메뉴 건너뛰기




Volumn 43, Issue 3, 2004, Pages 516-533

A text-mining system for knowledge discovery from biomedical documents

Author keywords

[No Author keywords available]

Indexed keywords

DATABASE SYSTEMS; HEALTH CARE; INFORMATION RETRIEVAL; MEDICINE; NATURAL LANGUAGE PROCESSING SYSTEMS; QUERY LANGUAGES; TEXT PROCESSING;

EID: 7444233821     PISSN: 00188670     EISSN: None     Source Type: Journal    
DOI: 10.1147/sj.433.0516     Document Type: Article
Times cited : (64)

References (49)
  • 4
    • 0025265976 scopus 로고
    • Medical literature as a potential source of new knowledge
    • D. Swanson, "Medical Literature as a Potential Source of New Knowledge," Bulletin of the Medical Library Association 78, No. 1, 29-37 (1990).
    • (1990) Bulletin of the Medical Library Association , vol.78 , Issue.1 , pp. 29-37
    • Swanson, D.1
  • 5
    • 0004694187 scopus 로고    scopus 로고
    • Knowledge discovery and data mining in biological databases
    • V. Brusic and J. Zeleznikow, "Knowledge Discovery and Data Mining in Biological Databases," Knowledge Engineering Review 14, No. 3, 257-277 (1999).
    • (1999) Knowledge Engineering Review , vol.14 , Issue.3 , pp. 257-277
    • Brusic, V.1    Zeleznikow, J.2
  • 6
    • 0031125707 scopus 로고    scopus 로고
    • An interactive system for finding complementary literatures: A stimulus to scientific discovery
    • D. Swanson and N. Smalheiser, "An Interactive System for Finding Complementary Literatures: A Stimulus to Scientific Discovery," Artificial Intelligence 91, No. 2, 183-203 (1997).
    • (1997) Artificial Intelligence , vol.91 , Issue.2 , pp. 183-203
    • Swanson, D.1    Smalheiser, N.2
  • 8
    • 85039504354 scopus 로고    scopus 로고
    • MEDLINE
    • MEDLINE, http://www.nlm.nih.gov/databases/databases⋯dline.html.
  • 10
    • 85039500689 scopus 로고    scopus 로고
    • Medical Subject Headings (MeSH)
    • Medical Subject Headings (MeSH), http://www.nlm.nih.gov/mesh /meshhome.html.
  • 11
    • 0032795144 scopus 로고    scopus 로고
    • MedMiner: An internet tool for filtering and organizing gene expression and pharmacological information
    • L. Tanabe, U. Scherf, L. Smith, J. Lee, L. Hunter, and J. Weinstein, "MedMiner: An Internet Tool for Filtering and Organizing Gene Expression and Pharmacological Information," BioTechniques 27, 1210-1217 (1999).
    • (1999) BioTechniques , vol.27 , pp. 1210-1217
    • Tanabe, L.1    Scherf, U.2    Smith, L.3    Lee, J.4    Hunter, L.5    Weinstein, J.6
  • 12
    • 85039510899 scopus 로고    scopus 로고
    • PubMed
    • PubMed, http://www.ncbi.nlm.nih.gov/entrez.
  • 13
    • 0035217671 scopus 로고    scopus 로고
    • Text analysis and knowledge mining system
    • T. Nasukawa and T. Nagano, "Text Analysis and Knowledge Mining System," IBM Systems Journal 40, No. 4, 967-984 (2001).
    • (2001) IBM Systems Journal , vol.40 , Issue.4 , pp. 967-984
    • Nasukawa, T.1    Nagano, T.2
  • 15
    • 0034707204 scopus 로고    scopus 로고
    • Using BLAST for identifying gene and protein names in journal articles
    • M. Krauthammer, A. Rzhetsky, P. Morozov, and C. Friedman, "Using BLAST for Identifying Gene and Protein Names in Journal Articles," Gene 259, No. 1-2, 245-252 (2000).
    • (2000) Gene , vol.259 , Issue.1-2 , pp. 245-252
    • Krauthammer, M.1    Rzhetsky, A.2    Morozov, P.3    Friedman, C.4
  • 17
    • 0035224502 scopus 로고    scopus 로고
    • Disambiguating proteins, genes, and RNA in text: A machine learning approach
    • V. Hatzivassiloglou, P. Duboue, and A. Rzhetsky, "Disambiguating Proteins, Genes, and RNA in Text: A Machine Learning Approach," Bioinformatics 17, Suppl. 1, S97-106 (2001).
    • (2001) Bioinformatics , vol.17 , Issue.1 SUPPL.
    • Hatzivassiloglou, V.1    Duboue, P.2    Rzhetsky, A.3
  • 21
    • 0002284942 scopus 로고    scopus 로고
    • Identifying the interaction between genes and gene products based on frequently seen verbs in MEDLINE abstracts
    • T. Sekimizu, H. Park, and J. Tsujii, "Identifying the Interaction between Genes and Gene Products Based on Frequently Seen Verbs in MEDLINE Abstracts," Genome Informatics, 62-71 (1998).
    • (1998) Genome Informatics , pp. 62-71
    • Sekimizu, T.1    Park, H.2    Tsujii, J.3
  • 24
    • 0035236048 scopus 로고    scopus 로고
    • GENIES: A natural-language processing system for the extraction of molecular pathways from journal articles
    • C. Friedman, P. Kra, H. Yu, M. Krauthammer, and A. Rzhetsky, "GENIES: A Natural-Language Processing System for the Extraction of Molecular Pathways from Journal Articles," Bioinformatics 17, Suppl. 1, S74-82 (2001).
    • (2001) Bioinformatics , vol.17 , Issue.1 SUPPL.
    • Friedman, C.1    Kra, P.2    Yu, H.3    Krauthammer, M.4    Rzhetsky, A.5
  • 25
    • 0035230208 scopus 로고    scopus 로고
    • Bidirectional incremental parsing for automatic pathway identification with combinatory categorical grammar
    • Kohala Coast, HI
    • J. Park, H. Kim, and J. Kim, "Bidirectional Incremental Parsing for Automatic Pathway Identification with Combinatory Categorical Grammar," Proceedings of the Pacific Symposium on Biocomputing '01 (PSB'01), Kohala Coast, HI (2001), pp. 396-407.
    • (2001) Proceedings of the Pacific Symposium on Biocomputing '01 (PSB'01) , pp. 396-407
    • Park, J.1    Kim, H.2    J. Kim3
  • 27
    • 0141515736 scopus 로고    scopus 로고
    • MedScan, a natural language processing engine for MEDLINE abstracts
    • S. Novichkova, S. Egorov, and N. Daraselia, "MedScan, a Natural Language Processing Engine for MEDLINE Abstracts," Bioinformatics 19, No. 13, 1699-1706 (2003).
    • (2003) Bioinformatics , vol.19 , Issue.13 , pp. 1699-1706
    • Novichkova, S.1    Egorov, S.2    Daraselia, N.3
  • 30
    • 0033643234 scopus 로고    scopus 로고
    • Two applications of information extraction to biological science journal articles: Enzyme interactions and protein structures
    • Honolulu, HI
    • K. Humphreys, G. Demetriou, and R. Gaizauskas, "Two Applications of Information Extraction to Biological Science Journal Articles: Enzyme Interactions and Protein Structures," Proceedings of the Pacific Symposium on Biocomputing '00 (PSB'00), Honolulu, HI (2000), pp. 502-513.
    • (2000) Proceedings of the Pacific Symposium on Biocomputing '00 (PSB'00) , pp. 502-513
    • Humphreys, K.1    Demetriou, G.2    Gaizauskas, R.3
  • 31
  • 33
    • 0035002541 scopus 로고    scopus 로고
    • Mining literature for protein-protein interactions
    • E. Marcotte, I. Xenarios, and D. Eisenberg, "Mining Literature for Protein-Protein Interactions" Bioinformatics 17, No. 4, 359-363 (2001).
    • (2001) Bioinformatics , vol.17 , Issue.4 , pp. 359-363
    • Marcotte, E.1    Xenarios, I.2    Eisenberg, D.3
  • 34
    • 0033655017 scopus 로고    scopus 로고
    • Biobibliometrics: Information retrieval and visualization from co-occurrences of gene names in MEDLINE abstracts
    • Honolulu, HI
    • B. Stapley and G. Benoit, "Biobibliometrics: Information Retrieval and Visualization from Co-occurrences of Gene Names in MEDLINE Abstracts," Proceedings of the Pacific Symposium on Biocomputing '00 (PSB'00), Honolulu, HI (2000), pp. 529-540.
    • (2000) Proceedings of the Pacific Symposium on Biocomputing '00 (PSB'00) , pp. 529-540
    • Stapley, B.1    Benoit, G.2
  • 35
    • 85039495954 scopus 로고    scopus 로고
    • National Center for Biotechnology Information
    • National Center for Biotechnology Information, http:/ /www.ncbi.nlm.nih.gov/.
  • 36
    • 85039497589 scopus 로고    scopus 로고
    • United States National Library of Medicine
    • United States National Library of Medicine, http://www.nlm.nih.gov/.
  • 37
    • 85039489378 scopus 로고    scopus 로고
    • MeSH Browser
    • MeSH Browser, http://www.nlm.nih.gov/mesh/MBrowser.html.
  • 39
    • 85039501123 scopus 로고    scopus 로고
    • Unified Medical Language System
    • Unified Medical Language System, http://www.nlm.nih.gov/research/umls /umlsmain.html.
  • 42
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • H. Akaike, "A New Look at the Statistical Model Identification," IEEE Transactions on Automatic Control 19, 716-723 (1974).
    • (1974) IEEE Transactions on Automatic Control , vol.19 , pp. 716-723
    • Akaike, H.1
  • 43
    • 85039505706 scopus 로고    scopus 로고
    • LocusLink
    • LocusLink, http://www.ncbi.nih.gov/LocusLink/.
  • 46
    • 0035455653 scopus 로고    scopus 로고
    • The anatomy of the grid: Enabling scalable virtual organizations
    • I. Foster, C. Kesselman, and S. Tuecke, "The Anatomy of the Grid: Enabling Scalable Virtual Organizations," International Journal of Supercomputer Applications 15, No. 3, 200-222 (2001), http://www.globus.org/research/papers/anatomy.pdf.
    • (2001) International Journal of Supercomputer Applications , vol.15 , Issue.3 , pp. 200-222
    • Foster, I.1    Kesselman, C.2    Tuecke, S.3
  • 47
    • 0003982659 scopus 로고    scopus 로고
    • I. Foster and C. Kesselman, Editors, (2nd Edition) Morgan Kaufmann Publishing, Inc., San Francisco, CA
    • The Grid 2: Blueprint for a New Computing Infrastructure (2nd Edition), I. Foster and C. Kesselman, Editors, Morgan Kaufmann Publishing, Inc., San Francisco, CA (2003).
    • (2003) The Grid 2: Blueprint for a New Computing Infrastructure
  • 48
    • 7444255622 scopus 로고    scopus 로고
    • Building an example application with the unstructured information management architecture
    • this issue
    • D. Ferrucci and A. Lally, "Building an Example Application with the Unstructured Information Management Architecture," IBM Systems Journal 43, No. 3, 455-475 (2004, this issue).
    • (2004) IBM Systems Journal , vol.43 , Issue.3 , pp. 455-475
    • Ferrucci, D.1    Lally, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.