Expressions and dimerization affinities of three highly identical APETALA3 genes in Brassica napus

Biologia Plantarum

Volumn 54, Issue 1, 2010, Pages 33-40

  Zhou, L ^a   Zhou, Y T ^a   Wang, M L ^a   Wang, H Y ^a   Zhao, Y ^a  

^a SICHUAN UNIVERSITY   (China)

Author keywords

Gene duplication; Rape; Real time quantitative PCR; Yeast two hybrid assays

Indexed keywords

BRASSICA NAPUS;

EID: 76649095682     PISSN: 00063134     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10535-010-0005-3     Document Type: Article

References (36)

1. Blanc, G., Wolfe, K. H.: Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes. - Plant Cell 16: 1667-1678, 2004.
2. Bodt, S., Maere, S., Peer, Y. V.: Genome duplication and the origin of angiosperms. - Trends Ecol. Evol. 20: 591-597, 2005.
3. Bowman, J. L., Smyth, D. R., Meyerowitz, E. M.: Genes directing flower development in Arabidopsis. - Plant Cell 1: 37-52, 1989.
4. Bowman, J. L., Smyth, D. R., Meyerowitz, E. M.: Genetic interactions among floral homeotic genes of Arabidopsis. - Development 112: 1-20, 1991.
5. Cui, L., Wall, P. K., Leebens-Mack, J. H., Lindsay, B. G., Soltis, D. E., Doyle, J. J., Soltis, P. S., Carlson, J. E., Arumuganathan, K., Barakat, A., Albert, V. A., Ma, H., De Pamphilis, C. W.: Widespread genome duplications throughout the history of flowering plants. - Genome Res. 16: 738-749, 2006.
6. Duarte, J. M., Cui, L., Wall, P. K., Zhang, Q., Zhang, X., Leebens-Mack, J., Ma, H., Altman, N., De Pamphilis, C. W.: Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. - Mol. Biol. Evol. 23: 469-478, 2006.
7. Force, A., Lynch, M., Pickett, F. B., Amores, A., Yan, Y. L., Postlethwait, J.: Preservation of duplicate genes by complementary, degenerative mutations. - Genetics 151: 1531-1545, 1999.
8. Goto, K., Meyerowitz, E. M.: Function and regulation of the Arabidopsis floral homeotic gene PISTILLATA. - Genes Dev. 8: 1548-1560, 1994.
9. Honma, T., Goto, K.: The Arabidopsis floral homeotic gene PISTILLATA is regulated by discrete cis-elements responsive to induction and maintenance signals. - Development 127: 2021-2030, 2000.
10. Irish, V. F., Litt, A.: Flower development and evolution: gene duplication, diversification and redeployment. - Curr. Opin. Genet. Dev. 15: 454-460, 2005.
11. Jack, T.: Relearning our ABCs: new twists on an old model. - Trends Plant Sci. 6: 310-316, 2001.
12. Jack, T., Brockman, L. L., Meyerowitz, E. M.: The homeotic gene APETALA3 of Arabidopsis thaliana encodes a MADS box and is expressed in petals and stamens. - Cell 68: 683-697, 1992.
13. Jack, T., Fox, G. L., Meyerowitz, E. M.: Arabidopsis homeotic gene APETALA3 ectopic expression: transcriptional and posttranscriptional regulation determine floral organ identity. - Cell 76: 703-716, 1994.
14. Kramer, E. M., Dorit, R. L., Irish, V. F.: Molecular evolution of genes controlling petal and stamen development: duplication and divergence within the APETALA3 and PISTILLATA MADS-box gene lineages. - Genetics 149: 765-783, 1998.
15. Kramer, E. M., Holappa, L., Gould, B., Jaramillo, M. A., Setnikov, D., Santiago, P. M.: Elaboration of B gene function to include the identity of novel floral organs in the lower eudicot Aquilegia. - Plant Cell 19: 750-766, 2007.
16. Kramer, E. M., Irish, V. F.: Evolution of the petal and stamen developmental programs: evidence from comparative studies of the lower eudicots and basal angiosperms. - Int. J. Plant Sci. 16: 29-30, 2000.
17. Krizek, B. A., Fletcher, J. C.: Molecular mechanisms of flower development: an armchair guide. - Nature 42: 688-698, 2005.
18. Krizek, B. A., Meyerowitz, E. M.: The Arabidopsis homeotic genes APETALA3 and PISTILLATA are sufficient to provide the B class organ identity function. - Development 122: 11-22, 1996.
19. Lamb, R. S., Irish, V. F. L.: Functional divergence within the APETALA3/PISTILLATA floral homeotic gene lineages. - Proc. nat. Acad. Sci. USA 100: 6558-6563, 2003.
20. Lewis, E. B.: Pseudoallelism and gene evolution. - Cold Spring Harb. Symp Quant. Biol. 16: 159-174, 1951.
21. Lynch, M., Conery, J. S.: The evolutionary fate and consequences of duplicate genes. - Science 290: 1151-1155, 2000.
22. McGonigle, B., Bouhideland, K., Irish, V. F.: Nuclear localization of the Arabidopsis APETALA3 and PISTILLATA homeotic gene products depends on their simultaneous expression. - Genes Dev. 10: 1812-1821, 1996.
23. Nagahara, U.: Genome analysis in Brassica with special reference to the experimental formation of B. napus and peculiar mode of fertilisation. - J. jap. Bot. 7: 389-452, 1935.
24. Ohno, S.: Evolution by Gene Duplication. - Springer-Verlag, Berlin - New York 1970.
25. Palmer, J. D., Shields, C. R., Cohen, D. B., Orton, T. J.: Chloroplast DNA evolution and the origin of amphidiploid Brassica species. - Theor. appl. Genet. 65: 181-189, 1983.
26. Parkin, I. A. P., Sharpe, A. G., Keith, D. J., Lydiate, D. J.: Identification of the A and C genomes of the amphidiploid Brassica napus (oilseed rape). - Genome 38: 1122-1131, 1995.
27. Pylatuik, J. D., Lindsay, D. L., Davis, A. R., Bonham-Smith, P. C.: Isolation and characterization of a Brassica napus cDNA corresponding to a B-class floral development gene. - J. exp. Bot. 54: 2385-2387, 2003.
28. Riechmann, J. L., Krizek, B. A., Meyerowitz, E. M.: Dimerization specificity of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA, and AGAMOUS. - Proc. nat. Acad. Sci. USA 93: 4793-4798, 1996b.
29. Riechmann, J. L., Wang, M., Meyerowitz, E. M.: DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. - Nucl. Acids Res. 24: 3134-3141, 1996a.
30. Schmidt, R., Acarkan, A., Boivin, K.: Comparative structural genomics in the Brassicaceae family. - Plant Physiol. Biochem. 39: 253-262, 2001.
31. Vandenbussche, M., Zethof, J., Royaert, S., Weterings, K., Gerats, T.: The duplicated B-class heterodimer model: whorl specific effects and complex genetic interactions in Petunia hybrida flower development. - Plant Cell 16: 741-754, 2004.
32. Wagner, A.: The fate of duplicated genes: loss or new function? - Bioessays 20: 785-788, 1998.
33. Yadav, S. R., Prasad, K., Vijayraghavan, U.: Divergent regulatory OsMADS2 functions control size, shape and differentiation of the highly derived rice floret second whorl organ. - Genetics 176: 283-294, 2007.
34. Yang, Y., Fanning, L., Jack, T.: The K domain mediates heterodimerization of the Arabidopsis floral organ identity proteins, APETALA3 and PISTILLATA. - Plant J. 33: 47-59, 2003.
35. Zachgo, S., Andrade, S. E., Motte, P., Trobner, W., Saedler, H., Schwarz-Sommer, Z.: Functional analysis of the Antirrhinum floral homeotic deficiens gene in vivo and in vitro by using a temperature-sensitive mutant. - Development 121: 2861-2875, 1995.
36. Zhao, Y., Wang, M. L.: Inheritance and agronomic performance of an apetalous flower mutant in Brassica napus L. - Euphytica 137: 381-386, 2004.