MolDynGrid virtual laboratory as a part of Ukrainian Academic Grid infrastructure

Proceedings of the 5th IEEE International Workshop on Intelligent Data Acquisition and Advanced Computing Systems: Technology and Applications, IDAACS'2009

Volumn , Issue , 2009, Pages 237-240

  Salnikov, A O ^b   Sliusar, I A ^b   Sudakov, O O ^a,b   Savytskyi, O V ^a   Kornelyuk, A I ^a  

^a INSTITUTE OF MOLECULAR BIOLOGY AND GENETICS   (Ukraine)

^b TARAS SHEVCHENKO NATIONAL UNIVERSITY OF KYIV   (Ukraine)

Author keywords

Grid; GROMACS; Molecular dynamics; Virtual laboratory; Web portal

Indexed keywords

BIOLOGICAL MACROMOLECULE; COLLABORATIVE RESEARCH; COMPUTATIONAL BIOLOGY; GRID INFRASTRUCTURES; GROMACS; HIGH PROCESSING POWER; JOB PROCESSING; MD SIMULATION; MOLECULAR DYNAMICS SIMULATIONS; NMR SPECTROSCOPY; STORAGE SPACES; VIRTUAL LABORATORIES;

BIOINFORMATICS; BIOLOGY; LABORATORIES; MOLECULAR DYNAMICS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEIC ACIDS; PORTALS; TECHNOLOGY TRANSFER;

INDUSTRIAL RESEARCH;

EID: 74549196998     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IDAACS.2009.5342989     Document Type: Conference Paper

References (9)

1. F. Gagliardi, B. Jones, F. Grey, M.E. Bégin, M. Heikkurinen, "Building an infrastructure for scientific Grid computing: status and goals of the EGEE project," Philos Transact A Math Phys Eng Sci. 2005 363(1833), pp. 1729-1742.
2. L. Milanesi, I. Merelli, "High performance Grid based implementation for genomics and protein analysis," Stud Health Technol Inform. 2006;120, pp. 374-380.
3. A.I. Kornelyuk, ?.P. Mintser, "Modern computational Gridtechnologies and their applications in medical researches," Medical Informatics and Engineering, Vol. 1, ? 1, (2008), pp. 23-29.
4. MolDynGrid Vitual Laboratory, https://www.moldyngrid.org.
5. M. Zynovyev, S. Svistunov, O. Sudakov, Yu. Boyko, "Ukrainian Grid Infrastructure: Practical Experience," Proceedings of 4-th IEEE Workshop IDAACS 2007, September 6-8, 2007, Dortmund, Germany, ?p. 165-169.
6. A.O. Salnikov, I.A. Sliusar, O.O. Sudakov, Yu.V. Boyko, A.I. Kornelyuk, ''Implementing the File Storage System in the Ukrainian Academic Grid Infrastructure," Abstracts of 21th International CODATA Conference "Scientific Information for Society-from Today to the Future (October 5-8, 2008, Kyiv), p.31.
7. D. Van Der Spoel, E. Lindahl, B. Hess, G. Groenhof, A.E. Mark, H.J. Berendsen, "GROMACS: fast, flexible and free," J. Comput. Chem., 2005, 26, pp. 1701-1718.
8. A.O. Salnikov, I.A. Sliusar, O.O. Sudakov, Yu.V. Boyko, "Ukrainian GRID-Segment authorization system," Proceedings, III International Conference "Electronics and Applied Physics", October, 25-27, 2007, Kyiv, Ukraine, p. 163.
9. gLite 3.1 home page, 2008, http://www.glite.org.