-
1
-
-
0025232737
-
Replicative capacity of HIV-2, like HIV-1, correlates with severity of immunodeficiency
-
Albert J., Naucler A., Bottiger B., Broliden P.A., Albino P., Ouattara S.A., Bjorkegren C., Valentin A., Biberfeld G., and Fenyo E.M. Replicative capacity of HIV-2, like HIV-1, correlates with severity of immunodeficiency. AIDS 4 4 (1990) 291-295
-
(1990)
AIDS
, vol.4
, Issue.4
, pp. 291-295
-
-
Albert, J.1
Naucler, A.2
Bottiger, B.3
Broliden, P.A.4
Albino, P.5
Ouattara, S.A.6
Bjorkegren, C.7
Valentin, A.8
Biberfeld, G.9
Fenyo, E.M.10
-
2
-
-
34147180438
-
HIV-1 subtype A envelope variants from early in infection have variable sensitivity to neutralization and to inhibitors of viral entry
-
Blish C.A., Nedellec R., Mandaliya K., Mosier D.E., and Overbaugh J. HIV-1 subtype A envelope variants from early in infection have variable sensitivity to neutralization and to inhibitors of viral entry. AIDS 21 6 (2007) 693-702
-
(2007)
AIDS
, vol.21
, Issue.6
, pp. 693-702
-
-
Blish, C.A.1
Nedellec, R.2
Mandaliya, K.3
Mosier, D.E.4
Overbaugh, J.5
-
3
-
-
67650930740
-
Cross-subtype neutralization sensitivity despite monoclonal antibody resistance among early subtype A, C, and D HIV-1 envelope variants
-
Blish C.A., Jalalian-Lechak Z., Rainwater S., Nguyen M.A., Dogan O.C., and Overbaugh J. Cross-subtype neutralization sensitivity despite monoclonal antibody resistance among early subtype A, C, and D HIV-1 envelope variants. J. Virol. 83 15 (2009) 7783-7788
-
(2009)
J. Virol.
, vol.83
, Issue.15
, pp. 7783-7788
-
-
Blish, C.A.1
Jalalian-Lechak, Z.2
Rainwater, S.3
Nguyen, M.A.4
Dogan, O.C.5
Overbaugh, J.6
-
5
-
-
0030842609
-
Specific N-linked and O-linked glycosylation additions in the envelope V1 domain of SIV variants that evolve in the host alter neutralizing antibody recognition
-
Chackerian B., Rudensey L., and Overbaugh J. Specific N-linked and O-linked glycosylation additions in the envelope V1 domain of SIV variants that evolve in the host alter neutralizing antibody recognition. J. Virol. 71 10 (1997) 7719-7727
-
(1997)
J. Virol.
, vol.71
, Issue.10
, pp. 7719-7727
-
-
Chackerian, B.1
Rudensey, L.2
Overbaugh, J.3
-
6
-
-
0030913366
-
Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection
-
Chun T.W., Carruth L., Finzi D., Shen X., DiGiuseppe J.A., Taylor H., Hermankova M., Chadwick K., Margolick J., Quinn T.C., Kuo Y.H., Brookmeyer R., Zeiger M.A., Barditch-Crovo P., and Siliciano R.F. Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection. Nature 387 6629 (1997) 183-188
-
(1997)
Nature
, vol.387
, Issue.6629
, pp. 183-188
-
-
Chun, T.W.1
Carruth, L.2
Finzi, D.3
Shen, X.4
DiGiuseppe, J.A.5
Taylor, H.6
Hermankova, M.7
Chadwick, K.8
Margolick, J.9
Quinn, T.C.10
Kuo, Y.H.11
Brookmeyer, R.12
Zeiger, M.A.13
Barditch-Crovo, P.14
Siliciano, R.F.15
-
7
-
-
33744904454
-
Neutralizing antibody responses against autologous and heterologous viruses in acute versus chronic human immunodeficiency virus (HIV) infection: evidence for a constraint on the ability of HIV to completely evade neutralizing antibody responses
-
Deeks S.G., Schweighardt B., Wrin T., Galovich J., Hoh R., Sinclair E., Hunt P., McCune J.M., Martin J.N., Petropoulos C.J., and Hecht F.M. Neutralizing antibody responses against autologous and heterologous viruses in acute versus chronic human immunodeficiency virus (HIV) infection: evidence for a constraint on the ability of HIV to completely evade neutralizing antibody responses. J. Virol. 80 12 (2006) 6155-6164
-
(2006)
J. Virol.
, vol.80
, Issue.12
, pp. 6155-6164
-
-
Deeks, S.G.1
Schweighardt, B.2
Wrin, T.3
Galovich, J.4
Hoh, R.5
Sinclair, E.6
Hunt, P.7
McCune, J.M.8
Martin, J.N.9
Petropoulos, C.J.10
Hecht, F.M.11
-
8
-
-
34249950588
-
Dissecting the neutralizing antibody specificities of broadly neutralizing sera from human immunodeficiency virus type 1-infected donors
-
Dhillon A.K., Donners H., Pantophlet R., Johnson W.E., Decker J.M., Shaw G.M., Lee F.H., Richman D.D., Doms R.W., Vanham G., and Burton D.R. Dissecting the neutralizing antibody specificities of broadly neutralizing sera from human immunodeficiency virus type 1-infected donors. J. Virol. 81 12 (2007) 6548-6562
-
(2007)
J. Virol.
, vol.81
, Issue.12
, pp. 6548-6562
-
-
Dhillon, A.K.1
Donners, H.2
Pantophlet, R.3
Johnson, W.E.4
Decker, J.M.5
Shaw, G.M.6
Lee, F.H.7
Richman, D.D.8
Doms, R.W.9
Vanham, G.10
Burton, D.R.11
-
9
-
-
33745234845
-
Role of maternal autologous neutralizing antibody in selective perinatal transmission of human immunodeficiency virus type 1 escape variants
-
Dickover R., Garratty E., Yusim K., Miller C., Korber B., and Bryson Y. Role of maternal autologous neutralizing antibody in selective perinatal transmission of human immunodeficiency virus type 1 escape variants. J. Virol. 80 13 (2006) 6525-6533
-
(2006)
J. Virol.
, vol.80
, Issue.13
, pp. 6525-6533
-
-
Dickover, R.1
Garratty, E.2
Yusim, K.3
Miller, C.4
Korber, B.5
Bryson, Y.6
-
10
-
-
23844468382
-
Human immunodeficiency virus type 1 subtype B ancestral envelope protein is functional and elicits neutralizing antibodies in rabbits similar to those elicited by a circulating subtype B envelope
-
Doria-Rose N.A., Learn G.H., Rodrigo A.G., Nickle D.C., Li F., Mahalanabis M., Hensel M.T., McLaughlin S., Edmonson P.F., Montefiori D., Barnett S.W., Haigwood N.L., and Mullins J.I. Human immunodeficiency virus type 1 subtype B ancestral envelope protein is functional and elicits neutralizing antibodies in rabbits similar to those elicited by a circulating subtype B envelope. J. Virol. 79 17 (2005) 11214-11224
-
(2005)
J. Virol.
, vol.79
, Issue.17
, pp. 11214-11224
-
-
Doria-Rose, N.A.1
Learn, G.H.2
Rodrigo, A.G.3
Nickle, D.C.4
Li, F.5
Mahalanabis, M.6
Hensel, M.T.7
McLaughlin, S.8
Edmonson, P.F.9
Montefiori, D.10
Barnett, S.W.11
Haigwood, N.L.12
Mullins, J.I.13
-
11
-
-
0035035296
-
Relationships between CD4 independence, neutralization sensitivity, and exposure of a CD4-induced epitope in a human immunodeficiency virus type 1 envelope protein
-
Edwards T.G., Hoffman T.L., Baribaud F., Wyss S., LaBranche C.C., Romano J., Adkinson J., Sharron M., Hoxie J.A., and Doms R.W. Relationships between CD4 independence, neutralization sensitivity, and exposure of a CD4-induced epitope in a human immunodeficiency virus type 1 envelope protein. J. Virol. 75 11 (2001) 5230-5239
-
(2001)
J. Virol.
, vol.75
, Issue.11
, pp. 5230-5239
-
-
Edwards, T.G.1
Hoffman, T.L.2
Baribaud, F.3
Wyss, S.4
LaBranche, C.C.5
Romano, J.6
Adkinson, J.7
Sharron, M.8
Hoxie, J.A.9
Doms, R.W.10
-
12
-
-
34249940652
-
Neutralizing antibody responses in acute human immunodeficiency virus type 1 subtype C infection
-
Gray E.S., Moore P.L., Choge I.A., Decker J.M., Bibollet-Ruche F., Li H., Leseka N., Treurnicht F., Mlisana K., Shaw G.M., Karim S.S., Williamson C., and Morris L. Neutralizing antibody responses in acute human immunodeficiency virus type 1 subtype C infection. J. Virol. 81 12 (2007) 6187-6196
-
(2007)
J. Virol.
, vol.81
, Issue.12
, pp. 6187-6196
-
-
Gray, E.S.1
Moore, P.L.2
Choge, I.A.3
Decker, J.M.4
Bibollet-Ruche, F.5
Li, H.6
Leseka, N.7
Treurnicht, F.8
Mlisana, K.9
Shaw, G.M.10
Karim, S.S.11
Williamson, C.12
Morris, L.13
-
13
-
-
0027205624
-
Relation of phenotype evolution of HIV-1 to envelope V2 configuration
-
Groenink M., Fouchier R.A., Broersen S., Baker C.H., Koot M., van't Wout A.B., Huisman H.G., Miedema F., Tersmette M., and Schuitemaker H. Relation of phenotype evolution of HIV-1 to envelope V2 configuration. Science 260 5113 (1993) 1513-1516
-
(1993)
Science
, vol.260
, Issue.5113
, pp. 1513-1516
-
-
Groenink, M.1
Fouchier, R.A.2
Broersen, S.3
Baker, C.H.4
Koot, M.5
van't Wout, A.B.6
Huisman, H.G.7
Miedema, F.8
Tersmette, M.9
Schuitemaker, H.10
-
14
-
-
0032922339
-
Emerging cytopathic and antigenic simian immunodeficiency virus variants influence AIDS progression
-
Kimata J.T., Kuller L., Anderson D.B., Dailey P., and Overbaugh J. Emerging cytopathic and antigenic simian immunodeficiency virus variants influence AIDS progression. Nat. Med. 5 5 (1999) 535-541
-
(1999)
Nat. Med.
, vol.5
, Issue.5
, pp. 535-541
-
-
Kimata, J.T.1
Kuller, L.2
Anderson, D.B.3
Dailey, P.4
Overbaugh, J.5
-
15
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16 2 (1980) 111-120
-
(1980)
J. Mol. Evol.
, vol.16
, Issue.2
, pp. 111-120
-
-
Kimura, M.1
-
16
-
-
0035100868
-
Loss of a single N-linked glycan allows CD4-independent human immunodeficiency virus type 1 infection by altering the position of the gp120 V1/V2 variable loops
-
Kolchinsky P., Kiprilov E., Bartley P., Rubinstein R., and Sodroski J. Loss of a single N-linked glycan allows CD4-independent human immunodeficiency virus type 1 infection by altering the position of the gp120 V1/V2 variable loops. J. Virol. 75 7 (2001) 3435-3443
-
(2001)
J. Virol.
, vol.75
, Issue.7
, pp. 3435-3443
-
-
Kolchinsky, P.1
Kiprilov, E.2
Bartley, P.3
Rubinstein, R.4
Sodroski, J.5
-
17
-
-
0035131175
-
Increased neutralization sensitivity of CD4-independent human immunodeficiency virus variants
-
Kolchinsky P., Kiprilov E., and Sodroski J. Increased neutralization sensitivity of CD4-independent human immunodeficiency virus variants. J. Virol. 75 5 (2001) 2041-2050
-
(2001)
J. Virol.
, vol.75
, Issue.5
, pp. 2041-2050
-
-
Kolchinsky, P.1
Kiprilov, E.2
Sodroski, J.3
-
18
-
-
9144259112
-
Injectable contraceptive use and genital ulcer disease during the early phase of HIV-1 infection increase plasma virus load in women
-
Lavreys L., Baeten J.M., Kreiss J.K., Richardson B.A., Chohan B.H., Hassan W., Panteleeff D.D., Mandaliya K., Ndinya-Achola J.O., and Overbaugh J. Injectable contraceptive use and genital ulcer disease during the early phase of HIV-1 infection increase plasma virus load in women. J. Infect. Dis. 189 2 (2004) 303-311
-
(2004)
J. Infect. Dis.
, vol.189
, Issue.2
, pp. 303-311
-
-
Lavreys, L.1
Baeten, J.M.2
Kreiss, J.K.3
Richardson, B.A.4
Chohan, B.H.5
Hassan, W.6
Panteleeff, D.D.7
Mandaliya, K.8
Ndinya-Achola, J.O.9
Overbaugh, J.10
-
19
-
-
23244434512
-
Human immunodeficiency virus type 1 env clones from acute and early subtype B infections for standardized assessments of vaccine-elicited neutralizing antibodies
-
Li M., Gao F., Mascola J.R., Stamatatos L., Polonis V.R., Koutsoukos M., Voss G., Goepfert P., Gilbert P., Greene K.M., Bilska M., Kothe D.L., Salazar-Gonzalez J.F., Wei X., Decker J.M., Hahn B.H., and Montefiori D.C. Human immunodeficiency virus type 1 env clones from acute and early subtype B infections for standardized assessments of vaccine-elicited neutralizing antibodies. J. Virol. 79 16 (2005) 10108-10125
-
(2005)
J. Virol.
, vol.79
, Issue.16
, pp. 10108-10125
-
-
Li, M.1
Gao, F.2
Mascola, J.R.3
Stamatatos, L.4
Polonis, V.R.5
Koutsoukos, M.6
Voss, G.7
Goepfert, P.8
Gilbert, P.9
Greene, K.M.10
Bilska, M.11
Kothe, D.L.12
Salazar-Gonzalez, J.F.13
Wei, X.14
Decker, J.M.15
Hahn, B.H.16
Montefiori, D.C.17
-
20
-
-
33646751914
-
Evidence for potent autologous neutralizing antibody titers and compact envelopes in early infection with subtype C human immunodeficiency virus type 1
-
Li B., Decker J.M., Johnson R.W., Bibollet-Ruche F., Wei X., Mulenga J., Allen S., Hunter E., Hahn B.H., Shaw G.M., Blackwell J.L., and Derdeyn C.A. Evidence for potent autologous neutralizing antibody titers and compact envelopes in early infection with subtype C human immunodeficiency virus type 1. J. Virol. 80 11 (2006) 5211-5218
-
(2006)
J. Virol.
, vol.80
, Issue.11
, pp. 5211-5218
-
-
Li, B.1
Decker, J.M.2
Johnson, R.W.3
Bibollet-Ruche, F.4
Wei, X.5
Mulenga, J.6
Allen, S.7
Hunter, E.8
Hahn, B.H.9
Shaw, G.M.10
Blackwell, J.L.11
Derdeyn, C.A.12
-
21
-
-
33751224478
-
Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa
-
Li M., Salazar-Gonzalez J.F., Derdeyn C.A., Morris L., Williamson C., Robinson J.E., Decker J.M., Li Y., Salazar M.G., Polonis V.R., Mlisana K., Karim S.A., Hong K., Greene K.M., Bilska M., Zhou J., Allen S., Chomba E., Mulenga J., Vwalika C., Gao F., Zhang M., Korber B.T., Hunter E., Hahn B.H., and Montefiori D.C. Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa. J. Virol. 80 23 (2006) 11776-11790
-
(2006)
J. Virol.
, vol.80
, Issue.23
, pp. 11776-11790
-
-
Li, M.1
Salazar-Gonzalez, J.F.2
Derdeyn, C.A.3
Morris, L.4
Williamson, C.5
Robinson, J.E.6
Decker, J.M.7
Li, Y.8
Salazar, M.G.9
Polonis, V.R.10
Mlisana, K.11
Karim, S.A.12
Hong, K.13
Greene, K.M.14
Bilska, M.15
Zhou, J.16
Allen, S.17
Chomba, E.18
Mulenga, J.19
Vwalika, C.20
Gao, F.21
Zhang, M.22
Korber, B.T.23
Hunter, E.24
Hahn, B.H.25
Montefiori, D.C.26
more..
-
22
-
-
34948854718
-
Broad HIV-1 neutralization mediated by CD4-binding site antibodies
-
Li Y., Migueles S.A., Welcher B., Svehla K., Phogat A., Louder M.K., Wu X., Shaw G.M., Connors M., Wyatt R.T., and Mascola J.R. Broad HIV-1 neutralization mediated by CD4-binding site antibodies. Nat. Med. 13 9 (2007) 1032-1034
-
(2007)
Nat. Med.
, vol.13
, Issue.9
, pp. 1032-1034
-
-
Li, Y.1
Migueles, S.A.2
Welcher, B.3
Svehla, K.4
Phogat, A.5
Louder, M.K.6
Wu, X.7
Shaw, G.M.8
Connors, M.9
Wyatt, R.T.10
Mascola, J.R.11
-
23
-
-
37849026069
-
Removal of a single N-linked glycan in human immunodeficiency virus type 1 gp120 results in an enhanced ability to induce neutralizing antibody responses
-
Li Y., Cleveland B., Klots I., Travis B., Richardson B.A., Anderson D., Montefiori D., Polacino P., and Hu S.L. Removal of a single N-linked glycan in human immunodeficiency virus type 1 gp120 results in an enhanced ability to induce neutralizing antibody responses. J. Virol. 82 2 (2008) 638-651
-
(2008)
J. Virol.
, vol.82
, Issue.2
, pp. 638-651
-
-
Li, Y.1
Cleveland, B.2
Klots, I.3
Travis, B.4
Richardson, B.A.5
Anderson, D.6
Montefiori, D.7
Polacino, P.8
Hu, S.L.9
-
24
-
-
0036260635
-
HIV type 1 variants transmitted to women in Kenya require the CCR5 coreceptor for entry, regardless of the genetic complexity of the infecting virus
-
Long E.M., Rainwater S.M., Lavreys L., Mandaliya K., and Overbaugh J. HIV type 1 variants transmitted to women in Kenya require the CCR5 coreceptor for entry, regardless of the genetic complexity of the infecting virus. AIDS Res. Hum. Retrovir. 18 8 (2002) 567-576
-
(2002)
AIDS Res. Hum. Retrovir.
, vol.18
, Issue.8
, pp. 567-576
-
-
Long, E.M.1
Rainwater, S.M.2
Lavreys, L.3
Mandaliya, K.4
Overbaugh, J.5
-
25
-
-
58149487646
-
Continuous viral escape and selection by autologous neutralizing antibodies in drug-naive human immunodeficiency virus controllers
-
Mahalanabis M., Jayaraman P., Miura T., Pereyra F., Chester E.M., Richardson B., Walker B., and Haigwood N.L. Continuous viral escape and selection by autologous neutralizing antibodies in drug-naive human immunodeficiency virus controllers. J. Virol. 83 2 (2009) 662-672
-
(2009)
J. Virol.
, vol.83
, Issue.2
, pp. 662-672
-
-
Mahalanabis, M.1
Jayaraman, P.2
Miura, T.3
Pereyra, F.4
Chester, E.M.5
Richardson, B.6
Walker, B.7
Haigwood, N.L.8
-
26
-
-
0037385686
-
A novel antiviral intervention results in more accurate assessment of human immunodeficiency virus type 1 replication dynamics and T-cell decay in vivo
-
Markowitz M., Louie M., Hurley A., Sun E., Di Mascio M., Perelson A.S., and Ho D.D. A novel antiviral intervention results in more accurate assessment of human immunodeficiency virus type 1 replication dynamics and T-cell decay in vivo. J. Virol. 77 8 (2003) 263-277
-
(2003)
J. Virol.
, vol.77
, Issue.8
, pp. 263-277
-
-
Markowitz, M.1
Louie, M.2
Hurley, A.3
Sun, E.4
Di Mascio, M.5
Perelson, A.S.6
Ho, D.D.7
-
27
-
-
0027998192
-
Preparation for AIDS vaccine evaluation in Mombasa, Kenya: establishment of seronegative cohorts of commercial sex workers and trucking company employees.
-
Martin H.L., Jackson D.J., Mandaliya K., Bwayo J., Rakwar J.P., Nyange P., Moses S., Ndinya-Achola J.O., Holmes K., Plummer F., Ngugi E., and Kreiss J. Preparation for AIDS vaccine evaluation in Mombasa, Kenya: establishment of seronegative cohorts of commercial sex workers and trucking company employees. AIDS Res. Hum. Retrovir. 10 Suppl. 2 (1994) S235-S237
-
(1994)
AIDS Res. Hum. Retrovir.
, vol.10
, Issue.SUPPL. 2
-
-
Martin, H.L.1
Jackson, D.J.2
Mandaliya, K.3
Bwayo, J.4
Rakwar, J.P.5
Nyange, P.6
Moses, S.7
Ndinya-Achola, J.O.8
Holmes, K.9
Plummer, F.10
Ngugi, E.11
Kreiss, J.12
-
28
-
-
70349686331
-
Limited neutralizing antibody specificities drive neutralization escape in early HIV-1 subtype C infection
-
Moore P.L., Ranchobe N., Lambson B.E., Gray E.S., Cave E., Abrahams M.R., Bandawe G., Mlisana K., Abdool Karim S.S., Williamson C., and Morris L. Limited neutralizing antibody specificities drive neutralization escape in early HIV-1 subtype C infection. PLoS Pathog. 5 9 (2009) e1000598
-
(2009)
PLoS Pathog.
, vol.5
, Issue.9
-
-
Moore, P.L.1
Ranchobe, N.2
Lambson, B.E.3
Gray, E.S.4
Cave, E.5
Abrahams, M.R.6
Bandawe, G.7
Mlisana, K.8
Abdool Karim, S.S.9
Williamson, C.10
Morris, L.11
-
29
-
-
0032946954
-
Subtypes of human immunodeficiency virus type 1 and disease stage among women in Nairobi, Kenya.
-
Neilson J.R., John G.C., Carr J.K., Lewis P., Kreiss J.K., Jackson S., Nduati R.W., Mbori-Ngacha D., Panteleeff D.D., Bodrug S., Giachetti C., Bott M.A., Richardson B.A., Bwayo J., Ndinya-Achola J., and Overbaugh J. Subtypes of human immunodeficiency virus type 1 and disease stage among women in Nairobi, Kenya. J. Virol. 73 5 (1999) 4393-4403
-
(1999)
J. Virol.
, vol.73
, Issue.5
, pp. 4393-4403
-
-
Neilson, J.R.1
John, G.C.2
Carr, J.K.3
Lewis, P.4
Kreiss, J.K.5
Jackson, S.6
Nduati, R.W.7
Mbori-Ngacha, D.8
Panteleeff, D.D.9
Bodrug, S.10
Giachetti, C.11
Bott, M.A.12
Richardson, B.A.13
Bwayo, J.14
Ndinya-Achola, J.15
Overbaugh, J.16
-
30
-
-
0034974149
-
N-linked glycosylation sites adjacent to and within the V1/V2 and the V3 loops of dual tropic human immunodeficiency virus type 1 isolate DH12 gp120 affect coreceptor usage and cellular tropism
-
Ogert R.A., Lee M.K., Ross W., Buckler-White A., Martin M.A., and Cho M.W. N-linked glycosylation sites adjacent to and within the V1/V2 and the V3 loops of dual tropic human immunodeficiency virus type 1 isolate DH12 gp120 affect coreceptor usage and cellular tropism. J. Virol. 75 13 (2001) 5998-6006
-
(2001)
J. Virol.
, vol.75
, Issue.13
, pp. 5998-6006
-
-
Ogert, R.A.1
Lee, M.K.2
Ross, W.3
Buckler-White, A.4
Martin, M.A.5
Cho, M.W.6
-
31
-
-
0025841914
-
Variation in simian immunodeficiency virus env is confined to V1 and V4 during progression to simian AIDS
-
Overbaugh J., Rudensey L.M., Papenhausen M.D., Benveniste R.E., and Morton W.R. Variation in simian immunodeficiency virus env is confined to V1 and V4 during progression to simian AIDS. J. Virol. 65 12 (1991) 7025-7031
-
(1991)
J. Virol.
, vol.65
, Issue.12
, pp. 7025-7031
-
-
Overbaugh, J.1
Rudensey, L.M.2
Papenhausen, M.D.3
Benveniste, R.E.4
Morton, W.R.5
-
32
-
-
0029967721
-
HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time
-
Perelson A.S., Neumann A.U., Markowitz M., Leonard J.M., and Ho D.D. HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time. Science 271 5255 (1996) 1582-1586
-
(1996)
Science
, vol.271
, Issue.5255
, pp. 1582-1586
-
-
Perelson, A.S.1
Neumann, A.U.2
Markowitz, M.3
Leonard, J.M.4
Ho, D.D.5
-
33
-
-
0030952479
-
Decay characteristics of HIV-1-infected compartments during combination therapy
-
Perelson A.S., Essunger P., Cao Y., Vesanen M., Hurley A., Saksela K., Markowitz M., and Ho D.D. Decay characteristics of HIV-1-infected compartments during combination therapy. Nature 387 6629 (1997) 188-191
-
(1997)
Nature
, vol.387
, Issue.6629
, pp. 188-191
-
-
Perelson, A.S.1
Essunger, P.2
Cao, Y.3
Vesanen, M.4
Hurley, A.5
Saksela, K.6
Markowitz, M.7
Ho, D.D.8
-
34
-
-
70349298392
-
HIV-1 neutralizing antibody breadth is affected by factors early in infection, but does not influence disease progression
-
Piantadosi A., Panteleeff D., Blish C.A., Baeten J.M., Jaoko W., McClelland R.S., and Overbaugh J. HIV-1 neutralizing antibody breadth is affected by factors early in infection, but does not influence disease progression. J. Virol. 83 19 (2009) 10269-10274
-
(2009)
J. Virol.
, vol.83
, Issue.19
, pp. 10269-10274
-
-
Piantadosi, A.1
Panteleeff, D.2
Blish, C.A.3
Baeten, J.M.4
Jaoko, W.5
McClelland, R.S.6
Overbaugh, J.7
-
35
-
-
30344438528
-
No evidence for rapid subtype C spread within an epidemic in which multiple subtypes and intersubtype recombinants circulate
-
Rainwater S., Devange S., Sagar M., Ndinya-Achola J., Mandaliya K., Kreiss J.K., and Overbaugh J. No evidence for rapid subtype C spread within an epidemic in which multiple subtypes and intersubtype recombinants circulate. AIDS Res. Hum. Retrovir. 21 12 (2005) 1060-1065
-
(2005)
AIDS Res. Hum. Retrovir.
, vol.21
, Issue.12
, pp. 1060-1065
-
-
Rainwater, S.1
Devange, S.2
Sagar, M.3
Ndinya-Achola, J.4
Mandaliya, K.5
Kreiss, J.K.6
Overbaugh, J.7
-
36
-
-
33947600590
-
Cloning and characterization of functional subtype A HIV-1 envelope variants transmitted through breastfeeding
-
Rainwater S.M., Wu X., Nduati R., Nedellec R., Mosier D., John-Stewart G., Mbori-Ngacha D., and Overbaugh J. Cloning and characterization of functional subtype A HIV-1 envelope variants transmitted through breastfeeding. Curr. HIV Res. 5 2 (2007) 189-197
-
(2007)
Curr. HIV Res.
, vol.5
, Issue.2
, pp. 189-197
-
-
Rainwater, S.M.1
Wu, X.2
Nduati, R.3
Nedellec, R.4
Mosier, D.5
John-Stewart, G.6
Mbori-Ngacha, D.7
Overbaugh, J.8
-
37
-
-
0042208083
-
Role of the human immunodeficiency virus type 1 envelope gene in viral fitness
-
Rangel H.R., Weber J., Chakraborty B., Gutierrez A., Marotta M.L., Mirza M., Kiser P., Martinez M.A., Este J.A., and Quinones-Mateu M.E. Role of the human immunodeficiency virus type 1 envelope gene in viral fitness. J. Virol. 77 16 (2003) 9069-9073
-
(2003)
J. Virol.
, vol.77
, Issue.16
, pp. 9069-9073
-
-
Rangel, H.R.1
Weber, J.2
Chakraborty, B.3
Gutierrez, A.4
Marotta, M.L.5
Mirza, M.6
Kiser, P.7
Martinez, M.A.8
Este, J.A.9
Quinones-Mateu, M.E.10
-
38
-
-
0037389643
-
Rapid evolution of the neutralizing antibody response to HIV type 1 infection
-
Richman D.D., Wrin T., Little S.J., and Petropoulos C.J. Rapid evolution of the neutralizing antibody response to HIV type 1 infection. Proc. Natl. Acad. Sci. U. S. A. 100 7 (2003) 4144-4149
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, Issue.7
, pp. 4144-4149
-
-
Richman, D.D.1
Wrin, T.2
Little, S.J.3
Petropoulos, C.J.4
-
39
-
-
34249789875
-
Unique mutational patterns in the envelope alpha 2 amphipathic helix and acquisition of length in gp120 hypervariable domains are associated with resistance to autologous neutralization of subtype C human immunodeficiency virus type 1
-
Rong R., Gnanakaran S., Decker J.M., Bibollet-Ruche F., Taylor J., Sfakianos J.N., Mokili J.L., Muldoon M., Mulenga J., Allen S., Hahn B.H., Shaw G.M., Blackwell J.L., Korber B.T., Hunter E., and Derdeyn C.A. Unique mutational patterns in the envelope alpha 2 amphipathic helix and acquisition of length in gp120 hypervariable domains are associated with resistance to autologous neutralization of subtype C human immunodeficiency virus type 1. J. Virol. 81 11 (2007) 5658-5668
-
(2007)
J. Virol.
, vol.81
, Issue.11
, pp. 5658-5668
-
-
Rong, R.1
Gnanakaran, S.2
Decker, J.M.3
Bibollet-Ruche, F.4
Taylor, J.5
Sfakianos, J.N.6
Mokili, J.L.7
Muldoon, M.8
Mulenga, J.9
Allen, S.10
Hahn, B.H.11
Shaw, G.M.12
Blackwell, J.L.13
Korber, B.T.14
Hunter, E.15
Derdeyn, C.A.16
-
40
-
-
70349695689
-
Escape from autologous neutralizing antibodies in acute/early subtype C HIV-1 infection requires multiple pathways
-
Rong R., Li B., Lynch R.M., Haaland R.E., Murphy M.K., Mulenga J., Allen S.A., Pinter A., Shaw G.M., Hunter E., Robinson J.E., Gnanakaran S., and Derdeyn C.A. Escape from autologous neutralizing antibodies in acute/early subtype C HIV-1 infection requires multiple pathways. PLoS Pathog. 5 9 (2009) e1000594
-
(2009)
PLoS Pathog.
, vol.5
, Issue.9
-
-
Rong, R.1
Li, B.2
Lynch, R.M.3
Haaland, R.E.4
Murphy, M.K.5
Mulenga, J.6
Allen, S.A.7
Pinter, A.8
Shaw, G.M.9
Hunter, E.10
Robinson, J.E.11
Gnanakaran, S.12
Derdeyn, C.A.13
-
41
-
-
8444219998
-
Association of levels of HIV-1-infected breast milk cells and risk of mother-to-child transmission
-
Rousseau C.M., Nduati R.W., Richardson B.A., John-Stewart G.C., Mbori-Ngacha D.A., Kreiss J.K., and Overbaugh J. Association of levels of HIV-1-infected breast milk cells and risk of mother-to-child transmission. J. Infect. Dis. 190 10 (2004) 1880-1888
-
(2004)
J. Infect. Dis.
, vol.190
, Issue.10
, pp. 1880-1888
-
-
Rousseau, C.M.1
Nduati, R.W.2
Richardson, B.A.3
John-Stewart, G.C.4
Mbori-Ngacha, D.A.5
Kreiss, J.K.6
Overbaugh, J.7
-
42
-
-
0027409312
-
Replication and persistence of simian immunodeficiency virus variants after passage in macaque lymphocytes and established human cell lines
-
Rudensey L.M., Papenhausen M.D., and Overbaugh J. Replication and persistence of simian immunodeficiency virus variants after passage in macaque lymphocytes and established human cell lines. J. Virol. 67 3 (1993) 1727-1733
-
(1993)
J. Virol.
, vol.67
, Issue.3
, pp. 1727-1733
-
-
Rudensey, L.M.1
Papenhausen, M.D.2
Overbaugh, J.3
-
43
-
-
33748925430
-
Human immunodeficiency virus type 1 V1-V2 envelope loop sequences expand and add glycosylation sites over the course of infection, and these modifications affect antibody neutralization sensitivity
-
Sagar M., Wu X., Lee S., and Overbaugh J. Human immunodeficiency virus type 1 V1-V2 envelope loop sequences expand and add glycosylation sites over the course of infection, and these modifications affect antibody neutralization sensitivity. J. Virol. 80 19 (2006) 9586-9598
-
(2006)
J. Virol.
, vol.80
, Issue.19
, pp. 9586-9598
-
-
Sagar, M.1
Wu, X.2
Lee, S.3
Overbaugh, J.4
-
44
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
45
-
-
63849131879
-
Broad diversity of neutralizing antibodies isolated from memory B cells in HIV-infected individuals
-
Scheid J.F., Mouquet H., Feldhahn N., Seaman M.S., Velinzon K., Pietzsch J., Ott R.G., Anthony R.M., Zebroski H., Hurley A., Phogat A., Chakrabarti B., Li Y., Connors M., Pereyra F., Walker B.D., Wardemann H., Ho D., Wyatt R.T., Mascola J.R., Ravetch J.V., and Nussenzweig M.C. Broad diversity of neutralizing antibodies isolated from memory B cells in HIV-infected individuals. Nature 458 7238 (2009) 636-640
-
(2009)
Nature
, vol.458
, Issue.7238
, pp. 636-640
-
-
Scheid, J.F.1
Mouquet, H.2
Feldhahn, N.3
Seaman, M.S.4
Velinzon, K.5
Pietzsch, J.6
Ott, R.G.7
Anthony, R.M.8
Zebroski, H.9
Hurley, A.10
Phogat, A.11
Chakrabarti, B.12
Li, Y.13
Connors, M.14
Pereyra, F.15
Walker, B.D.16
Wardemann, H.17
Ho, D.18
Wyatt, R.T.19
Mascola, J.R.20
Ravetch, J.V.21
Nussenzweig, M.C.22
more..
-
46
-
-
24644493206
-
Human immunodeficiency virus type 1 variants isolated from single plasma samples display a wide spectrum of neutralization sensitivity
-
Skrabal K., Saragosti S., Labernardiere J.L., Barin F., Clavel F., and Mammano F. Human immunodeficiency virus type 1 variants isolated from single plasma samples display a wide spectrum of neutralization sensitivity. J. Virol. 79 18 (2005) 11848-11857
-
(2005)
J. Virol.
, vol.79
, Issue.18
, pp. 11848-11857
-
-
Skrabal, K.1
Saragosti, S.2
Labernardiere, J.L.3
Barin, F.4
Clavel, F.5
Mammano, F.6
-
47
-
-
0027204667
-
Effect of amino acid changes in the V1/V2 region of the human immunodeficiency virus type 1 gp120 glycoprotein on subunit association, syncytium formation, and recognition by a neutralizing antibody
-
Sullivan N., Thali M., Furman C., Ho D.D., and Sodroski J. Effect of amino acid changes in the V1/V2 region of the human immunodeficiency virus type 1 gp120 glycoprotein on subunit association, syncytium formation, and recognition by a neutralizing antibody. J. Virol. 67 6 (1993) 3674-3679
-
(1993)
J. Virol.
, vol.67
, Issue.6
, pp. 3674-3679
-
-
Sullivan, N.1
Thali, M.2
Furman, C.3
Ho, D.D.4
Sodroski, J.5
-
48
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 24 (1997) 4876-4882
-
(1997)
Nucleic Acids Res.
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
49
-
-
70349887757
-
Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target
-
Walker L.M., Phogat S.K., Chan-Hui P.Y., Wagner D., Phung P., Goss J.L., Wrin T., Simek M.D., Fling S., Mitcham J.L., Lehrman J.K., Priddy F.H., Olsen O.A., Frey S.M., Hammond P.W., Miiro G., Serwanga J., Pozniak A., McPhee D., Manigart O., Mwananyanda L., Karita E., Inwoley A., Jaoko W., Dehovitz J., Bekker L.G., Pitisuttithum P., Paris R., Allen S., Kaminsky S., Zamb T., Moyle M., Koff W.C., Poignard P., and Burton D.R. Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target. Science 326 (2009) 285-289
-
(2009)
Science
, vol.326
, pp. 285-289
-
-
Walker, L.M.1
Phogat, S.K.2
Chan-Hui, P.Y.3
Wagner, D.4
Phung, P.5
Goss, J.L.6
Wrin, T.7
Simek, M.D.8
Fling, S.9
Mitcham, J.L.10
Lehrman, J.K.11
Priddy, F.H.12
Olsen, O.A.13
Frey, S.M.14
Hammond, P.W.15
Miiro, G.16
Serwanga, J.17
Pozniak, A.18
McPhee, D.19
Manigart, O.20
Mwananyanda, L.21
Karita, E.22
Inwoley, A.23
Jaoko, W.24
Dehovitz, J.25
Bekker, L.G.26
Pitisuttithum, P.27
Paris, R.28
Allen, S.29
Kaminsky, S.30
Zamb, T.31
Moyle, M.32
Koff, W.C.33
Poignard, P.34
Burton, D.R.35
more..
-
50
-
-
0036090585
-
Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy
-
Wei X., Decker J.M., Liu H., Zhang Z., Arani R.B., Kilby J.M., Saag M.S., Wu X., Shaw G.M., and Kappes J.C. Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy. Antimicrob. Agents Chemother. 46 6 (2002) 1896-1905
-
(2002)
Antimicrob. Agents Chemother.
, vol.46
, Issue.6
, pp. 1896-1905
-
-
Wei, X.1
Decker, J.M.2
Liu, H.3
Zhang, Z.4
Arani, R.B.5
Kilby, J.M.6
Saag, M.S.7
Wu, X.8
Shaw, G.M.9
Kappes, J.C.10
-
51
-
-
0037456827
-
Antibody neutralization and escape by HIV-1
-
Wei X., Decker J.M., Wang S., Hui H., Kappes J.C., Wu X., Salazar-Gonzalez J.F., Salazar M.G., Kilby J.M., Saag M.S., Komarova N.L., Nowak M.A., Hahn B.H., Kwong P.D., and Shaw G.M. Antibody neutralization and escape by HIV-1. Nature 422 6929 (2003) 307-312
-
(2003)
Nature
, vol.422
, Issue.6929
, pp. 307-312
-
-
Wei, X.1
Decker, J.M.2
Wang, S.3
Hui, H.4
Kappes, J.C.5
Wu, X.6
Salazar-Gonzalez, J.F.7
Salazar, M.G.8
Kilby, J.M.9
Saag, M.S.10
Komarova, N.L.11
Nowak, M.A.12
Hahn, B.H.13
Kwong, P.D.14
Shaw, G.M.15
-
52
-
-
30344485709
-
Neutralization escape variants of human immunodeficiency virus type 1 are transmitted from mother to infant
-
Wu X., Parast A.B., Richardson B.A., Nduati R., John-Stewart G., Mbori-Ngacha D., Rainwater S.M., and Overbaugh J. Neutralization escape variants of human immunodeficiency virus type 1 are transmitted from mother to infant. J. Virol. 80 2 (2006) 835-844
-
(2006)
J. Virol.
, vol.80
, Issue.2
, pp. 835-844
-
-
Wu, X.1
Parast, A.B.2
Richardson, B.A.3
Nduati, R.4
John-Stewart, G.5
Mbori-Ngacha, D.6
Rainwater, S.M.7
Overbaugh, J.8
-
53
-
-
0036140259
-
A variable region 3 (V3) mutation determines a global neutralization phenotype and CD4-independent infectivity of a human immunodeficiency virus type 1 envelope associated with a broadly cross-reactive, primary virus-neutralizing antibody response
-
Zhang P.F., Bouma P., Park E.J., Margolick J.B., Robinson J.E., Zolla-Pazner S., Flora M.N., and Quinnan Jr. G.V. A variable region 3 (V3) mutation determines a global neutralization phenotype and CD4-independent infectivity of a human immunodeficiency virus type 1 envelope associated with a broadly cross-reactive, primary virus-neutralizing antibody response. J. Virol. 76 2 (2002) 644-655
-
(2002)
J. Virol.
, vol.76
, Issue.2
, pp. 644-655
-
-
Zhang, P.F.1
Bouma, P.2
Park, E.J.3
Margolick, J.B.4
Robinson, J.E.5
Zolla-Pazner, S.6
Flora, M.N.7
Quinnan Jr., G.V.8
-
54
-
-
34547154404
-
Extensively cross-reactive anti-HIV-1 neutralizing antibodies induced by gp140 immunization
-
Zhang P.F., Cham F., Dong M., Choudhary A., Bouma P., Zhang Z., Shao Y., Feng Y.R., Wang L., Mathy N., Voss G., Broder C.C., and Quinnan Jr. G.V. Extensively cross-reactive anti-HIV-1 neutralizing antibodies induced by gp140 immunization. Proc. Natl. Acad. Sci. U. S. A. 104 24 (2007) 10193-10198
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, Issue.24
, pp. 10193-10198
-
-
Zhang, P.F.1
Cham, F.2
Dong, M.3
Choudhary, A.4
Bouma, P.5
Zhang, Z.6
Shao, Y.7
Feng, Y.R.8
Wang, L.9
Mathy, N.10
Voss, G.11
Broder, C.C.12
Quinnan Jr., G.V.13
|