Evolution of a protein domain interaction network

Chinese Physics B

Volumn 19, Issue 1, 2010, Pages

  Gao, Li Feng ^a   Shi, Jian Jun ^b   Guan, Shan ^b  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b YANGZHOU UNIVERSITY   (China)

Author keywords

Complex network; Network evolution; Protein domain

Indexed keywords

BIOLOGICAL ORGANISMS; CLUSTERING COEFFICIENT; COMPLEX NETWORKS; EVOLUTIONARY RELATIONSHIPS; IN-NETWORK; INTERACTION NETWORKS; JOINING METHOD; LOW DEGREE; NEAREST NEIGHBOUR; NETWORK EVOLUTION; PROTEIN DOMAINS; SUB-NETWORK;

ACTIVE NETWORKS; LARGE SCALE SYSTEMS; PROTEINS;

COMPLEXATION;

EID: 74849102595     PISSN: 16741056     EISSN: None     Source Type: Journal    
DOI: 10.1088/1674-1056/19/1/010512     Document Type: Article

References (23)

1. Watts D J and Strogatz S 1998 Nature 393 440
2. Albert R and Barab́asi A L 2002 Rev. Mod. Phys. 74 47
3. Barab́asi A and Albert R 1999 Science 286 509
4. Gross T and Blasius B 2008 J. R. Soc. Interface 5 259
5. Yang H X, Gao K, Han X P and Wang B H 2008 Chin. Phys. B 17 2759
6. Guo R Y and Huang H J 2008 Chin. Phys. B 17 1698
7. Jeong H, Tombor B, Albert R, Oltvai Z and Barab́asi A L 2000 Nature 407 651
8. Fell D and Wagner A 2000 Nat. Biotechnol 189 1121
9. Wuchty S 2001 Mol. Biol. Evol. 18 1694
10. Apic G, Gough J and Teichmann S 2001 J. Mol. Biol. 310 311
11. Wuchty S 2002 Proteomics 2 1715
12. Wu C H, Apweiler R, Bairoch A, Natale D A, Barker W C, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R, Magrane M, Martin M J, Mazumder R, O'Donovan C, Redaschi N and Suzek B 2006 Nucleic Acids Res. 34 D187
13. Letunic I, Copley R R, Pils B, Pinkert S, Schultz J and Bork P 2006 Nucleic Acids Res. 34 D257
14. Finn R D, Mistry J, Schuster-Bockler B, Griffiths-Jones S Hollich V, Lassmann T, Moxon S, Marshall M and Khanna A 2006 Nucleic Acids Res. 34 D247
15. Mulder N J, Apweiler R, Attwood T K, Bairoch A, Bate-man A Binns D, Bork P, Buillard V and Cerutti L 2007 Nucleic Acids Res. 35 D224
16. Pagel P, Oesterheld M, Stümpflen V and Frishman D 2006 Bioinformatics 22 997
17. Raghavachari B, Tasneem A, Przytycka T and Jothi R 2008 Nucleic Acids Res. 36 D656
18. Hamming R W 1950 Bell Syst. Tech. J. 26 147
19. Wuchty S and Almaas E 2005 BMC Evol. Biol. 23 24
20. Woese C R and Fox G E 1977 Proc. Natl. Acad. Sci. USA 74 5088
21. Delsuc F, Brinkmann H and Philippe H 2005 Nat. Rev. Genet. 6 361
22. Brocchieri L 2001 Theor. Popul. Biol. 59 27
23. Palla G, Deŕenyi I, Farkas I and Vicsek T 2005 Nature 435 814.