Comparative analysis of diversity based on morpho-agronomic traits and microsatellite markers in common bean

Euphytica

Volumn 170, Issue 3, 2009, Pages 249-262

  Kumar, Vipin ^a   Sharma, Shailendra ^b   Sharma, Amit Kumar ^a   Sharma, Shiveta ^c   Bhat, K Venkataramana ^d  

^a SARDAR VALLABHBHAI PATEL UNIVERSITY OF AGRICULTURE AND TECHNOLOGY   (India)

^b Sardar Vallabh Bhai Patel University of Agriculture   (India)

^c BANARAS HINDU UNIVERSITY   (India)

^d NATIONAL BUREAU OF PLANT GENETIC RESOURCES   (India)

Author keywords

Common bean; Euclidean distance; Genetic diversity; Mantel test; Microsatellites; PCO; Phaseolus vulgaris L

Indexed keywords

PHASEOLUS VULGARIS;

EID: 76149117186     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-009-9965-9     Document Type: Article

References (38)

1. Acosta-Gallegos JA, Kelly JD, Gepts P (2007) Prebreeding in common bean and use of genetic diversity from wild germplasm. Crop Sci 47: 44-59. doi: 10. 2135/cropsci2007. 04. 0008IPBS.
2. Anand LJ, Murty BR (1968) Genetic divergence and hybrid performance in linseed. Indian J Genet 28: 178-185.
3. Arunachalam V (1981) Genetic distance in plant breeding. Indian J Genet 41: 226-236.
4. Benchimol LL, Campos T, De Carbonell SAM, Colombo CA, Chioratto AF, Formighieri EFL, Gouve RM, Souza APD (2007) Structure of genetic diversity among common bean (Phaseolus vulgaris L.) varieties of Mesoamerican and Andean origins using new developed microsatellite markers. Genet Resour Crop Evol 54: 1747-1762. doi: 10. 1007/s10722-006-9184-3.
5. Blair MW, Giraldo MC, Buendia Tovar HFE, Duque MC, Beebe SE (2006) Microsatellite marker diversity in common bean (Phaseolus vulgaris L.). Theor Appl Genet 113: 100-109. doi: 10. 1007/s00122-006-0276-4.
6. Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32: 314-331.
7. Campos TD, Benchimol LL, Augusto S, Carbonell M, Chioratto AF, Formighieri EF, de Souza AP (2007) Microsatellites for genetic studies and breeding programs in common bean. Pesq Agropec Bras Brasilia 42: 589-592.
8. Debouck D (1991) Systematics and morphology. In: van Schoonhoven A, Voysest O (eds) Common beans: research for crop improvement. Commonwealth Agricultural Bureaux International, Wallingford, pp 55-118.
9. FAO (2003) Production Yearbook, vol 56, pp 109-110.
10. Galvan MZ, Menendez-Sevillano MC, De Ron AM, Santalla M, Balatti PA (2006) Genetic diversity among wild common beans from north-western Argentina based on morpho-agronomic and RAPD data. Genet Resour Crop Evol 53: 891-900. doi: 10. 1007/s10722-004-0981-2.
11. Gepts P, Bliss FA (1988) Dissemination pathways of common bean (Phaseolus vulgaris, Fabaceae) deduced from phaseolin electrophoretic variability. II. Europe and Africa. Econ Bot 42: 86-104.
12. Gepts P, Kmiecik K, Pereira P, Bliss FA (1988) Dissemination pathways of common bean (Phaseolus vulgaris, Fabaceae) deduced from phaseolin electrophoretic variability. I. The Americas. Econ Bot 42: 73-85.
13. Gupta MP, Singh KB (1970) Genetic divergence for yield and its components in green gram. Indian J Genet 30: 212-221.
14. Gupta PK, Varshney RK (2000) The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat. Euphytica 113: 163-185. doi: 10. 1023/A: 1003910819967.
15. Jaccard P (1908) Nouvelles recherches sur la distribution florale. Bull Soc Vaudoise Sci Nat 44: 223-270.
16. Joshi AB, Dhawan NL (1996) Genetic improvement of yield with special reference to self-fertilizing crops. Indian J Genet 26: 101-113.
17. Karp A, Krosorich S, Bhat KV, Ayod IVG, Hodgin T (1997) Molecular tools in plant genetics resources conservation: A guide to technologies. Technical Bulletin no. 2, pp 13-29.
18. Kumar V, Sharma S, Kero S, Sharma S, Sharma AK, Kumar M, Bhat KV (2008a) Assessment of genetic diversity in common bean (Phaseolus vulgaris L.) germplasm using amplified fragment length polymorphism (AFLP). Sci Horti 116: 138-143. doi: 10. 1016/j. scienta. 2007. 12. 001.
19. Kumar V, Sharma S, Sharma AK, Kumar M, Sharma S, Malik S, Singh KP, Sanger RS, Bhat KV (2008b) Assessment of genetic diversity in Indian common bean (Phaseolus vulgaris L.) varieties using random amplified polymorphic DNA (RAPD) markers. Physiol Mol Bio Plant 14: 383-387. doi: 10. 1007/s12298-008-0038-7.
20. Malhotra V, Singh VS, Singh KB (1974) Relation between geographic diversity and genetic divergence in green gram. Indian J Agric Sci 44: 815-818.
21. Mantel NA (1967) The detection of disease clustering and generalized regression approach. Cancer Res 27: 209-220.
22. Metais I, Hamon B, Jalouzot R, Peltier D (2002) Structure and level of genetic diversity in various bean types with microsatellite markers isolated from a genomic enriched library. Theor Appl Genet 104: 1346-1352. doi: 10. 1007/s00122-002-0901-9.
23. Miller JC, Tanksley SD (1990) RFLP analysis of phylogenetic relationships and genetic variation in the genus Lycopersicon. Theor Appl Genet 80: 437-448.
24. Murty BR (1965) Heterosis and combining ability in relation to genetic divergence in flue cured tobacco. Indian J Genet 25: 46-56.
25. Murty BR, Arunachalam V (1966) The nature of genetic divergence in relation to breeding system in crop plants. Indian J Genet 26: 188-189.
26. Naidu NV, Satyanarayana A (1991) Studies on genetic divergence over environments in mung bean. Indian J Genet 51: 454-460.
27. Ramanjulu V, Reddy DR, Babu GP, Gopal K (1999) Identification of source of resistance to bean common masaic virus in common bean (Phaseolus vulgaris L.). Pl Des Res 19: 134-136.
28. Ramirez M, Graham MA, Blanco-Lo'pez L, Silvente S, Medrano A, Blair MW, Hernandez G, Vance CP, Lara M (2005) Sequencing and analysis of common bean ESTs. Building a foundation for functional genomics. Plant Physiol 137: 1211-1227. doi: 10. 1104/pp. 104. 054999.
29. Rao CR (1952) Advanced statistical methods in biometric research, John Wiley & Sons, New York, 390 pp.
30. Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer length polymorphism in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc Natl Acad Sci USA 83: 1757-1761.
31. Simmonds NW (1976) Evolution of crop plants. Longman, London.
32. Singh SP (2001) Broadening the genetic base of common bean cultivars: a review. Crop Sci 41: 1659-1675.
33. Singh NK, Tiwari M, Kumar N (2002) Seed protein studies in common bean (Phaseolus vulgaris L.) gremplasm grown at high altitude. Indian J Genet 63: 267-268.
34. Singh SP, Teran H, Lema M, Webster DM, Strausbaugh CA, Miklas PN, Schwartz HF, Brick MA (2007) Seventy-five years of breeding dry bean of the Western USA. Crop Sci 47: 981-989.
35. Sneath PHA, Sokal RR (1973) Numerical taxonomy. Freeman, San Francisco.
36. Sousa SM, Delgado A (1993) Mexican Leguminosae: phytogeography, endemism and origins. In: Ramamoorthy TP, Bye RA, Lot J, Fa J (eds) Biological diversity of Mexico. Oxford University Press, New York, pp 459-511.
37. Zeven AC (1997) The introduction of the common bean (Phaseolus vulgaris L.) into Western Europe and the phenotypic variation of dry beans collected in The Netherlands in 1946. Euphytica 94: 19-328.
38. Zeven AC, Waninge J, Singh SP, Hintum TV (1999) Phenotypic variation in a core collection in common bean (Phaseolus vulgaris L.) in the Netherlands. Euphytica 109: 93-106. doi: 10. 1023/A: 1003665408567.