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Volumn 37, Issue 22, 2009, Pages 7394-7406

TMEM8 - A non-globin gene entrapped in the globin web

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA GLOBIN; GLOBIN; MEMBRANE PROTEIN; PROTEIN TMEM8; UNCLASSIFIED DRUG;

EID: 75649088893     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkp838     Document Type: Article
Times cited : (17)

References (48)
  • 3
    • 0035251691 scopus 로고    scopus 로고
    • Characterization of a widely expressed gene (LUC7-LIKE; LUC7L) defining the centromeric boundary of the human alpha-globin domain
    • Tufarelli, C., Frischauf, A.M., Hardison, R., Flint, J. and Higgs, D.R. (2001) Characterization of a widely expressed gene (LUC7-LIKE; LUC7L) defining the centromeric boundary of the human alpha-globin domain. Genomics, 71, 307-314.
    • (2001) Genomics , vol.71
    • Tufarelli, C.1    Frischauf, A.M.2    Hardison, R.3    Flint, J.4    Higgs, D.R.5
  • 4
    • 4744358230 scopus 로고    scopus 로고
    • Comparative analysis of the alpha-like globin clusters in mouse, rat, and human chromosomes indicates a mechanism underlying breaks in conserved synteny
    • Tufarelli, C., Hardison, R., Miller, W., Hughes, J., Clark, K., Ventress, N., Frischauf, A.M. and Higgs, D.R. (2004) Comparative analysis of the alpha-like globin clusters in mouse, rat, and human chromosomes indicates a mechanism underlying breaks in conserved synteny. Genome Res., 14, 623-630.
    • (2004) Genome Res. , vol.14 , pp. 623-630
    • Tufarelli, C.1    Hardison, R.2    Miller, W.3    Hughes, J.4    Clark, K.5    Ventress, N.6    Frischauf, A.M.7    Higgs, D.R.8
  • 5
    • 0033936743 scopus 로고    scopus 로고
    • Functional gene expression domains: defining the functional units of eukaryotic gene regulation
    • Dillon, N. and Sabbatini, P. (2000) Functional gene expression domains: defining the functional units of eukaryotic gene regulation. BioEssays, 22, 657-665.
    • (2000) BioEssays , vol.22 , pp. 657-665
    • Dillon, N.1    Sabbatini, P.2
  • 6
    • 0043072824 scopus 로고    scopus 로고
    • Genomic domains and regulatory elements operating at the domain level
    • Razin, S.V., Farrell, C.M. and Recillas-Targa, F. (2003) Genomic domains and regulatory elements operating at the domain level. Int. Rev. Cytol., 226, 63-125.
    • (2003) Int. Rev. Cytol. , vol.226 , pp. 63-125
    • Razin, S.V.1    Farrell, C.M.2    Recillas-Targa, F.3
  • 7
    • 33644521239 scopus 로고    scopus 로고
    • A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain
    • Klochkov, D., Rincon-Arano, H., Ioudinkova, E.S., Valadez-Graham, V., Gavrilov, A., Recillas-Targa, F. and Razin, S.V. (2006) A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain. Mol. Cell Biol., 26, 1589-1597.
    • (2006) Mol. Cell Biol. , vol.26 , pp. 1589-1597
    • Klochkov, D.1    Rincon-Arano, H.2    Ioudinkova, E.S.3    Valadez-Graham, V.4    Gavrilov, A.5    Recillas-Targa, F.6    Razin, S.V.7
  • 9
    • 0018702930 scopus 로고
    • Chicken hematopoietic cells transformed by seven strains of defective avian leukemia viruses display three distinct phenotypes of differentiation
    • Beug, H., Von Kirchbach, A., Doderlin, J., Conscience, J.F. and Graf, T. (1979) Chicken hematopoietic cells transformed by seven strains of defective avian leukemia viruses display three distinct phenotypes of differentiation. Cell, 18, 375-390.
    • (1979) Cell , vol.18 , pp. 375-390
    • Beug, H.1    Von Kirchbach, A.2    Doderlin, J.3    Conscience, J.F.4    Graf, T.5
  • 10
    • 0020010295 scopus 로고
    • A simple technique for preparation of chicken-embryo-skin cell cultures
    • Silim, A., El Azhary, M.A. and Roy, R.S. (1982) A simple technique for preparation of chicken-embryo-skin cell cultures. Avian Dis., 26, 182-185.
    • (1982) Avian Dis. , vol.26 , pp. 182-185
    • Silim, A.1    El Azhary, M.A.2    Roy, R.S.3
  • 11
    • 49249099730 scopus 로고    scopus 로고
    • Spatial configuration of the chicken {alpha}-globin gene domain: immature and active chromatin hubs
    • Gavrilov, A.A. and Razin, S.V. (2008) Spatial configuration of the chicken {alpha}-globin gene domain: immature and active chromatin hubs. Nucleic Acids Res., 36, 4629-4640.
    • (2008) Nucleic Acids Res. , vol.36 , pp. 4629-4640
    • Gavrilov, A.A.1    Razin, S.V.2
  • 12
    • 0018801412 scopus 로고
    • Effects of sodium butyrate on human chronic myelogenous leukaemia cell line K562
    • Lozzio, C.B., Lozzio, B.B., Machado, E.A., Fuhr, J.E., Lair, S.V. and Bamberger, E.G. (1979) Effects of sodium butyrate on human chronic myelogenous leukaemia cell line K562. Nature, 281, 709-710.
    • (1979) Nature , vol.281 , pp. 709-710
    • Lozzio, C.B.1    Lozzio, B.B.2    Machado, E.A.3    Fuhr, J.E.4    Lair, S.V.5    Bamberger, E.G.6
  • 13
    • 1642453552 scopus 로고    scopus 로고
    • 3C technology: analyzing the spatial organization of genomic loci in vivo
    • Splinter, E., Grosveld, F. and de Laat, W. (2004) 3C technology: analyzing the spatial organization of genomic loci in vivo. Methods Enzymol., 375, 493-507.
    • (2004) Methods Enzymol. , vol.375 , pp. 493-507
    • Splinter, E.1    Grosveld, F.2    de Laat, W.3
  • 14
    • 0028265082 scopus 로고
    • Characterization of the chromatin structure in the upstream area of the chicken α-globin gene domain
    • Razin, S.V., De Moura Gallo, C.V. and Scherrer, K. (1994) Characterization of the chromatin structure in the upstream area of the chicken α-globin gene domain. Mol. Gen. Genet., 242, 649-652.
    • (1994) Mol. Gen. Genet. , vol.242 , pp. 649-652
    • Razin, S.V.1    De Moura Gallo, C.V.2    Scherrer, K.3
  • 16
    • 0019878376 scopus 로고
    • Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis
    • Fried, M. and Crothers, D.M. (1981) Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis. Nulceic Acids Res., 9, 6505-6524.
    • (1981) Nulceic Acids Res. , vol.9 , pp. 6505-6524
    • Fried, M.1    Crothers, D.M.2
  • 17
    • 0020021436 scopus 로고
    • Erythroblast cell lines transformed by a temperature sensitive mutant of avian erythroblastosis virus. A model system to study erythroid differentiation in vitro
    • Beug, H., Doederlein, G., Freudenstrein, C. and Graf, T. (1979) Erythroblast cell lines transformed by a temperature sensitive mutant of avian erythroblastosis virus. A model system to study erythroid differentiation in vitro. J. Cell Physiol., 1, 195-207.
    • (1979) J. Cell Physiol. , vol.1 , pp. 195-207
    • Beug, H.1    Doederlein, G.2    Freudenstrein, C.3    Graf, T.4
  • 18
    • 64149100441 scopus 로고    scopus 로고
    • Early replication timing of the chicken alpha-globin gene domain correlates with its open chromatin state in cells of different lineages
    • Klochkov, D.B., Gavrilov, A.A., Vassetzky, Y.S. and Razin, S.V. (2009) Early replication timing of the chicken alpha-globin gene domain correlates with its open chromatin state in cells of different lineages. Genomics, 93, 481-486.
    • (2009) Genomics , vol.93 , pp. 481-486
    • Klochkov, D.B.1    Gavrilov, A.A.2    Vassetzky, Y.S.3    Razin, S.V.4
  • 19
    • 0042880630 scopus 로고    scopus 로고
    • Spatial organization of gene expression: the active chromatin hub
    • de Laat, W. and Grosveld, F. (2003) Spatial organization of gene expression: the active chromatin hub. Chromosome Res., 11, 447-459.
    • (2003) Chromosome Res. , vol.11 , pp. 447-459
    • de Laat, W.1    Grosveld, F.2
  • 21
    • 0018458970 scopus 로고
    • The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence
    • Wu, C., Bingham, P.M., Livak, K.J., Holmgren, R. and Elgin, S.C. (1979) The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence. Cell, 16, 797-806.
    • (1979) Cell , vol.16 , pp. 797-806
    • Wu, C.1    Bingham, P.M.2    Livak, K.J.3    Holmgren, R.4    Elgin, S.C.5
  • 22
    • 12344325677 scopus 로고    scopus 로고
    • GATA1 in normal and malignant hematopoiesis
    • Crispino, J.D. (2005) GATA1 in normal and malignant hematopoiesis. Semin. Cell Dev. Biol., 16, 137-147.
    • (2005) Semin. Cell Dev. Biol. , vol.16 , pp. 137-147
    • Crispino, J.D.1
  • 23
    • 0024556911 scopus 로고
    • Identification and characterization of a chicken α-globin enhancer
    • Knezetic, J. and Felsenfeld, G. (1989) Identification and characterization of a chicken α-globin enhancer. Mol. Cell Biol., 9, 893-901.
    • (1989) Mol. Cell Biol. , vol.9 , pp. 893-901
    • Knezetic, J.1    Felsenfeld, G.2
  • 24
    • 0026490544 scopus 로고
    • Use of gel retardation to analyze protein-nucleic acid interactions
    • Lane, D., Prentki, P. and Chandler, M. (1992) Use of gel retardation to analyze protein-nucleic acid interactions. Microbiol. Rev., 56, 509-528.
    • (1992) Microbiol. Rev. , vol.56 , pp. 509-528
    • Lane, D.1    Prentki, P.2    Chandler, M.3
  • 25
    • 0018159283 scopus 로고
    • Analysis of the adult and embryonic chicken globin genes in chromosomal DNA
    • Engel, J.D. and Dodgson, J.B. (1978) Analysis of the adult and embryonic chicken globin genes in chromosomal DNA. J. Biol. Chem., 253, 8239-8246.
    • (1978) J. Biol. Chem. , vol.253 , pp. 8239-8246
    • Engel, J.D.1    Dodgson, J.B.2
  • 26
    • 0019153996 scopus 로고
    • Analysis of the closely linked adult chicken alpha-globin genes in recombinant DNAs
    • Engel, J.D. and Dodgson, J.B. (1980) Analysis of the closely linked adult chicken alpha-globin genes in recombinant DNAs. Proc. Natl Acad. Sci. USA, 77, 2596-2600.
    • (1980) Proc. Natl Acad. Sci. USA , vol.77 , pp. 2596-2600
    • Engel, J.D.1    Dodgson, J.B.2
  • 27
    • 0020526715 scopus 로고
    • The nucleotide sequence of the adult chicken α-globin genes
    • Dodgson, J.B. and Engel, J.D. (1983) The nucleotide sequence of the adult chicken α-globin genes. J. Biol. Chem., 258, 4623-4629.
    • (1983) J. Biol. Chem. , vol.258 , pp. 4623-4629
    • Dodgson, J.B.1    Engel, J.D.2
  • 28
    • 0019878176 scopus 로고
    • Isolation and characterization of the complete chicken beta-globin gene region: frequent deletion of the adult beta-globin genes in lambda
    • Villeponteau, B. and Martinson, H. (1981) Isolation and characterization of the complete chicken beta-globin gene region: frequent deletion of the adult beta-globin genes in lambda. Nucleic Acids Res., 9, 3731-3746.
    • (1981) Nucleic Acids Res. , vol.9 , pp. 3731-3746
    • Villeponteau, B.1    Martinson, H.2
  • 29
    • 0020442436 scopus 로고
    • The chicken beta globin gene region. Delineation of transcription units and developmental regulation of interspersed DNA repeats
    • Villeponteau, B., Landes, G.M., Pankratz, M.J. and Martinson, H.G. (1982) The chicken beta globin gene region. Delineation of transcription units and developmental regulation of interspersed DNA repeats. J. Biol. Chem., 257, 11015-11023.
    • (1982) J. Biol. Chem. , vol.257 , pp. 11015-11023
    • Villeponteau, B.1    Landes, G.M.2    Pankratz, M.J.3    Martinson, H.G.4
  • 30
    • 0036227306 scopus 로고    scopus 로고
    • The human beta-globin locus control region
    • Levings, P.P. and Bungert, J. (2002) The human beta-globin locus control region. Eur. J. Biochem., 269, 1589-1599.
    • (2002) Eur. J. Biochem. , vol.269 , pp. 1589-1599
    • Levings, P.P.1    Bungert, J.2
  • 32
    • 39049092286 scopus 로고    scopus 로고
    • Beta-globin regulation and long-range interactions
    • Palstra, R.J., de Laat, W. and Grosveld, F. (2008) Beta-globin regulation and long-range interactions. Adv. Genet., 61, 107-142.
    • (2008) Adv. Genet. , vol.61 , pp. 107-142
    • Palstra, R.J.1    de Laat, W.2    Grosveld, F.3
  • 33
    • 39049083467 scopus 로고    scopus 로고
    • Long-range regulation of alpha-globin gene expression
    • Higgs, D.R., Vernimmen, D. and Wood, B. (2008) Long-range regulation of alpha-globin gene expression. Adv. Genet., 61, 143-173.
    • (2008) Adv. Genet. , vol.61 , pp. 143-173
    • Higgs, D.R.1    Vernimmen, D.2    Wood, B.3
  • 34
    • 35548990188 scopus 로고    scopus 로고
    • We gather together: insulators and genome organization
    • Wallace, J.A. and Felsenfeld, G. (2007) We gather together: insulators and genome organization. Curr. Opin. Genet. Dev., 17, 400-407.
    • (2007) Curr. Opin. Genet. Dev. , vol.17 , pp. 400-407
    • Wallace, J.A.1    Felsenfeld, G.2
  • 37
    • 0029013420 scopus 로고
    • Contrasting effects of alpha and beta globin regulatory elements on chromatin structure may be related to their different chromosomal environments
    • Craddock, C.F., Vyas, P., Sharpe, J.A., Ayyub, H., Wood, W.G. and Higgs, D.R. (1995) Contrasting effects of alpha and beta globin regulatory elements on chromatin structure may be related to their different chromosomal environments. EMBO J., 14, 1718-1726.
    • (1995) EMBO J. , vol.14 , pp. 1718-1726
    • Craddock, C.F.1    Vyas, P.2    Sharpe, J.A.3    Ayyub, H.4    Wood, W.G.5    Higgs, D.R.6
  • 38
    • 0024993211 scopus 로고
    • A major positive regulatory region located far upstream of the human α-globin gene locus
    • Higgs, D.R., Wood, W.G., Jarman, A.P., Sharpe, J., Lida, J., Pretorius, I.-M. and Ayyub, H. (1990) A major positive regulatory region located far upstream of the human α-globin gene locus. Genes Dev., 4, 1588-1601.
    • (1990) Genes Dev. , vol.4 , pp. 1588-1601
    • Higgs, D.R.1    Wood, W.G.2    Jarman, A.P.3    Sharpe, J.4    Lida, J.5    Pretorius, I.-M.6    Ayyub, H.7
  • 39
    • 0025734604 scopus 로고
    • Characterization of the major regulatory element upstream of the human a-globin gene cluster
    • Jarman, A.P., Wood, W.G., Sharpe, J.A., Gourdon, G., Ayyub, H. and Higgs, D.R. (1991) Characterization of the major regulatory element upstream of the human a-globin gene cluster. Mol. Cell Biol., 11, 4679-4689.
    • (1991) Mol. Cell Biol. , vol.11 , pp. 4679-4689
    • Jarman, A.P.1    Wood, W.G.2    Sharpe, J.A.3    Gourdon, G.4    Ayyub, H.5    Higgs, D.R.6
  • 41
    • 0028793262 scopus 로고
    • Conservation of position and sequence of a novel, widely expressed gene containing the major human alpha-globin regulatory element
    • Vyas, P., Vickers, M.A., Picketts, D.J. and Higgs, D.R. (1995) Conservation of position and sequence of a novel, widely expressed gene containing the major human alpha-globin regulatory element. Genomics, 29, 679-689.
    • (1995) Genomics , vol.29 , pp. 679-689
    • Vyas, P.1    Vickers, M.A.2    Picketts, D.J.3    Higgs, D.R.4
  • 42
    • 58649123384 scopus 로고    scopus 로고
    • In embryonic chicken erythrocytes actively transcribed alpha globin genes are not associated with the nuclear matrix
    • Iarovaia, O.V., Borounova, V.V., Philonenko, E.S., Kantidze, O.L., Vassetzky, Y.S. and Razin, S.V. (2009) In embryonic chicken erythrocytes actively transcribed alpha globin genes are not associated with the nuclear matrix. J. Cell Biochem., 106, 170-178.
    • (2009) J. Cell Biochem. , vol.106 , pp. 170-178
    • Iarovaia, O.V.1    Borounova, V.V.2    Philonenko, E.S.3    Kantidze, O.L.4    Vassetzky, Y.S.5    Razin, S.V.6
  • 43
    • 0035499440 scopus 로고    scopus 로고
    • In chicken leukemia cells globin genes are fully transcribed but their RNAs are retained in the perinucleolar area
    • Iarovaia, O., Razin, S.V., Linares-Cruz, G., Sjakste, N. and Scherrer, K. (2001) In chicken leukemia cells globin genes are fully transcribed but their RNAs are retained in the perinucleolar area. Exp. Cell Res., 270, 159-165.
    • (2001) Exp. Cell Res. , vol.270 , pp. 159-165
    • Iarovaia, O.1    Razin, S.V.2    Linares-Cruz, G.3    Sjakste, N.4    Scherrer, K.5
  • 44
    • 0029051646 scopus 로고
    • Transcription complex stability and chromatin dynamics in vivo
    • Wijgerde, M., Grosveld, F. and Fraser, P. (1995) Transcription complex stability and chromatin dynamics in vivo. Nature, 377, 209-213.
    • (1995) Nature , vol.377 , pp. 209-213
    • Wijgerde, M.1    Grosveld, F.2    Fraser, P.3
  • 46
    • 33745436025 scopus 로고    scopus 로고
    • Active chromatin hub of the mouse alpha-globin locus forms in a transcription factory of clustered housekeeping genes
    • Zhou, G.L., Xin, L., Song, W., Di, L.J., Liu, G., Wu, X.S., Liu, D.P. and Liang, C.C. (2006) Active chromatin hub of the mouse alpha-globin locus forms in a transcription factory of clustered housekeeping genes. Mol. Cell Biol., 26, 5096-5105.
    • (2006) Mol. Cell Biol. , vol.26 , pp. 5096-5105
    • Zhou, G.L.1    Xin, L.2    Song, W.3    Di, L.J.4    Liu, G.5    Wu, X.S.6    Liu, D.P.7    Liang, C.C.8
  • 47
    • 34447536151 scopus 로고    scopus 로고
    • Beta-globin active chromatin Hub formation in differentiating erythroid cells and in p45 NF-E2 knock-out mice
    • Kooren, J., Palstra, R.J., Klous, P., Splinter, E., von Lindern, M., Grosveld, F. and de Laat, W. (2007) Beta-globin active chromatin Hub formation in differentiating erythroid cells and in p45 NF-E2 knock-out mice. J. Biol. Chem., 282, 16544-16552.
    • (2007) J. Biol. Chem. , vol.282 , pp. 16544-16552
    • Kooren, J.1    Palstra, R.J.2    Klous, P.3    Splinter, E.4    von Lindern, M.5    Grosveld, F.6    de Laat, W.7
  • 48
    • 0036923833 scopus 로고    scopus 로고
    • Looping and interaction between hypersensitive sites in the active beta-globin locus
    • Tolhuis, B., Palstra, R.J., Splinter, E., Grosveld, F. and de Laat, W. (2002) Looping and interaction between hypersensitive sites in the active beta-globin locus. Mol. Cell, 10, 1453-1465.
    • (2002) Mol. Cell , vol.10 , pp. 1453-1465
    • Tolhuis, B.1    Palstra, R.J.2    Splinter, E.3    Grosveld, F.4    de Laat, W.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.