Molecular methods for the diagnosis of acute viral gastroenteritis;Pruebas moleculares en el diagnóstico de la gastroenteritis aguda causada por virus

Enfermedades Infecciosas y Microbiologia Clinica

Volumn 26, Issue SUPPL. 9, 2008, Pages 81-85

  Montes, Milagrosa ^a   Iturriza Gómara, Miren ^b  

^a HOSPITAL DONOSTIA   (Spain)

^b PUBLIC HEALTH ENGLAND   (United Kingdom)

Author keywords

Acute gastroenteritis; Infectious diarrhoea; Molecular biology; Norovirus; Rotavirus; Virus

Indexed keywords

ARTICLE; DIAGNOSTIC PROCEDURE; GENETIC TRAIT; HUMAN; LABORATORY TEST; NONHUMAN; NOROVIRUS; NUCLEIC ACID AMPLIFICATION; ROTAVIRUS; VIRAL GASTROENTERITIS; VIRUS DETECTION; VIRUS STRAIN; VIRUS TRANSMISSION;

ACUTE DISEASE; ADULT; CALICIVIRIDAE INFECTIONS; CHILD; CHILD, PRESCHOOL; EUROPE; GASTROENTERITIS; GENOME, VIRAL; HUMANS; INFANT; MOLECULAR DIAGNOSTIC TECHNIQUES; NOROVIRUS; POLYMERASE CHAIN REACTION; RNA, VIRAL; ROTAVIRUS; ROTAVIRUS INFECTIONS; SENSITIVITY AND SPECIFICITY; VIRAL LOAD; VIRUS DISEASES;

EID: 75149170251     PISSN: 0213005X     EISSN: 15781852     Source Type: Journal    
DOI: 10.1016/S0213-005X(08)76545-5     Document Type: Article

References (29)

1. U.D. Parashar, C.J. Gibson, J.S. Bresse, and R.I. Glass Rotavirus and severe childhood diarrhea Emerg Infect Dis 12 2006 304 306
2. R.E. Black, S.S. Morris, and J. Bryce Where and why are 10 million children dying every year? Lancet 361 2003 2226 2234 (Pubitemid 36782560)
3. M. Kosek, C. Bern, and R.L. Guerrant The global burden of diarrhoeal disease, as estimated from studies published between 1992 and 2000 Bull World Health Organ 81 2003 197 204 (Pubitemid 36372958)
4. S. Alain, and F. Denis Epidemiology of infectious acute diarrhoea in France and Europe Arch Pediatr 14 Suppl 3 2007 S132 S144
5. R. Simpson, S. Aliyu, M. Iturriza-Gómara, U. Desselberger, and J. Gray Infantile viral gastroenteritis: on the way to closing the diagnostic gap J Med Virol 70 2003 258 262 (Pubitemid 36520635)
6. C.F. Amar, C.L. East, J. Gray, M. Iturriza-Gomara, E.A. Maclure, and J. McLauchlin Detection by PCR of eight groups of enteric pathogens in 4,627 faecal samples: re-examination of the English case-control Infectious Intestinal Disease Study (1993-1996) Eur J Clin Microbiol Infect Dis 26 2007 311 323 (Pubitemid 46716797)
7. P.H. Dennehy, D.R. Gauntlett, and W.E. Tente Comparison of nine commercial immunoassays for the detection of rotavirus in fecal specimens J Clin Microbiol 26 1988 1630 1634 (Pubitemid 18208279)
8. F. Bon, P. Fascia, M. Dauvergne, D. Tenenbaum, H. Planson, and A.M. Petion Prevalence of group A rotavirus, human calicivirus, astrovirus, and adenovirus type 40 and 41 infections among children with acute gastroenteritis in Dijon, France J Clin Microbiol 37 1999 3055 3058 (Pubitemid 29391942)
9. X.L. Pang, S. Honma, S. Nakata, and T. Vesikari Human caliciviruses in acute gastroenteritis of young children in the community J Infect Dis 181 Suppl 2 2000 S288 S294
10. J. Vinjé, R.A. Hamidjaja, and M.D. Sobsey Development and application of a capsid VP1 (region D) based reverse transcription PCR assay for genotyping of genogroup I and II noroviruses J Virol Methods 116 2004 109 117 (Pubitemid 38117075)
11. J.A. Burton-MacLeod, E.M. Kane, R.S. Beard, L.A. Hadley, R.I. Glass, and T. Ando Evaluation and comparison of two commercial enzyme-linked immunosorbent assay kits for detection of antigenically diverse human noroviruses in stool samples J Clin Microbiol 42 2004 2587 2595 (Pubitemid 38747508)
12. E. De Bruin, E. Duizer, H. Vennema, and M.P. Koopmans Diagnosis of Norovirus outbreaks by commercial ELISA or RT-PCR J Virol Methods 137 2006 259 264 (Pubitemid 44397165)
13. J.J. Gray, E. Kohli, F.M. Ruggeri, H. Vennema, A. Sánchez- Fauquier, and E. Schreier European multicenter evaluation of commercial enzyme immunoassays for detecting norovirus antigen in fecal samples Clin Vaccine Immunol 14 2007 1349 1355 (Pubitemid 350012979)
14. R.N. Gunson, J. Miller, and W.F. Carman Comparison of real-time PCR and EIA for the detection of outbreaks of acute gastroenteritis caused by norovirus Commun Dis Public Health 6 2003 297 299
15. T. Kageyama, S. Kojima, M. Shinohara, K. Uchida, S. Fukushi, and F.B. Hoshino Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR J Clin Microbiol 41 2003 1548 1557 (Pubitemid 36428103)
16. J. Green, C.I. Gallimore, J.P. Norcott, D. Lewis, and D.W. Brown Broadly reactive reverse transcriptase polymerase chain reaction for the diagnosis of SRSV-associated gastroenteritis J Med Virol 47 1995 392 398 (Pubitemid 26018994)
17. G. Cilla, E. Pérez-Trallero, L.D. Piñeiro, A. Iturzaeta, and D. Vicente Hospitalizations for Rotavirus Gastroenteritis in Gipuzkoa (Basque Country), Spain Emerg Infect Dis 5 1999 834 835 (Pubitemid 30022475)
18. A. Gil, P. Carrasco, R. Jiménez, M. San-Martín, I. Oyagüez, and A. González Burden of hospitalizations attributable to rotavirus infection in children in Spain, period 1999-2000 Vaccine 22 2004 2221 2225 (Pubitemid 38626061)
19. T.K. Fischer Incidence of hospitalizations due to rotavirus gastroenteritis in Denmark Acta Paediatr 90 2001 1073 1075
20. M.D. Charles, R.C. Holman, A.T. Curns, U.D. Parashar, R.I. Glass, and J.S. Bresee Hospitalizations associated with rotavirus gastroenteritis in the United States, 1993-2002 Pediatr Infect Dis J 25 2006 489 493 (Pubitemid 43863357)
21. A. Sánchez-Fauquier, V. Montero, S. Moreno, M. Solé, J. Colomina, and M. Iturriza-Gomara Human rotavirus G9 and G3 as major cause of diarrhea in hospitalized children, Spain Emerg Infect Dis 12 2006 1536 1541 (Pubitemid 44570895)
22. M.S. Ho, R.I. Glass, P.F. Pinsky, and L.J. Anderson Rotavirus as a cause of diarrheal morbidity and mortality in the United States J Infect Dis 158 1988 1112 1116 (Pubitemid 18266069)
23. P.K. Lorgelly, D. Joshi, M. Iturriza Gómara, C. Flood, C.A. Hughes, J. Dalrymple, et al. Infantile gastroenteritis in the community: a cost-of-illness study Epidemiol Infect 136 2008 34 43
24. G. Cilla, E. Pérez-Trallero, M.C. López-Lopategui, A. Gil Setas, and M. Gomáriz Incidence, seasonality and serotypes of rotavirus in Gipuzkoa (Basque Country), Spain. A 14-year study Epidemiol Infect 125 2000 677 683 (Pubitemid 32156855)
25. C.J. Téllez Castillo, M.D. Tirado Balaguer, J. Colomer Revuelta, R. Moreno Muñoz, and J.M. Beltrán Garrido Ten-year retrospective study of rotavirus infection in the province of Castellón (Spain) An Pediatr (Barc) 68 2008 39 44
26. I. Banerjee, S. Ramani, B. Primrose, M. Iturriza-Gomara, J.J. Gray, D.W. Brown, et al. Modification of rotavirus multiplex RT-PCR for the detection of G12 strains based on characterization of emerging G12 rotavirus strains from South India J Med Virol 79 2007 1413 1421
27. C. Logan, J.J. O'Leary, and N. O'Sullivan Real-time reverse transcription-PCR for detection of rotavirus and adenovirus as causative agents of acute viral gastroenteritis in children J Clin Microbiol 44 2006 3189 3195 (Pubitemid 44413750)
28. L.E. Unicomb, G. Podder, J.R. Gentsch, P.A. Woods, K.Z. Hasan, and A.S. Faruque Evidence of high-frequency genomic reassortment of group A rotavirus strains in Bangladesh: emergence of type G9 in 1995 J Clin Microbiol 37 1999 1885 1891 (Pubitemid 29235241)
29. M. Rahman, J. Matthijnssens, X. Yang, T. Delbeke, I. Arijs, and K. Taniguchi Evolutionary history and global spread of the emerging G12 human rotaviruses J Virol 81 2007 2382 2390 (Pubitemid 46303355)