-
1
-
-
0037517063
-
The NFP locus of Medicago truncatula controls an early step of Nod factor signal transduction upstream of a rapid calcium flux and root hair deformation
-
Amor BB, Shaw SL, Oldroyd GE, Maillet F, Penmetsa RV, Cook D, Long SR, Denarie J, Gough C (2003) The NFP locus of Medicago truncatula controls an early step of Nod factor signal transduction upstream of a rapid calcium flux and root hair deformation. Plant J 34: 495-506
-
(2003)
Plant J
, vol.34
, pp. 495-506
-
-
Amor, B.B.1
Shaw, S.L.2
Oldroyd, G.E.3
Maillet, F.4
Penmetsa, R.V.5
Cook, D.6
Long, S.R.7
Denarie, J.8
Gough, C.9
-
2
-
-
17644371012
-
Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by serial analysis of gene expression
-
Asamizu E, Nakamura Y, Sato S, Tabata S (2005) Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by serial analysis of gene expression. Mol Plant Microbe Interact 18: 487-498
-
(2005)
Mol Plant Microbe Interact
, vol.18
, pp. 487-498
-
-
Asamizu, E.1
Nakamura, Y.2
Sato, S.3
Tabata, S.4
-
3
-
-
9344251110
-
A dual-genome symbiosis chip for coordinate study of signal exchange and development in a prokaryote-host interaction
-
Barnett MJ, Toman CJ, Fisher RF, Long SR (2004) A dual-genome symbiosis chip for coordinate study of signal exchange and development in a prokaryote-host interaction. Proc Natl Acad Sci USA 101: 16636-16641
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 16636-16641
-
-
Barnett, M.J.1
Toman, C.J.2
Fisher, R.F.3
Long, S.R.4
-
4
-
-
47849128399
-
A gene expression atlas of the model legume Medicago truncatula
-
Benedito VA, Torres-Jerez I, Murray JD, Andriankaja A, Allen S, Kakar K, Wandrey M, Verdier J, Zuber H, Ott T, et al (2008) A gene expression atlas of the model legume Medicago truncatula. Plant J 55: 504-513
-
(2008)
Plant J
, vol.55
, pp. 504-513
-
-
Benedito, V.A.1
Torres-Jerez, I.2
Murray, J.D.3
Andriankaja, A.4
Allen, S.5
Kakar, K.6
Wandrey, M.7
Verdier, J.8
Zuber, H.9
Ott, T.10
et al11
-
5
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc B 57: 289-300
-
(1995)
J R Stat Soc B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
6
-
-
43549121485
-
Transcription profiling of soybean nodulation by Bradyrhizobium japonicum
-
Brechenmacher L, Kim MY, Benitez M, Li M, Joshi T, Calla B, Lee MP, Libault M, Vodkin LO, Xu D, et al (2008) Transcription profiling of soybean nodulation by Bradyrhizobium japonicum. Mol Plant Microbe Interact 21: 631-645
-
(2008)
Mol Plant Microbe Interact
, vol.21
, pp. 631-645
-
-
Brechenmacher, L.1
Kim, M.Y.2
Benitez, M.3
Li, M.4
Joshi, T.5
Calla, B.6
Lee, M.P.7
Libault, M.8
Vodkin, L.O.9
Xu, D.10
et al11
-
7
-
-
4444220733
-
Plant cell wall remodelling in the Rhizobium-legume symbiosis
-
Brewin NJ (2004) Plant cell wall remodelling in the Rhizobium-legume symbiosis. Crit Rev Plant Sci 23: 293-316
-
(2004)
Crit Rev Plant Sci
, vol.23
, pp. 293-316
-
-
Brewin, N.J.1
-
8
-
-
0015189585
-
Control of leghaemoglobin synthesis in snake beans
-
Broughton WJ, Dilworth MJ (1971) Control of leghaemoglobin synthesis in snake beans. Biochem J 125: 1075-1080
-
(1971)
Biochem J
, vol.125
, pp. 1075-1080
-
-
Broughton, W.J.1
Dilworth, M.J.2
-
9
-
-
0033784010
-
Four genes of Medicago truncatula controlling components of a nod factor transduction pathway
-
Catoira R, Galera C, de Billy F, Penmetsa RV, Journet EP, Maillet F, Rosenberg C, Cook D, Gough C, Denarie J (2000) Four genes of Medicago truncatula controlling components of a nod factor transduction pathway. Plant Cell 12: 1647-1666
-
(2000)
Plant Cell
, vol.12
, pp. 1647-1666
-
-
Catoira, R.1
Galera, C.2
de Billy, F.3
Penmetsa, R.V.4
Journet, E.P.5
Maillet, F.6
Rosenberg, C.7
Cook, D.8
Gough, C.9
Denarie, J.10
-
10
-
-
0015663937
-
Transmissible resistance to penicillin G, neomycin, and chloramphenicol in Rhizobium japonicum
-
Cole MA, Elkan GH (1973) Transmissible resistance to penicillin G, neomycin, and chloramphenicol in Rhizobium japonicum. Antimicrob Agents Chemother 4: 248-253
-
(1973)
Antimicrob Agents Chemother
, vol.4
, pp. 248-253
-
-
Cole, M.A.1
Elkan, G.H.2
-
11
-
-
4143050209
-
Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus
-
Colebatch G, Desbrosses G, Ott T, Krusell L, Montanari O, Kloska S, Kopka J, Udvardi MK (2004) Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus. Plant J 39: 487-512
-
(2004)
Plant J
, vol.39
, pp. 487-512
-
-
Colebatch, G.1
Desbrosses, G.2
Ott, T.3
Krusell, L.4
Montanari, O.5
Kloska, S.6
Kopka, J.7
Udvardi, M.K.8
-
12
-
-
0035991143
-
Novel aspects of symbiotic nitrogen fixation uncovered by transcript profiling with cDNA arrays
-
Colebatch G, Kloska S, Trevaskis B, Freund S, Altmann T, Udvardi MK (2002) Novel aspects of symbiotic nitrogen fixation uncovered by transcript profiling with cDNA arrays. Mol Plant Microbe Interact 15: 411-420
-
(2002)
Mol Plant Microbe Interact
, vol.15
, pp. 411-420
-
-
Colebatch, G.1
Kloska, S.2
Trevaskis, B.3
Freund, S.4
Altmann, T.5
Udvardi, M.K.6
-
13
-
-
33751217135
-
MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula
-
Combier JP, Frugier F, de Billy F, Boualem A, El-Yahyaoui F, Moreau S, Vernie T, Ott T, Gamas P, Crespi M, et al (2006) MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula. Genes Dev 20: 3084-3088
-
(2006)
Genes Dev
, vol.20
, pp. 3084-3088
-
-
Combier, J.P.1
Frugier, F.2
de Billy, F.3
Boualem, A.4
El-Yahyaoui, F.5
Moreau, S.6
Vernie, T.7
Ott, T.8
Gamas, P.9
Crespi, M.10
et al11
-
14
-
-
16544376129
-
Expression profiling in Medicago truncatula identifies more than 750 genes differentially expressed during nodulation, including many potential regulators of the symbiotic program
-
El Yahyaoui F, Kuster H, Ben Amor B, Hohnjec N, Puhler A, Becker A, Gouzy J, Vernie T, Gough C, Niebel A, et al (2004) Expression profiling in Medicago truncatula identifies more than 750 genes differentially expressed during nodulation, including many potential regulators of the symbiotic program. Plant Physiol 136: 3159-3176
-
(2004)
Plant Physiol
, vol.136
, pp. 3159-3176
-
-
El Yahyaoui, F.1
Kuster, H.2
Ben Amor, B.3
Hohnjec, N.4
Puhler, A.5
Becker, A.6
Gouzy, J.7
Vernie, T.8
Gough, C.9
Niebel, A.10
et al11
-
15
-
-
26444452333
-
Nodulation phenotypes of gibberellin and brassinosteroid mutants of pea
-
Ferguson BJ, Ross JJ, Reid JB (2005) Nodulation phenotypes of gibberellin and brassinosteroid mutants of pea. Plant Physiol 138: 2396-2405
-
(2005)
Plant Physiol
, vol.138
, pp. 2396-2405
-
-
Ferguson, B.J.1
Ross, J.J.2
Reid, J.B.3
-
16
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, et al (2004) Bioconductor: open software development for computational biology and bioinformatics. Genome Biol 5: R80
-
(2004)
Genome Biol
, vol.5
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
et al11
-
17
-
-
33745621580
-
Nodulation independent of rhizobia induced by a calcium-activated kinase lacking autoinhibition
-
Gleason C, Chaudhuri S, Yang T, Munoz A, Poovaiah BW, Oldroyd GE (2006) Nodulation independent of rhizobia induced by a calcium-activated kinase lacking autoinhibition. Nature 441: 1149-1152
-
(2006)
Nature
, vol.441
, pp. 1149-1152
-
-
Gleason, C.1
Chaudhuri, S.2
Yang, T.3
Munoz, A.4
Poovaiah, B.W.5
Oldroyd, G.E.6
-
18
-
-
33845624616
-
Lotus japonicus nodulation requires two GRAS domain regulators, one of which is functionally conserved in a non-legume
-
Heckmann AB, Lombardo F, Miwa H, Perry JA, Bunnewell S, Parniske M, Wang TL, Downie JA (2006) Lotus japonicus nodulation requires two GRAS domain regulators, one of which is functionally conserved in a non-legume. Plant Physiol 142: 1739-1750
-
(2006)
Plant Physiol
, vol.142
, pp. 1739-1750
-
-
Heckmann, A.B.1
Lombardo, F.2
Miwa, H.3
Perry, J.A.4
Bunnewell, S.5
Parniske, M.6
Wang, T.L.7
Downie, J.A.8
-
19
-
-
64749101372
-
GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula
-
Hirsch S, Kim J, Munoz A, Heckmann AB, Downie JA, Oldroyd GE (2009) GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula. Plant Cell 21: 545-557
-
(2009)
Plant Cell
, vol.21
, pp. 545-557
-
-
Hirsch, S.1
Kim, J.2
Munoz, A.3
Heckmann, A.B.4
Downie, J.A.5
Oldroyd, G.E.6
-
20
-
-
68449101071
-
Dissection of symbiosis and organ development by integrated transcriptome analysis of Lotus japonicus mutant and wild-type plants
-
Høgslund N, Radutoiu S, Krusell L, Voroshilova V, Hannah MA, Goffard N, Sanchez DH, Lippold F, Ott T, Sato S, et al (2009) Dissection of symbiosis and organ development by integrated transcriptome analysis of Lotus japonicus mutant and wild-type plants. PLoS One 4: e6556
-
(2009)
Plos One
, vol.e6556
, pp. 4
-
-
Høgslund, N.1
Radutoiu, S.2
Krusell, L.3
Voroshilova, V.4
Hannah, M.A.5
Goffard, N.6
Sanchez, D.H.7
Lippold, F.8
Ott, T.9
Sato, S.10
et al11
-
21
-
-
13444301253
-
Plastid proteins crucial for symbiotic fungal and bacterial entry into plant roots
-
Imaizumi-Anraku H, Takeda N, Charpentier M, Perry J, Miwa H, Umehara Y, Kouchi H, Murakami Y, Mulder L, Vickers K, et al (2005) Plastid proteins crucial for symbiotic fungal and bacterial entry into plant roots. Nature 433: 527-531
-
(2005)
Nature
, vol.433
, pp. 527-531
-
-
Imaizumi-Anraku, H.1
Takeda, N.2
Charpentier, M.3
Perry, J.4
Miwa, H.5
Umehara, Y.6
Kouchi, H.7
Murakami, Y.8
Mulder, L.9
Vickers, K.10
et al11
-
22
-
-
20544474319
-
Nodulation signaling in legumes requires NSP2, a member of the GRAS family of transcriptional regulators
-
Kalo P, Gleason C, Edwards A, Marsh J, Mitra RM, Hirsch S, Jakab J, Sims S, Long SR, Rogers J, et al (2005) Nodulation signaling in legumes requires NSP2, a member of the GRAS family of transcriptional regulators. Science 308: 1786-1789
-
(2005)
Science
, vol.308
, pp. 1786-1789
-
-
Kalo, P.1
Gleason, C.2
Edwards, A.3
Marsh, J.4
Mitra, R.M.5
Hirsch, S.6
Jakab, J.7
Sims, S.8
Long, S.R.9
Rogers, J.10
et al11
-
23
-
-
27744504607
-
Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis
-
Kistner C, Winzer T, Pitzschke A, Mulder L, Sato S, Kaneko T, Tabata S, Sandal N, Stougaard J, Webb KJ, et al (2005) Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis. Plant Cell 17: 2217-2229
-
(2005)
Plant Cell
, vol.17
, pp. 2217-2229
-
-
Kistner, C.1
Winzer, T.2
Pitzschke, A.3
Mulder, L.4
Sato, S.5
Kaneko, T.6
Tabata, S.7
Sandal, N.8
Stougaard, J.9
Webb, K.J.10
et al11
-
24
-
-
19944398115
-
Large-scale analysis of gene expression profiles during early stages of root nodule formation in a model legume, Lotus japonicus
-
Kouchi H, Shimomura K, Hata S, Hirota A, Wu GJ, Kumagai H, Tajima S, Suganuma N, Suzuki A, Aoki T, et al (2004) Large-scale analysis of gene expression profiles during early stages of root nodule formation in a model legume, Lotus japonicus. DNA Res 11: 263-274
-
(2004)
Dna Res
, vol.11
, pp. 263-274
-
-
Kouchi, H.1
Shimomura, K.2
Hata, S.3
Hirota, A.4
Wu, G.J.5
Kumagai, H.6
Tajima, S.7
Suganuma, N.8
Suzuki, A.9
Aoki, T.10
et al11
-
25
-
-
6344278694
-
Analysis of the root nodule-enhanced transcriptome in soybean
-
Lee H, Hur CG, Oh CJ, Kim HB, Pakr SY, An CS (2004) Analysis of the root nodule-enhanced transcriptome in soybean. Mol Cells 18: 53-62
-
(2004)
Mol Cells
, vol.18
, pp. 53-62
-
-
Lee, H.1
Hur, C.G.2
Oh, C.J.3
Kim, H.B.4
Pakr, S.Y.5
An, C.S.6
-
26
-
-
70350680821
-
Large-scale analysis of putative soybean regulatory gene expression identifies a Myb gene involved in soybean nodule development
-
Libault M, Joshi T, Takahashi K, Hurley-Sommer A, Puricelli K, Blake S, Xu D, Nguyen H, Stacey G (2009) Large-scale analysis of putative soybean regulatory gene expression identifies a Myb gene involved in soybean nodule development. Plant Physiol 151: 1207-1220
-
(2009)
Plant Physiol
, vol.151
, pp. 1207-1220
-
-
Libault, M.1
Joshi, T.2
Takahashi, K.3
Hurley-Sommer, A.4
Puricelli, K.5
Blake, S.6
Xu, D.7
Nguyen, H.8
Stacey, G.9
-
27
-
-
85167520149
-
Identification of four soybean reference genes for gene expression normalization
-
Libault M, Thibivilliers S, Bilgin DD, Radwan O, Benitez M, Clough SJ, Stacey G (2008) Identification of four soybean reference genes for gene expression normalization. Plant Genome 1: 44-54
-
(2008)
Plant Genome
, vol.1
, pp. 44-54
-
-
Libault, M.1
Thibivilliers, S.2
Bilgin, D.D.3
Radwan, O.4
Benitez, M.5
Clough, S.J.6
Stacey, G.7
-
28
-
-
33644841421
-
Gibberellins are involved in nodulation of Sesbania rostrata
-
Lievens S, Goormachtig S, Den Herder J, Capoen W, Mathis R, Hedden P, Holsters M (2005) Gibberellins are involved in nodulation of Sesbania rostrata. Plant Physiol 139: 1366-1379
-
(2005)
Plant Physiol
, vol.139
, pp. 1366-1379
-
-
Lievens, S.1
Goormachtig, S.2
Den Herder, J.3
Capoen, W.4
Mathis, R.5
Hedden, P.6
Holsters, M.7
-
29
-
-
33745472685
-
Transcript analysis of early nodulation events in Medicago truncatula
-
Lohar DP, Sharopova N, Endre G, Penuela S, Samac D, Town C, Silverstein KA, VandenBosch KA (2006) Transcript analysis of early nodulation events in Medicago truncatula. Plant Physiol 140: 221-234
-
(2006)
Plant Physiol
, vol.140
, pp. 221-234
-
-
Lohar, D.P.1
Sharopova, N.2
Endre, G.3
Penuela, S.4
Samac, D.5
Town, C.6
Silverstein, K.A.7
Vandenbosch, K.A.8
-
30
-
-
0142104972
-
A receptor kinase gene of the LysM type is involved in legume perception of rhizobial signals
-
Madsen EB, Madsen LH, Radutoiu S, Olbryt M, Rakwalska M, Szczyglowski K, Sato S, Kaneko T, Tabata S, Sandal N, et al (2003) A receptor kinase gene of the LysM type is involved in legume perception of rhizobial signals. Nature 425: 637-640
-
(2003)
Nature
, vol.425
, pp. 637-640
-
-
Madsen, E.B.1
Madsen, L.H.2
Radutoiu, S.3
Olbryt, M.4
Rakwalska, M.5
Szczyglowski, K.6
Sato, S.7
Kaneko, T.8
Tabata, S.9
Sandal, N.10
et al11
-
31
-
-
64249084994
-
Gibberellin controls the nodulation signaling pathway in Lotus japonicus
-
Maekawa T, Maekawa-Yoshikawa M, Takeda N, Imaizumi-Anraku H, Murooka Y, Hayashi M (2009) Gibberellin controls the nodulation signaling pathway in Lotus japonicus. Plant J 58: 183-194
-
(2009)
Plant J
, vol.58
, pp. 183-194
-
-
Maekawa, T.1
Maekawa-Yoshikawa, M.2
Takeda, N.3
Imaizumi-Anraku, H.4
Murooka, Y.5
Hayashi, M.6
-
32
-
-
34250613840
-
Medicago truncatula NIN is essential for rhizobial-independent nodule organogenesis induced by autoactive calcium/calmodulin-dependent protein kinase
-
Marsh JF, Rakocevic A, Mitra RM, Brocard L, Sun J, Eschstruth A, Long SR, Schultze M, Ratet P, Oldroyd GE (2007) Medicago truncatula NIN is essential for rhizobial-independent nodule organogenesis induced by autoactive calcium/calmodulin-dependent protein kinase. Plant Physiol 144: 324-335
-
(2007)
Plant Physiol
, vol.144
, pp. 324-335
-
-
Marsh, J.F.1
Rakocevic, A.2
Mitra, R.M.3
Brocard, L.4
Sun, J.5
Eschstruth, A.6
Long, S.R.7
Schultze, M.8
Ratet, P.9
Oldroyd, G.E.10
-
33
-
-
65349155347
-
Management of high-throughout DNA sequencing projects: Alpheus
-
Miller NA, Kingsmore SF, Farmer AD, Langley RJ, Mudge J, Crow JA, Gonzalez AJ, Schilkey FD, Kim RJ, van Velkinburgh J, et al (2008) Management of high-throughout DNA sequencing projects: Alpheus. J Comp Sci Syst Biol 1: 132-148
-
(2008)
J Comp Sci Syst Biol
, vol.1
, pp. 132-148
-
-
Miller, N.A.1
Kingsmore, S.F.2
Farmer, A.D.3
Langley, R.J.4
Mudge, J.5
Crow, J.A.6
Gonzalez, A.J.7
Schilkey, F.D.8
Kim, R.J.9
van Velkinburgh, J.10
et al11
-
34
-
-
0030187484
-
Expression of the early nodulin, ENOD40, in soybean roots in response to various lipochitin signal molecules
-
Minami E, Kouchi H, Cohn JR, Ogawa T, Stacey G (1996) Expression of the early nodulin, ENOD40, in soybean roots in response to various lipochitin signal molecules. Plant J 10: 23-32
-
(1996)
Plant J
, vol.10
, pp. 23-32
-
-
Minami, E.1
Kouchi, H.2
Cohn, J.R.3
Ogawa, T.4
Stacey, G.5
-
35
-
-
33847768971
-
Positional cloning identifies Lotus japonicus NSP2, a putative transcription factor of the GRAS family, required for NIN and ENOD40 gene expression in nodule initiation
-
Murakami Y, Miwa H, Imaizumi-Anraku H, Kouchi H, Downie JA, Kawaguchi M, Kawasaki S (2006) Positional cloning identifies Lotus japonicus NSP2, a putative transcription factor of the GRAS family, required for NIN and ENOD40 gene expression in nodule initiation. DNA Res 13: 255-265
-
(2006)
Dna Res
, vol.13
, pp. 255-265
-
-
Murakami, Y.1
Miwa, H.2
Imaizumi-Anraku, H.3
Kouchi, H.4
Downie, J.A.5
Kawaguchi, M.6
Kawasaki, S.7
-
36
-
-
0036669991
-
The novel symbiotic phenotype of enhanced-nodulating mutant of Lotus japonicus: Astray mutant is an early nodulating mutant with wider nodulation zone
-
Nishimura R, Ohmori M, Kawaguchi M (2002) The novel symbiotic phenotype of enhanced-nodulating mutant of Lotus japonicus: astray mutant is an early nodulating mutant with wider nodulation zone. Plant Cell Physiol 43: 853-859
-
(2002)
Plant Cell Physiol
, vol.43
, pp. 853-859
-
-
Nishimura, R.1
Ohmori, M.2
Kawaguchi, M.3
-
37
-
-
44649141367
-
Coordinating nodule morphogenesis with rhizobial infection in legumes
-
Oldroyd GE, Downie JA (2008) Coordinating nodule morphogenesis with rhizobial infection in legumes. Annu Rev Plant Biol 59: 519-546
-
(2008)
Annu Rev Plant Biol
, vol.59
, pp. 519-546
-
-
Oldroyd, G.E.1
Downie, J.A.2
-
38
-
-
0037355454
-
Identification and characterization of Nodulation-Signaling Pathway 2, a gene of Medicago truncatula involved in Nod factor signaling
-
Oldroyd GE, Long SR (2003) Identification and characterization of Nodulation-Signaling Pathway 2, a gene of Medicago truncatula involved in Nod factor signaling. Plant Physiol 131: 1027-1032
-
(2003)
Plant Physiol
, vol.131
, pp. 1027-1032
-
-
Oldroyd, G.E.1
Long, S.R.2
-
39
-
-
70149113077
-
-
R Development Core Team, R Foundation for Statistical Computing, Vienna
-
R Development Core Team (2009) R: a Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna. http://www.R-project.org
-
(2009)
R: A Language and Environment For Statistical Computing
-
-
-
40
-
-
0142041483
-
Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases
-
Radutoiu S, Madsen LH, Madsen EB, Felle HH, Umehara Y, Gronlund M, Sato S, Nakamura Y, Tabata S, Sandal N, et al (2003) Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases. Nature 425: 585-592
-
(2003)
Nature
, vol.425
, pp. 585-592
-
-
Radutoiu, S.1
Madsen, L.H.2
Madsen, E.B.3
Felle, H.H.4
Umehara, Y.5
Gronlund, M.6
Sato, S.7
Nakamura, Y.8
Tabata, S.9
Sandal, N.10
et al11
-
41
-
-
0037435395
-
Assumption- free analysis of quantitative real-time polymerase chain reaction (PCR) data
-
Ramakers C, Ruijter JM, Deprez RH, Moorman AF (2003) Assumption- free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci Lett 339: 62-66
-
(2003)
Neurosci Lett
, vol.339
, pp. 62-66
-
-
Ramakers, C.1
Ruijter, J.M.2
Deprez, R.H.3
Moorman, A.F.4
-
42
-
-
0033547409
-
A plant regulator controlling development of symbiotic root nodules
-
Schauser L, Roussis A, Stiller J, Stougaard J (1999) A plant regulator controlling development of symbiotic root nodules. Nature 402: 191-195
-
(1999)
Nature
, vol.402
, pp. 191-195
-
-
Schauser, L.1
Roussis, A.2
Stiller, J.3
Stougaard, J.4
-
43
-
-
16444378057
-
Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus japonicus
-
Schauser L, Wieloch W, Stougaard J (2005) Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus japonicus. J Mol Evol 60: 229-237
-
(2005)
J Mol Evol
, vol.60
, pp. 229-237
-
-
Schauser, L.1
Wieloch, W.2
Stougaard, J.3
-
44
-
-
2442712340
-
Mining EST databases to resolve evolutionary events in major crop species
-
Schlueter JA, Dixon P, Granger C, Grant D, Clark L, Doyle JJ, Shoemaker RC (2004) Mining EST databases to resolve evolutionary events in major crop species. Genome 47: 868-876
-
(2004)
Genome
, vol.47
, pp. 868-876
-
-
Schlueter, J.A.1
Dixon, P.2
Granger, C.3
Grant, D.4
Clark, L.5
Doyle, J.J.6
Shoemaker, R.C.7
-
45
-
-
36248969310
-
Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing
-
Schlueter JA, Lin JY, Schlueter SD, Vasylenko-Sanders IF, Deshpande S, Yi J, O'Bleness M, Roe BA, Nelson RT, Scheffler BE, et al (2007) Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing. BMC Genomics 8: 330
-
(2007)
Bmc Genomics
, vol.8
, pp. 330
-
-
Schlueter, J.A.1
Lin, J.Y.2
Schlueter, S.D.3
Vasylenko-Sanders, I.F.4
Deshpande, S.5
Yi, J.6
O'Bleness, M.7
Roe, B.A.8
Nelson, R.T.9
Scheffler, B.E.10
et al11
-
46
-
-
74549221016
-
Genome sequence of the palaeopolyploid soybean
-
Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, Hyten DL, Song Q, Thelen JJ, Cheng J, et al (2010) Genome sequence of the palaeopolyploid soybean. Nature 463: 178-183
-
(2010)
Nature
, vol.463
, pp. 178-183
-
-
Schmutz, J.1
Cannon, S.B.2
Schlueter, J.3
Ma, J.4
Mitros, T.5
Nelson, W.6
Hyten, D.L.7
Song, Q.8
Thelen, J.J.9
Cheng, J.10
et al11
-
47
-
-
20544441300
-
NSP1 of the GRAS protein family is essential for rhizobial Nod factor-induced transcription
-
Smit P, Raedts J, Portyanko V, Debelle F, Gough C, Bisseling T, Geurts R (2005) NSP1 of the GRAS protein family is essential for rhizobial Nod factor-induced transcription. Science 308: 1789-1791
-
(2005)
Science
, vol.308
, pp. 1789-1791
-
-
Smit, P.1
Raedts, J.2
Portyanko, V.3
Debelle, F.4
Gough, C.5
Bisseling, T.6
Geurts, R.7
-
48
-
-
4544341015
-
Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
-
Smyth GK (2004) Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 3: Article 3
-
(2004)
Stat Appl Genet Mol Biol 3: Article 3
-
-
Smyth, G.K.1
-
49
-
-
33644872577
-
Limma: Linear models for microarray data
-
In R Gentleman, V Carey, S Dudoit, R Irizarry, W Huber, eds, Springer, New York
-
Smyth GK (2005) Limma: linear models for microarray data. In R Gentleman, V Carey, S Dudoit, R Irizarry, W Huber, eds, Bioinformatics and Computational Biology Solutions using R and Bioconductor. Springer, New York, pp 397-420
-
(2005)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
, pp. 397-420
-
-
Smyth, G.K.1
-
50
-
-
33646846862
-
Nitrogen fixation mutants of Medicago truncatula fail to support plant and bacterial symbiotic gene expression
-
Starker CG, Parra-Colmenares AL, Smith L, Mitra RM, Long SR (2006) Nitrogen fixation mutants of Medicago truncatula fail to support plant and bacterial symbiotic gene expression. Plant Physiol 140: 671-680
-
(2006)
Plant Physiol
, vol.140
, pp. 671-680
-
-
Starker, C.G.1
Parra-Colmenares, A.L.2
Smith, L.3
Mitra, R.M.4
Long, S.R.5
-
51
-
-
33646684841
-
2+/calmodulin-dependent kinase leads to spontaneous nodule development
-
2+/calmodulin-dependent kinase leads to spontaneous nodule development. Nature 441: 1153-1156
-
(2006)
Nature
, vol.441
, pp. 1153-1156
-
-
Tirichine, L.1
Imaizumi-Anraku, H.2
Yoshida, S.3
Murakami, Y.4
Madsen, L.H.5
Miwa, H.6
Nakagawa, T.7
Sandal, N.8
Albrektsen, A.S.9
Kawaguchi, M.10
et al11
-
52
-
-
17644411695
-
Proteomic analysis of soybean root hairs after infection by Bradyrhizobium japonicum
-
Wan J, Torres M, Ganapathy A, Thelen J, DaGue BB, Mooney B, Xu D, Stacey G (2005) Proteomic analysis of soybean root hairs after infection by Bradyrhizobium japonicum. Mol Plant Microbe Interact 18: 458-467
-
(2005)
Mol Plant Microbe Interact
, vol.18
, pp. 458-467
-
-
Wan, J.1
Torres, M.2
Ganapathy, A.3
Thelen, J.4
Dague, B.B.5
Mooney, B.6
Xu, D.7
Stacey, G.8
-
53
-
-
18744383071
-
GMAP: A genomic mapping and alignment program for mRNA and EST sequences
-
Wu TD, Watanabe CK (2005) GMAP: a genomic mapping and alignment program for mRNA and EST sequences. Bioinformatics 21: 1859-1875
-
(2005)
Bioinformatics
, vol.21
, pp. 1859-1875
-
-
Wu, T.D.1
Watanabe, C.K.2
-
54
-
-
10844290766
-
A model based background adjustment for oligonucleotide expression arrays
-
Wu Z, Irizarry R, Gentleman R, Martinez Murillo F, Spencer F (2004) A model based background adjustment for oligonucleotide expression arrays. J Am Stat Assoc 99: 909-917
-
(2004)
J Am Stat Assoc
, vol.99
, pp. 909-917
-
-
Wu, Z.1
Irizarry, R.2
Gentleman, R.3
Martinez Murillo, F.4
Spencer, F.5
-
55
-
-
23844551199
-
Stochastic models inspired by hybridization theory for short oligonucleotide arrays
-
Wu Z, Irizarry RA (2005) Stochastic models inspired by hybridization theory for short oligonucleotide arrays. J Comput Biol 12: 882-893
-
(2005)
J Comput Biol
, vol.12
, pp. 882-893
-
-
Wu, Z.1
Irizarry, R.A.2
|