019255.
    • (2005) Curr Opin Microbiol , vol.8 , pp. 385-392
    • Tekaia, F.1    Latge, J.P.2
  • 2
    • 0036405360 scopus 로고    scopus 로고
    • Menacing mold: the molecular biology of Aspergillus fumigatus
    • 10.1146/annurev.micro.56.012302.160625, 12142473
    • Brakhage AA, Langfelder K. Menacing mold: the molecular biology of Aspergillus fumigatus. Annu Rev Microbiol 2002, 56:433-455. 10.1146/annurev.micro.56.012302.160625, 12142473.
    • (2002) Annu Rev Microbiol , vol.56 , pp. 433-455
    • Brakhage, A.A.1    Langfelder, K.2
  • 3
    • 22844438204 scopus 로고    scopus 로고
    • Thermotolerance and virulence of Aspergillus fumigatus: role of the fungal nucleolus
    • 10.1080/13693780400029486, 16110798
    • Bhabhra R, Askew DS. Thermotolerance and virulence of Aspergillus fumigatus: role of the fungal nucleolus. Med Mycol 2005, 43(Suppl 1):S87-93. 10.1080/13693780400029486, 16110798.
    • (2005) Med Mycol , vol.43 , Issue.SUPPL 1
    • Bhabhra, R.1    Askew, D.S.2
  • 4
    • 37549070384 scopus 로고    scopus 로고
    • O-Mannosyltransferase 1 in Aspergillus fumigatus (AfPmt1p) is crucial for cell wall integrity and conidium morphology, especially at an elevated temperature
    • 10.1128/EC.00261-07, 2168251, 17905922
    • Zhou H, Hu H, Zhang L, Li R, Ouyang H, Ming J, Jin C. O-Mannosyltransferase 1 in Aspergillus fumigatus (AfPmt1p) is crucial for cell wall integrity and conidium morphology, especially at an elevated temperature. Eukaryot Cell 2007, 6:2260-2268. 10.1128/EC.00261-07, 2168251, 17905922.
    • (2007) Eukaryot Cell , vol.6 , pp. 2260-2268
    • Zhou, H.1    Hu, H.2    Zhang, L.3    Li, R.4    Ouyang, H.5    Ming, J.6    Jin, C.7
  • 5
    • 3843062240 scopus 로고    scopus 로고
    • THTA, a thermotolerance gene of Aspergillus fumigatus
    • 10.1016/j.fgb.2004.06.004, 15338574
    • Chang YC, Tsai HF, Karos M, Kwon-Chung KJ. THTA, a thermotolerance gene of Aspergillus fumigatus. Fungal Genet Biol 2004, 41:888-896. 10.1016/j.fgb.2004.06.004, 15338574.
    • (2004) Fungal Genet Biol , vol.41 , pp. 888-896
    • Chang, Y.C.1    Tsai, H.F.2    Karos, M.3    Kwon-Chung, K.J.4
  • 6
    • 0029832595 scopus 로고    scopus 로고
    • Two-dimensional gel protein database of Saccharomyces cerevisiae
    • 10.1002/elps.1150171106, 8982601
    • Boucherie H, Sagliocco F, Joubert R, Maillet I, Labarre J, Perrot M. Two-dimensional gel protein database of Saccharomyces cerevisiae. Electrophoresis 1996, 17:1683-1699. 10.1002/elps.1150171106, 8982601.
    • (1996) Electrophoresis , vol.17 , pp. 1683-1699
    • Boucherie, H.1    Sagliocco, F.2    Joubert, R.3    Maillet, I.4    Labarre, J.5    Perrot, M.6
  • 7
    • 0033037610 scopus 로고    scopus 로고
    • The heat shock response in yeast: differential regulations and contributions of the Msn2p/Msn4p and Hsf1p regulons
    • 10.1046/j.1365-2958.1999.01467.x, 10411744
    • Boy-Marcotte E, Lagniel G, Perrot M, Bussereau F, Boudsocq A, Jacquet M, Labarre J. The heat shock response in yeast: differential regulations and contributions of the Msn2p/Msn4p and Hsf1p regulons. Mol Microbiol 1999, 33:274-283. 10.1046/j.1365-2958.1999.01467.x, 10411744.
    • (1999) Mol Microbiol , vol.33 , pp. 274-283
    • Boy-Marcotte, E.1    Lagniel, G.2    Perrot, M.3    Bussereau, F.4    Boudsocq, A.5    Jacquet, M.6    Labarre, J.7
  • 9
    • 33845925240 scopus 로고    scopus 로고
    • Genome-wide analysis reveals new roles for the activation domains of the Saccharomyces cerevisiae heat shock transcription factor (Hsf1) during the transient heat shock response
    • 10.1074/jbc.M602454200, 2243236, 16926161
    • Eastmond DL, Nelson HC. Genome-wide analysis reveals new roles for the activation domains of the Saccharomyces cerevisiae heat shock transcription factor (Hsf1) during the transient heat shock response. J Biol Chem 2006, 281:32909-32921. 10.1074/jbc.M602454200, 2243236, 16926161.
    • (2006) J Biol Chem , vol.281 , pp. 32909-32921
    • Eastmond, D.L.1    Nelson, H.C.2
  • 12
    • 2942598422 scopus 로고    scopus 로고
    • Genome-wide analysis of the biology of stress responses through heat shock transcription factor
    • Hahn JS, Hu ZZ, Thiele DJ, Iyer VR. Genome-wide analysis of the biology of stress responses through heat shock transcription factor. Mol Cel Biol 2004, 24:5249-5256.
    • (2004) Mol Cel Biol , vol.24 , pp. 5249-5256
    • Hahn, J.S.1    Hu, Z.Z.2    Thiele, D.J.3    Iyer, V.R.4
  • 13
    • 0033813390 scopus 로고    scopus 로고
    • Stress-controlled transcription factors, stress-induced genes and stress tolerance in budding yeast
    • 10.1111/j.1574-6976.2000.tb00551.x, 10978547
    • Estruch F. Stress-controlled transcription factors, stress-induced genes and stress tolerance in budding yeast. FEMS Microbiol Rev 2000, 24:469-486. 10.1111/j.1574-6976.2000.tb00551.x, 10978547.
    • (2000) FEMS Microbiol Rev , vol.24 , pp. 469-486
    • Estruch, F.1
  • 14
    • 15744382453 scopus 로고    scopus 로고
    • Identification of a novel class of target genes and a novel type of binding sequence of heat shock transcription factor in Saccharomyces cerevisiae
    • 10.1074/jbc.M411256200, 15647283
    • Yamamoto A, Mizukami Y, Sakurai H. Identification of a novel class of target genes and a novel type of binding sequence of heat shock transcription factor in Saccharomyces cerevisiae. J Biol Chem 2005, 280:11911-11919. 10.1074/jbc.M411256200, 15647283.
    • (2005) J Biol Chem , vol.280 , pp. 11911-11919
    • Yamamoto, A.1    Mizukami, Y.2    Sakurai, H.3
  • 15
    • 0033693855 scopus 로고    scopus 로고
    • IRE1 and efferent signaling from the endoplasmic reticulum
    • Urano F, Bertolotti A, Ron D. IRE1 and efferent signaling from the endoplasmic reticulum. J Cell Sci 2000, 113(Pt 21):3697-3702.
    • (2000) J Cell Sci , vol.113 , Issue.PART 21 , pp. 3697-3702
    • Urano, F.1    Bertolotti, A.2    Ron, D.3
  • 18
    • 67949089657 scopus 로고    scopus 로고
    • Exploring temporal transcription regulation structure of Aspergillus fumigatus in heat shock by state space model
    • 10.1186/1471-2164-10-306, 2714559, 19586549
    • Do JH, Yamaguchi R, Miyano S. Exploring temporal transcription regulation structure of Aspergillus fumigatus in heat shock by state space model. BMC Genomics 2009, 10:306. 10.1186/1471-2164-10-306, 2714559, 19586549.
    • (2009) BMC Genomics , vol.10 , pp. 306
    • Do, J.H.1    Yamaguchi, R.2    Miyano, S.3
  • 19
    • 11144260096 scopus 로고    scopus 로고
    • Processing of data generated by 2-dimensional gel electrophoresis for statistical analysis: missing data, normalization, and statistics
    • 10.1021/pr049886m, 15595730
    • Chang J, Van Remmen H, Ward WF, Regnier FE, Richardson A, Cornell J. Processing of data generated by 2-dimensional gel electrophoresis for statistical analysis: missing data, normalization, and statistics. J Proteome Res 2004, 3:1210-1218. 10.1021/pr049886m, 15595730.
    • (2004) J Proteome Res , vol.3 , pp. 1210-1218
    • Chang, J.1    Van Remmen, H.2    Ward, W.F.3    Regnier, F.E.4    Richardson, A.5    Cornell, J.6
  • 21
    • 33751002650 scopus 로고    scopus 로고
    • Normalization and expression changes in predefined sets of proteins using 2D gel electrophoresis: a proteomic study of L-DOPA induced dyskinesia in an animal model of Parkinson's disease using DIGE
    • 10.1186/1471-2105-7-475, 1635739, 17067368
    • Kultima K, Scholz B, Alm H, Skold K, Svensson M, Crossman AR, Bezard E, Andren PE, Lonnstedt I. Normalization and expression changes in predefined sets of proteins using 2D gel electrophoresis: a proteomic study of L-DOPA induced dyskinesia in an animal model of Parkinson's disease using DIGE. BMC Bioinformatics 2006, 7:475. 10.1186/1471-2105-7-475, 1635739, 17067368.
    • (2006) BMC Bioinformatics , vol.7 , pp. 475
    • Kultima, K.1    Scholz, B.2    Alm, H.3    Skold, K.4    Svensson, M.5    Crossman, A.R.6    Bezard, E.7    Andren, P.E.8    Lonnstedt, I.9
  • 22
    • 0037253267 scopus 로고    scopus 로고
    • A novel experimental design for comparative two-dimensional gel analysis: two-dimensional difference gel electrophoresis incorporating a pooled internal standard
    • 10.1002/pmic.200390006, 12548632
    • Alban A, David SO, Bjorkesten L, Andersson C, Sloge E, Lewis S, Currie I. A novel experimental design for comparative two-dimensional gel analysis: two-dimensional difference gel electrophoresis incorporating a pooled internal standard. Proteomics 2003, 3:36-44. 10.1002/pmic.200390006, 12548632.
    • (2003) Proteomics , vol.3 , pp. 36-44
    • Alban, A.1    David, S.O.2    Bjorkesten, L.3    Andersson, C.4    Sloge, E.5    Lewis, S.6    Currie, I.7
  • 23
    • 21244495253 scopus 로고    scopus 로고
    • The development of the DIGE system: 2D fluorescence difference gel analysis technology
    • 10.1007/s00216-005-3126-3, 15900442
    • Marouga R, David S, Hawkins E. The development of the DIGE system: 2D fluorescence difference gel analysis technology. Anal Bioanal Chem 2005, 382:669-678. 10.1007/s00216-005-3126-3, 15900442.
    • (2005) Anal Bioanal Chem , vol.382 , pp. 669-678
    • Marouga, R.1    David, S.2    Hawkins, E.3
  • 24
    • 34247627759 scopus 로고    scopus 로고
    • Two-dimensional fluorescence difference gel electrophoresis for comparative proteomics profiling
    • 10.1038/nprot.2006.256, 2001252, 17487156
    • Tannu NS, Hemby SE. Two-dimensional fluorescence difference gel electrophoresis for comparative proteomics profiling. Nat Protoc 2006, 1:1732-1742. 10.1038/nprot.2006.256, 2001252, 17487156.
    • (2006) Nat Protoc , vol.1 , pp. 1732-1742
    • Tannu, N.S.1    Hemby, S.E.2
  • 25
    • 57649153125 scopus 로고    scopus 로고
    • Difference gel electrophoresis
    • 10.1002/pmic.200800298, 19003860
    • Timms JF, Cramer R. Difference gel electrophoresis. Proteomics 2008, 8:4886-4897. 10.1002/pmic.200800298, 19003860.
    • (2008) Proteomics , vol.8 , pp. 4886-4897
    • Timms, J.F.1    Cramer, R.2
  • 26
    • 34249659456 scopus 로고    scopus 로고
    • Extending the loop design for two-channel microarray experiments
    • 10.1017/S0016672307008476, 17371610
    • Altman NS, Hua J. Extending the loop design for two-channel microarray experiments. Genet Res 2006, 88:153-163. 10.1017/S0016672307008476, 17371610.
    • (2006) Genet Res , vol.88 , pp. 153-163
    • Altman, N.S.1    Hua, J.2
  • 29
    • 33749263098 scopus 로고    scopus 로고
    • Statistical evaluation of methods for the analysis of dynamic protein expression data from a tumor study
    • Jung K, Gannoun A, Sitek B, Apostolov O, Schramm A, Meyer HE, Stühler K, Urfer W. Statistical evaluation of methods for the analysis of dynamic protein expression data from a tumor study. REVSTAT 2006, 4:67-80.
    • (2006) REVSTAT , vol.4 , pp. 67-80
    • Jung, K.1    Gannoun, A.2    Sitek, B.3    Apostolov, O.4    Schramm, A.5    Meyer, H.E.6    Stühler, K.7    Urfer, W.8
  • 32
    • 63049091064 scopus 로고    scopus 로고
    • Integration of transcriptome and proteome data from human-pathogenic fungi by using a data warehouse
    • Albrecht D, Kniemeyer O, Brakhage AA, Berth M, Guthke R. Integration of transcriptome and proteome data from human-pathogenic fungi by using a data warehouse. J Integrative Bioinf 2007, 4:52.
    • (2007) J Integrative Bioinf , vol.4 , pp. 52
    • Albrecht, D.1    Kniemeyer, O.2    Brakhage, A.A.3    Berth, M.4    Guthke, R.5
  • 33
    • 4444322132 scopus 로고    scopus 로고
    • Genome-wide analysis of the effects of heat shock on a Saccharomyces cerevisiae mutant with a constitutively activated cAMP-dependent pathway
    • 10.1002/cfg.415, 2447466, 18629174
    • Jones DL, Petty J, Hoyle DC, Hayes A, Oliver SG, Riba-Garcia I, Gaskell SJ, Stateva L. Genome-wide analysis of the effects of heat shock on a Saccharomyces cerevisiae mutant with a constitutively activated cAMP-dependent pathway. Comp Funct Genomics 2004, 5:419-431. 10.1002/cfg.415, 2447466, 18629174.
    • (2004) Comp Funct Genomics , vol.5 , pp. 419-431
    • Jones, D.L.1    Petty, J.2    Hoyle, D.C.3    Hayes, A.4    Oliver, S.G.5    Riba-Garcia, I.6    Gaskell, S.J.7    Stateva, L.8
  • 35
    • 51649122745 scopus 로고    scopus 로고
    • Temperature-dependent regulation of proteins in Aspergillus flavus: whole organism stable isotope labeling by amino acids
    • 10.1021/pr8001047, 18529071
    • Georgianna DR, Hawkridge AM, Muddiman DC, Payne GA. Temperature-dependent regulation of proteins in Aspergillus flavus: whole organism stable isotope labeling by amino acids. J Proteome Res 2008, 7:2973-2979. 10.1021/pr8001047, 18529071.
    • (2008) J Proteome Res , vol.7 , pp. 2973-2979
    • Georgianna, D.R.1    Hawkridge, A.M.2    Muddiman, D.C.3    Payne, G.A.4
  • 36
    • 61649089217 scopus 로고    scopus 로고
    • Cloning and characterization of two flavohemoglobins from Aspergillus oryzae
    • 10.1016/j.bbrc.2009.01.112, 19351585
    • Zhou S, Fushinobu S, Nakanishi Y, Kim SW, Wakagi T, Shoun H. Cloning and characterization of two flavohemoglobins from Aspergillus oryzae. Biochem Biophys Res Commun 2009, 381:7-11. 10.1016/j.bbrc.2009.01.112, 19351585.
    • (2009) Biochem Biophys Res Commun , vol.381 , pp. 7-11
    • Zhou, S.1    Fushinobu, S.2    Nakanishi, Y.3    Kim, S.W.4    Wakagi, T.5    Shoun, H.6
  • 37
    • 33847718252 scopus 로고    scopus 로고
    • In silico identification of a new group of specific bacterial and fungal nitroreductases-like proteins
    • 10.1016/j.bbrc.2007.02.049, 17331467
    • de Oliveira IM, Henriques JA, Bonatto D. In silico identification of a new group of specific bacterial and fungal nitroreductases-like proteins. Biochem Biophys Res Commun 2007, 355:919-925. 10.1016/j.bbrc.2007.02.049, 17331467.
    • (2007) Biochem Biophys Res Commun , vol.355 , pp. 919-925
    • de Oliveira, I.M.1    Henriques, J.A.2    Bonatto, D.3
  • 38
    • 0035115657 scopus 로고    scopus 로고
    • A type 2A protein phosphatase gene from Aspergillus nidulans is involved in hyphal morphogenesis
    • 10.1007/s002940000177, 11318104
    • Kosmidou E, Lunness P, Doonan JH. A type 2A protein phosphatase gene from Aspergillus nidulans is involved in hyphal morphogenesis. Curr Genet 2001, 39:25-34. 10.1007/s002940000177, 11318104.
    • (2001) Curr Genet , vol.39 , pp. 25-34
    • Kosmidou, E.1    Lunness, P.2    Doonan, J.H.3
  • 39
    • 33744512096 scopus 로고    scopus 로고
    • General repression of RNA polymerase III transcription is triggered by protein phosphatase type 2A-mediated dephosphorylation of Maf1
    • 10.1016/j.molcel.2006.04.008, 16762835
    • Oficjalska-Pham D, Harismendy O, Smagowicz WJ, Gonzalez de Peredo A, Boguta M, Sentenac A, Lefebvre O. General repression of RNA polymerase III transcription is triggered by protein phosphatase type 2A-mediated dephosphorylation of Maf1. Mol Cell 2006, 22:623-632. 10.1016/j.molcel.2006.04.008, 16762835.
    • (2006) Mol Cell , vol.22 , pp. 623-632
    • Oficjalska-Pham, D.1    Harismendy, O.2    Smagowicz, W.J.3    Gonzalez de Peredo, A.4    Boguta, M.5    Sentenac, A.6    Lefebvre, O.7
  • 41
    • 0141920354 scopus 로고    scopus 로고
    • Comparing protein abundance and mRNA expression levels on a genomic scale
    • 10.1186/gb-2003-4-9-117, 193646, 12952525
    • Greenbaum D, Colangelo C, Williams K, Gerstein M. Comparing protein abundance and mRNA expression levels on a genomic scale. Genome Biol 2003, 4:117. 10.1186/gb-2003-4-9-117, 193646, 12952525.
    • (2003) Genome Biol , vol.4 , pp. 117
    • Greenbaum, D.1    Colangelo, C.2    Williams, K.3    Gerstein, M.4
  • 42
    • 0033016717 scopus 로고    scopus 로고
    • Correlation between protein and mRNA abundance in yeast
    • 83965, 10022859
    • Gygi SP, Rochon Y, Franza BR, Aebersold R. Correlation between protein and mRNA abundance in yeast. Mol Cell Biol 1999, 19:1720-1730. 83965, 10022859.
    • (1999) Mol Cell Biol , vol.19 , pp. 1720-1730
    • Gygi, S.P.1    Rochon, Y.2    Franza, B.R.3    Aebersold, R.4
  • 43
    • 55049118189 scopus 로고    scopus 로고
    • Identifying gene regulatory modules of heat shock response in yeast
    • 10.1186/1471-2164-9-15, 2249575, 18194529
    • Wu WS, Li WH. Identifying gene regulatory modules of heat shock response in yeast. BMC Genomics 2008, 9:15. 10.1186/1471-2164-9-15, 2249575, 18194529.
    • (2008) BMC Genomics , vol.9 , pp. 15
    • Wu, W.S.1    Li, W.H.2
  • 44
    • 47049121708 scopus 로고    scopus 로고
    • Regulation of thermotolerance by stress-induced transcription factors in Saccharomyces cerevisiae
    • 10.1128/EC.00029-08, 2394977, 18359875
    • Yamamoto N, Maeda Y, Ikeda A, Sakurai H. Regulation of thermotolerance by stress-induced transcription factors in Saccharomyces cerevisiae. Eukaryot Cell 2008, 7:783-790. 10.1128/EC.00029-08, 2394977, 18359875.
    • (2008) Eukaryot Cell , vol.7 , pp. 783-790
    • Yamamoto, N.1    Maeda, Y.2    Ikeda, A.3    Sakurai, H.4
  • 45
    • 33747839468 scopus 로고    scopus 로고
    • ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins
    • 10.1093/nar/gkl124, 1538847, 16845026
    • de Castro E, Sigrist CJ, Gattiker A, Bulliard V, Langendijk-Genevaux PS, Gasteiger E, Bairoch A, Hulo N. ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins. Nucleic Acids Res 2006, 34:W362-365. 10.1093/nar/gkl124, 1538847, 16845026., http://www.expasy.ch/tools/scanprosite
    • (2006) Nucleic Acids Res , vol.34
    • de Castro, E.1    Sigrist, C.J.2    Gattiker, A.3    Bulliard, V.4    Langendijk-Genevaux, P.S.5    Gasteiger, E.6    Bairoch, A.7    Hulo, N.8
  • 46
    • 33747823564 scopus 로고    scopus 로고
    • MEME: discovering and analyzing DNA and protein sequence motifs
    • 10.1093/nar/gkl198, 1538909, 16845028
    • Bailey TL, Williams N, Misleh C, Li WW. MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Res 2006, 34:W369-373. 10.1093/nar/gkl198, 1538909, 16845028., http://meme.sdsc.edu/meme/
    • (2006) Nucleic Acids Res , vol.34
    • Bailey, T.L.1    Williams, N.2    Misleh, C.3    Li, W.W.4
  • 47
    • 33746234890 scopus 로고    scopus 로고
    • The AP-2 family of transcription factors
    • 10.1186/gb-2005-6-13-246, 1414101, 16420676
    • Eckert D, Buhl S, Weber S, Jager R, Schorle H. The AP-2 family of transcription factors. Genome Biol 2005, 6:246. 10.1186/gb-2005-6-13-246, 1414101, 16420676.
    • (2005) Genome Biol , vol.6 , pp. 246
    • Eckert, D.1    Buhl, S.2    Weber, S.3    Jager, R.4    Schorle, H.5
  • 49
    • 4544270574 scopus 로고    scopus 로고
    • DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results
    • 10.1093/bioinformatics/bth193, 15044229
    • Kreil DP, Karp NA, Lilley KS. DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results. Bioinformatics 2004, 20:2026-2034. 10.1093/bioinformatics/bth193, 15044229.
    • (2004) Bioinformatics , vol.20 , pp. 2026-2034
    • Kreil, D.P.1    Karp, N.A.2    Lilley, K.S.3
  • 50
    • 33644888842 scopus 로고    scopus 로고
    • Fungal heat-shock proteins in human disease
    • 10.1111/j.1574-6976.2005.00001.x, 16438680
    • Burnie JP, Carter TL, Hodgetts SJ, Matthews RC. Fungal heat-shock proteins in human disease. FEMS Microbiol Rev 2006, 30:53-88. 10.1111/j.1574-6976.2005.00001.x, 16438680.
    • (2006) FEMS Microbiol Rev , vol.30 , pp. 53-88
    • Burnie, J.P.1    Carter, T.L.2    Hodgetts, S.J.3    Matthews, R.C.4
  • 51
    • 12244267727 scopus 로고    scopus 로고
    • Global transcriptional responses of fission yeast to environmental stress
    • 10.1091/mbc.E02-08-0499, 140239, 12529438
    • Chen D, Toone WM, Mata J, Lyne R, Burns G, Kivinen K, Brazma A, Jones N, Bahler J. Global transcriptional responses of fission yeast to environmental stress. Mol Biol Cell 2003, 14:214-229. 10.1091/mbc.E02-08-0499, 140239, 12529438.
    • (2003) Mol Biol Cell , vol.14 , pp. 214-229
    • Chen, D.1    Toone, W.M.2    Mata, J.3    Lyne, R.4    Burns, G.5    Kivinen, K.6    Brazma, A.7    Jones, N.8    Bahler, J.9
  • 52
    • 0036810352 scopus 로고    scopus 로고
    • Heat-shock protein 90, a chaperone for folding and regulation
    • 10.1007/PL00012491, 12475174
    • Picard D. Heat-shock protein 90, a chaperone for folding and regulation. Cell Mol Life Sci 2002, 59:1640-1648. 10.1007/PL00012491, 12475174.
    • (2002) Cell Mol Life Sci , vol.59 , pp. 1640-1648
    • Picard, D.1
  • 53
    • 34249746426 scopus 로고    scopus 로고
    • Genomic analysis of allergen genes in Aspergillus spp: the relevance of genomics to everyday research
    • 10.1080/13693780600972907, 17325940
    • Bowyer P, Denning DW. Genomic analysis of allergen genes in Aspergillus spp: the relevance of genomics to everyday research. Med Mycol 2007, 45:17-26. 10.1080/13693780600972907, 17325940.
    • (2007) Med Mycol , vol.45 , pp. 17-26
    • Bowyer, P.1    Denning, D.W.2
  • 54
    • 33846637430 scopus 로고    scopus 로고
    • Identification of OS-2 MAP kinase-dependent genes induced in response to osmotic stress, antifungal agent fludioxonil, and heat shock in Neurospora crassa
    • 10.1016/j.fgb.2006.08.003, 16990038
    • Noguchi R, Banno S, Ichikawa R, Fukumori F, Ichiishi A, Kimura M, Yamaguchi I, Fujimura M. Identification of OS-2 MAP kinase-dependent genes induced in response to osmotic stress, antifungal agent fludioxonil, and heat shock in Neurospora crassa. Fungal Genet Biol 2007, 44:208-218. 10.1016/j.fgb.2006.08.003, 16990038.
    • (2007) Fungal Genet Biol , vol.44 , pp. 208-218
    • Noguchi, R.1    Banno, S.2    Ichikawa, R.3    Fukumori, F.4    Ichiishi, A.5    Kimura, M.6    Yamaguchi, I.7    Fujimura, M.8
  • 55
    • 0032722561 scopus 로고    scopus 로고
    • Disruption of the gene for Hsp30, an alpha-crystallin-related heat shock protein of Neurospora crassa, causes defects in import of proteins into mitochondria
    • 10.1515/BC.1999.156, 10595587
    • Plesofsky N, Gardner N, Lill R, Brambl R. Disruption of the gene for Hsp30, an alpha-crystallin-related heat shock protein of Neurospora crassa, causes defects in import of proteins into mitochondria. Biol Chem 1999, 380:1231-1236. 10.1515/BC.1999.156, 10595587.
    • (1999) Biol Chem , vol.380 , pp. 1231-1236
    • Plesofsky, N.1    Gardner, N.2    Lill, R.3    Brambl, R.4
  • 56
    • 37549013791 scopus 로고    scopus 로고
    • The Aspergillus fumigatus transcriptional regulator AfYap1 represents the major regulator for defense against reactive oxygen intermediates but is dispensable for pathogenicity in an intranasal mouse infection model
    • 10.1128/EC.00267-07, 2168236, 17921349
    • Lessing F, Kniemeyer O, Wozniok I, Loeffler J, Kurzai O, Haertl A, Brakhage AA. The Aspergillus fumigatus transcriptional regulator AfYap1 represents the major regulator for defense against reactive oxygen intermediates but is dispensable for pathogenicity in an intranasal mouse infection model. Eukaryot Cell 2007, 6:2290-2302. 10.1128/EC.00267-07, 2168236, 17921349.
    • (2007) Eukaryot Cell , vol.6 , pp. 2290-2302
    • Lessing, F.1    Kniemeyer, O.2    Wozniok, I.3    Loeffler, J.4    Kurzai, O.5    Haertl, A.6    Brakhage, A.A.7
  • 57
    • 0034685892 scopus 로고    scopus 로고
    • The Yap1p-dependent induction of glutathione synthesis in heat shock response of Saccharomyces cerevisiae
    • 10.1074/jbc.275.20.15535, 10809786
    • Sugiyama K, Izawa S, Inoue Y. The Yap1p-dependent induction of glutathione synthesis in heat shock response of Saccharomyces cerevisiae. J Biol Chem 2000, 275:15535-15540. 10.1074/jbc.275.20.15535, 10809786.
    • (2000) J Biol Chem , vol.275 , pp. 15535-15540
    • Sugiyama, K.1    Izawa, S.2    Inoue, Y.3
  • 58
    • 34250309182 scopus 로고    scopus 로고
    • Interaction between heat shock transcription factors (HSFs) and divergent binding sequences: binding specificities of yeast HSFs and human HSF1
    • 10.1074/jbc.M611801200, 17347150
    • Sakurai H, Takemori Y. Interaction between heat shock transcription factors (HSFs) and divergent binding sequences: binding specificities of yeast HSFs and human HSF1. J Biol Chem 2007, 282:13334-13341. 10.1074/jbc.M611801200, 17347150.
    • (2007) J Biol Chem , vol.282 , pp. 13334-13341
    • Sakurai, H.1    Takemori, Y.2
  • 59
    • 0032030784 scopus 로고    scopus 로고
    • Importance of glucose-6-phosphate dehydrogenase in the adaptive response to hydrogen peroxide in Saccharomyces cerevisiae
    • 1219210, 9480895
    • Izawa S, Maeda K, Miki T, Mano J, Inoue Y, Kimura A. Importance of glucose-6-phosphate dehydrogenase in the adaptive response to hydrogen peroxide in Saccharomyces cerevisiae. Biochem J 1998, 330(Pt 2):811-817. 1219210, 9480895.
    • (1998) Biochem J , vol.330 , Issue.PART 2 , pp. 811-817
    • Izawa, S.1    Maeda, K.2    Miki, T.3    Mano, J.4    Inoue, Y.5    Kimura, A.6
  • 60
    • 0028348777 scopus 로고
    • Stress tolerance and membrane lipid unsaturation in Saccharomyces cerevisiae grown aerobically or anaerobically
    • 10.1099/00221287-140-3-569, 8012580
    • Steels EL, Learmonth RP, Watson K. Stress tolerance and membrane lipid unsaturation in Saccharomyces cerevisiae grown aerobically or anaerobically. Microbiology 1994, 140(Pt 3):569-576. 10.1099/00221287-140-3-569, 8012580.
    • (1994) Microbiology , vol.140 , Issue.PART 3 , pp. 569-576
    • Steels, E.L.1    Learmonth, R.P.2    Watson, K.3
  • 61
    • 67349271568 scopus 로고    scopus 로고
    • Gaining insight into the response logic of Saccharomyces cerevisiae to heat shock by combining expression profiles with metabolic pathways
    • 10.1016/j.bbrc.2009.05.071, 19463789
    • Ye Y, Zhu Y, Pan L, Li L, Wang X, Lin Y. Gaining insight into the response logic of Saccharomyces cerevisiae to heat shock by combining expression profiles with metabolic pathways. Biochem Biophys Res Commun 2009, 385:357-362. 10.1016/j.bbrc.2009.05.071, 19463789.
    • (2009) Biochem Biophys Res Commun , vol.385 , pp. 357-362
    • Ye, Y.1    Zhu, Y.2    Pan, L.3    Li, L.4    Wang, X.5    Lin, Y.6
  • 62
    • 33749244908 scopus 로고    scopus 로고
    • Translation-independent inhibition of mRNA deadenylation during stress in Saccharomyces cerevisiae
    • 10.1261/rna.241006, 1581975, 16940550
    • Hilgers V, Teixeira D, Parker R. Translation-independent inhibition of mRNA deadenylation during stress in Saccharomyces cerevisiae. RNA 2006, 12:1835-1845. 10.1261/rna.241006, 1581975, 16940550.
    • (2006) RNA , vol.12 , pp. 1835-1845
    • Hilgers, V.1    Teixeira, D.2    Parker, R.3
  • 63
    • 49649096905 scopus 로고    scopus 로고
    • Heat shock and ethanol stress provoke distinctly different responses in 3'-processing and nuclear export of HSP mRNA in Saccharomyces cerevisiae
    • 10.1042/BJ20071567, 18442359
    • Izawa S, Kita T, Ikeda K, Inoue Y. Heat shock and ethanol stress provoke distinctly different responses in 3'-processing and nuclear export of HSP mRNA in Saccharomyces cerevisiae. Biochem J 2008, 414:111-119. 10.1042/BJ20071567, 18442359.
    • (2008) Biochem J , vol.414 , pp. 111-119
    • Izawa, S.1    Kita, T.2    Ikeda, K.3    Inoue, Y.4
  • 64
    • 0032717193 scopus 로고    scopus 로고
    • The mitochondrial cytochrome c peroxidase Ccp1 of Saccharomyces cerevisiae is involved in conveying an oxidative stress signal to the transcription factor Pos9 (Skn7)
    • 10.1007/s004380051103, 10589830
    • Charizanis C, Juhnke H, Krems B, Entian KD. The mitochondrial cytochrome c peroxidase Ccp1 of Saccharomyces cerevisiae is involved in conveying an oxidative stress signal to the transcription factor Pos9 (Skn7). Mol Gen Genet 1999, 262:437-447. 10.1007/s004380051103, 10589830.
    • (1999) Mol Gen Genet , vol.262 , pp. 437-447
    • Charizanis, C.1    Juhnke, H.2    Krems, B.3    Entian, K.D.4
  • 66
    • 0030863057 scopus 로고    scopus 로고
    • Deletion of nudC, a nuclear migration gene of Aspergillus nidulans, causes morphological and cell wall abnormalities and is lethal
    • 305733, 9307970
    • Chiu YH, Xiang X, Dawe AL, Morris NR. Deletion of nudC, a nuclear migration gene of Aspergillus nidulans, causes morphological and cell wall abnormalities and is lethal. Mol Biol Cell 1997, 8:1735-1749. 305733, 9307970.
    • (1997) Mol Biol Cell , vol.8 , pp. 1735-1749
    • Chiu, Y.H.1    Xiang, X.2    Dawe, A.L.3    Morris, N.R.4
  • 67
    • 67649232966 scopus 로고    scopus 로고
    • The microtubule-associated protein, NUD-1, exhibits chaperone activity in vitro
    • 10.1007/s12192-008-0061-1, 2673900, 18626791
    • Faircloth LM, Churchill PF, Caldwell GA, Caldwell KA. The microtubule-associated protein, NUD-1, exhibits chaperone activity in vitro. Cell Stress Chaperones 2009, 14:95-103. 10.1007/s12192-008-0061-1, 2673900, 18626791.
    • (2009) Cell Stress Chaperones , vol.14 , pp. 95-103
    • Faircloth, L.M.1    Churchill, P.F.2    Caldwell, G.A.3    Caldwell, K.A.4
  • 68
    • 0031861605 scopus 로고    scopus 로고
    • Development of a homologous transformation system for the human pathogenic fungus Aspergillus fumigatus based on the pyrG gene encoding orotidine 5'-monophosphate decarboxylase
    • 10.1007/s002940050350, 9618589
    • Weidner G, d'Enfert C, Koch A, Mol PC, Brakhage AA. Development of a homologous transformation system for the human pathogenic fungus Aspergillus fumigatus based on the pyrG gene encoding orotidine 5'-monophosphate decarboxylase. Curr Genet 1998, 33:378-385. 10.1007/s002940050350, 9618589.
    • (1998) Curr Genet , vol.33 , pp. 378-385
    • Weidner, G.1    d'Enfert, C.2    Koch, A.3    Mol, P.C.4    Brakhage, A.A.5
  • 69
    • 33644560315 scopus 로고    scopus 로고
    • Optimisation of a 2-D gel electrophoresis protocol for the human-pathogenic fungus Aspergillus fumigatus
    • 10.1007/s00294-005-0047-9, 16362819
    • Kniemeyer O, Lessing F, Scheibner O, Hertweck C, Brakhage AA. Optimisation of a 2-D gel electrophoresis protocol for the human-pathogenic fungus Aspergillus fumigatus. Curr Genet 2006, 49:178-189. 10.1007/s00294-005-0047-9, 16362819.
    • (2006) Curr Genet , vol.49 , pp. 178-189
    • Kniemeyer, O.1    Lessing, F.2    Scheibner, O.3    Hertweck, C.4    Brakhage, A.A.5
  • 70
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • 10.1016/0003-2697(76)90527-3, 942051
    • Bradford MM. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 1976, 72:248-254. 10.1016/0003-2697(76)90527-3, 942051.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 71
    • 0023931883 scopus 로고
    • Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250
    • 10.1002/elps.1150090603, 2466658
    • Neuhoff V, Arold N, Taube D, Ehrhardt W. Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250. Electrophoresis 1988, 9:255-262. 10.1002/elps.1150090603, 2466658.
    • (1988) Electrophoresis , vol.9 , pp. 255-262
    • Neuhoff, V.1    Arold, N.2    Taube, D.3    Ehrhardt, W.4
  • 73
    • 63049083694 scopus 로고    scopus 로고
    • Two-dimensional proteome reference maps for the human pathogenic filamentous fungus Aspergillus fumigatus
    • 10.1002/pmic.200800394, 19253289
    • Vödisch M, Albrecht D, Lessing F, Schmidt AD, Winkler R, Guthke R, Brakhage AA, Kniemeyer O. Two-dimensional proteome reference maps for the human pathogenic filamentous fungus Aspergillus fumigatus. Proteomics 2009, 9:1407-1415. 10.1002/pmic.200800394, 19253289.
    • (2009) Proteomics , vol.9 , pp. 1407-1415
    • Vödisch, M.1    Albrecht, D.2    Lessing, F.3    Schmidt, A.D.4    Winkler, R.5    Guthke, R.6    Brakhage, A.A.7    Kniemeyer, O.8
  • 74
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Ser B 1995, 57:289-300.
    • (1995) J R Stat Soc Ser B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.