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Volumn 20, Issue 12, 2004, Pages 631-639

Mammalian phylogenomics comes of age

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOME; CHROMOSOME PAINTING; DNA SEQUENCE; FLUORESCENCE IN SITU HYBRIDIZATION; GENE REARRANGEMENT; GENE SEQUENCE; GENOMICS; HUMAN; HUMAN GENOME; MAMMAL; MARSUPIAL; MOLECULAR EVOLUTION; MOLECULAR PHYLOGENY; MONOTREMATE; NONHUMAN; PHYLOGENOMICS; PLACENTAL MAMMALS; PRIORITY JOURNAL; RADIATION HYBRID MAPPING; REVIEW; SPECIES COMPARISON;

EID: 7444233609     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2004.09.005     Document Type: Review
Times cited : (290)

References (86)
  • 1
    • 0033569387 scopus 로고    scopus 로고
    • The promise of comparative genomics in mammals
    • S.J. O'Brien The promise of comparative genomics in mammals Science 286 1999 458 481
    • (1999) Science , vol.286 , pp. 458-481
    • O'Brien, S.J.1
  • 2
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Waterston Initial sequencing and comparative analysis of the mouse genome Nature 420 2002 520 562
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston1
  • 3
    • 1842684068 scopus 로고    scopus 로고
    • Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    • R.A. Gibbs Genome sequence of the Brown Norway rat yields insights into mammalian evolution Nature 428 2004 493 521
    • (2004) Nature , vol.428 , pp. 493-521
    • Gibbs, R.A.1
  • 4
    • 0035943027 scopus 로고    scopus 로고
    • Mammalian phylogeny: Genes and supertrees
    • M.J. Novacek Mammalian phylogeny: genes and supertrees Curr. Biol. 11 2001 R573 R575
    • (2001) Curr. Biol. , vol.11
    • Novacek, M.J.1
  • 5
    • 0037286424 scopus 로고    scopus 로고
    • Major mammalian clades: A review under consideration of molecular and palaeontological evidence
    • K.M. Helgen Major mammalian clades: a review under consideration of molecular and palaeontological evidence Mamm. Biol. 68 2003 1 15
    • (2003) Mamm. Biol. , vol.68 , pp. 1-15
    • Helgen, K.M.1
  • 6
    • 0024382879 scopus 로고
    • Dynamics of mitochondrial DNA evolution in animals: Amplification and sequencing with conserved primers
    • T.D. Kocher Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers Proc. Natl. Acad. Sci. U. S. A. 86 1989 6196 6200
    • (1989) Proc. Natl. Acad. Sci. U. S. A. , vol.86 , pp. 6196-6200
    • Kocher, T.D.1
  • 7
    • 0030837454 scopus 로고    scopus 로고
    • Endemic African mammals shake the phylogenetic tree
    • M.S. Springer Endemic African mammals shake the phylogenetic tree Nature 388 1997 61 64
    • (1997) Nature , vol.388 , pp. 61-64
    • Springer, M.S.1
  • 8
    • 0031459895 scopus 로고    scopus 로고
    • The interphotoreceptor retinoid binding protein gene in therian mammals: Implications for higher level relationships and evidence for loss of function in the marsupial mole
    • M.S. Springer The interphotoreceptor retinoid binding protein gene in therian mammals: implications for higher level relationships and evidence for loss of function in the marsupial mole Proc. Natl. Acad. Sci. U. S. A. 94 1997 13754 13759
    • (1997) Proc. Natl. Acad. Sci. U. S. A. , vol.94 , pp. 13754-13759
    • Springer, M.S.1
  • 9
    • 0032544017 scopus 로고    scopus 로고
    • Molecular support for multiple origins of insectivora and for a new order of endemic African insectivore mammals
    • M.J. Stanhope Molecular support for multiple origins of insectivora and for a new order of endemic African insectivore mammals Proc. Natl. Acad. Sci. U. S. A. 95 1998 9967 9972
    • (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 9967-9972
    • Stanhope, M.J.1
  • 10
    • 0032087258 scopus 로고    scopus 로고
    • Highly congruent molecular support for a diverse superordinal clade of endemic African mammals
    • M.J. Stanhope Highly congruent molecular support for a diverse superordinal clade of endemic African mammals Mol. Phylogenet. Evol. 9 1998 501 508
    • (1998) Mol. Phylogenet. Evol. , vol.9 , pp. 501-508
    • Stanhope, M.J.1
  • 11
    • 0029669270 scopus 로고    scopus 로고
    • Continental breakup and the ordinal diversification of mammals
    • S.B. Hedges Continental breakup and the ordinal diversification of mammals Nature 381 1996 226 229
    • (1996) Nature , vol.381 , pp. 226-229
    • Hedges, S.B.1
  • 12
    • 0032580152 scopus 로고    scopus 로고
    • A molecular timescale for vertebrate evolution
    • S. Kumar, and S.B. Hedges A molecular timescale for vertebrate evolution Nature 392 1998 917 920
    • (1998) Nature , vol.392 , pp. 917-920
    • Kumar, S.1    Hedges, S.B.2
  • 13
    • 0035252569 scopus 로고    scopus 로고
    • Parallel adaptive radiations in two major clades of placental mammals
    • O. Madsen Parallel adaptive radiations in two major clades of placental mammals Nature 409 2001 610 614
    • (2001) Nature , vol.409 , pp. 610-614
    • Madsen, O.1
  • 14
    • 0035252080 scopus 로고    scopus 로고
    • Molecular phylogenetics and the origins of placental mammals
    • W.J. Murphy Molecular phylogenetics and the origins of placental mammals Nature 409 2001 614 618
    • (2001) Nature , vol.409 , pp. 614-618
    • Murphy, W.J.1
  • 15
    • 0035861441 scopus 로고    scopus 로고
    • Resolution of the early placental mammal radiation using Bayesian phylogenetics
    • W.J. Murphy Resolution of the early placental mammal radiation using Bayesian phylogenetics Science 294 2001 2348 2351
    • (2001) Science , vol.294 , pp. 2348-2351
    • Murphy, W.J.1
  • 16
    • 0034988036 scopus 로고    scopus 로고
    • Molecular dating and biogeography of the early placental mammal radiation
    • E. Eizirik Molecular dating and biogeography of the early placental mammal radiation J. Hered. 92 2001 212 219
    • (2001) J. Hered. , vol.92 , pp. 212-219
    • Eizirik, E.1
  • 17
    • 0141609704 scopus 로고    scopus 로고
    • A new phylogenetic marker, apolipoprotein B, provides compelling evidence for eutherian relationships
    • H. Amrine-Madsen A new phylogenetic marker, apolipoprotein B, provides compelling evidence for eutherian relationships Mol. Phylogenet. Evol. 28 2003 225 240
    • (2003) Mol. Phylogenet. Evol. , vol.28 , pp. 225-240
    • Amrine-Madsen, H.1
  • 18
    • 0037417891 scopus 로고    scopus 로고
    • Placental mammal diversification and the Cretaceous-Tertiary boundary
    • M.S. Springer Placental mammal diversification and the Cretaceous-Tertiary boundary Proc. Natl. Acad. Sci. U. S. A. 100 2003 1056 1061
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 1056-1061
    • Springer, M.S.1
  • 19
    • 0141721427 scopus 로고    scopus 로고
    • Nuclear gene sequences provide evidence for the monophyly of australidelphian marsupials
    • H. Amrine-Madsen Nuclear gene sequences provide evidence for the monophyly of australidelphian marsupials Mol. Phylogenet. Evol. 28 2003 186 196
    • (2003) Mol. Phylogenet. Evol. , vol.28 , pp. 186-196
    • Amrine-Madsen, H.1
  • 20
    • 0347380991 scopus 로고    scopus 로고
    • Radiation of extant marsupials after the K/T boundary: Evidence from complete mitochondrial genomes
    • M.A. Nilsson Radiation of extant marsupials after the K/T boundary: evidence from complete mitochondrial genomes J. Mol. Evol. 57 Suppl. 1 2003 S3 12
    • (2003) J. Mol. Evol. , vol.57 , Issue.1
    • Nilsson, M.A.1
  • 21
    • 0001398527 scopus 로고
    • A new appraisal of marsupial phylogeny and classification
    • M. Archer Royal Zoological Society of New South Wales Mosman, Australia
    • X. Szalay A new appraisal of marsupial phylogeny and classification M. Archer Carnivorous marsupials 1982 Royal Zoological Society of New South Wales Mosman, Australia 621 640
    • (1982) Carnivorous Marsupials , pp. 621-640
    • Szalay, X.1
  • 22
    • 0344243994 scopus 로고
    • Families of marsupials: Relationships, evolution and biogeography
    • (Broadhead, T.W. ed.), University of Tennessee, Knoxsville
    • Woodburne, M.O. (1984) Families of marsupials: relationships, evolution and biogeography. In Mammals: notes for a short course, studies in geology (Vol. 8) (Broadhead, T.W. ed.), pp. 48-71, University of Tennessee, Knoxsville
    • (1984) Mammals: Notes for a Short Course, Studies in Geology , vol.8 , pp. 48-71
    • Woodburne, M.O.1
  • 23
    • 0036803193 scopus 로고    scopus 로고
    • Marsupial genetics and genomics
    • J.A. Graves, and M. Westerman Marsupial genetics and genomics Trends Genet. 18 2002 517 521
    • (2002) Trends Genet. , vol.18 , pp. 517-521
    • Graves, J.A.1    Westerman, M.2
  • 24
    • 0141609681 scopus 로고    scopus 로고
    • The evolution of tribospheny and the antiquity of mammalian clades
    • M.O. Woodburne The evolution of tribospheny and the antiquity of mammalian clades Mol. Phylogenet. Evol. 28 2003 360 385
    • (2003) Mol. Phylogenet. Evol. , vol.28 , pp. 360-385
    • Woodburne, M.O.1
  • 25
    • 0031026266 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria
    • A. Janke The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria Proc. Natl. Acad. Sci. U. S. A. 94 1997 1276 1281
    • (1997) Proc. Natl. Acad. Sci. U. S. A. , vol.94 , pp. 1276-1281
    • Janke, A.1
  • 26
    • 0036133006 scopus 로고    scopus 로고
    • Phylogenetic analysis of 18S rRNA and the mitochondrial genomes of the wombat, Vombatus ursinus, and the spiny anteater, Tachyglossus aculeatus: Increased support for the Marsupionta hypothesis
    • A. Janke Phylogenetic analysis of 18S rRNA and the mitochondrial genomes of the wombat, Vombatus ursinus, and the spiny anteater, Tachyglossus aculeatus: increased support for the Marsupionta hypothesis J. Mol. Evol. 54 2002 71 80
    • (2002) J. Mol. Evol. , vol.54 , pp. 71-80
    • Janke, A.1
  • 27
    • 0034967880 scopus 로고    scopus 로고
    • Marsupials and eutherians reunited: Genetic evidence for the Theria hypothesis of mammalian evolution
    • J.K. Killian Marsupials and eutherians reunited: genetic evidence for the Theria hypothesis of mammalian evolution Mamm. Genome 12 2001 513 517
    • (2001) Mamm. Genome , vol.12 , pp. 513-517
    • Killian, J.K.1
  • 28
    • 0036856238 scopus 로고    scopus 로고
    • Echidna IgA supports mammalian unity and traditional Therian relationship
    • K. Belov Echidna IgA supports mammalian unity and traditional Therian relationship Mamm. Genome 13 2002 656 663
    • (2002) Mamm. Genome , vol.13 , pp. 656-663
    • Belov, K.1
  • 29
    • 0344243515 scopus 로고    scopus 로고
    • Reanalysis of Murphy et al.'s data gives various phylogenies and suggests overcredibility of Bayesian trees
    • K. Misawa, and M. Nei Reanalysis of Murphy et al.'s data gives various phylogenies and suggests overcredibility of Bayesian trees J. Mol. Evol. 57 Suppl. 1 2003 S290 296
    • (2003) J. Mol. Evol. , vol.57 , Issue.1
    • Misawa, K.1    Nei, M.2
  • 30
    • 0141832717 scopus 로고    scopus 로고
    • Revisiting the Glires concept - Phylogenetic analysis of nuclear sequences
    • K. Misawa, and A. Janke Revisiting the Glires concept - phylogenetic analysis of nuclear sequences Mol. Phylogenet. Evol. 28 2003 320 327
    • (2003) Mol. Phylogenet. Evol. , vol.28 , pp. 320-327
    • Misawa, K.1    Janke, A.2
  • 31
    • 2942544728 scopus 로고    scopus 로고
    • Mammalian biology: More genomes but shallower coverage
    • E. Pennisi Mammalian biology: more genomes but shallower coverage Science 304 2004 1227
    • (2004) Science , vol.304 , pp. 1227
    • Pennisi, E.1
  • 32
    • 0036468881 scopus 로고    scopus 로고
    • Vertebrate genome sequencing: Building a backbone for comparative genomics
    • J.W. Thomas, and J.W. Touchman Vertebrate genome sequencing: building a backbone for comparative genomics Trends Genet. 18 2002 104 108
    • (2002) Trends Genet. , vol.18 , pp. 104-108
    • Thomas, J.W.1    Touchman, J.W.2
  • 33
    • 0041465867 scopus 로고    scopus 로고
    • Comparative analyses of multi-species sequences from targeted genomic regions
    • J.W. Thomas Comparative analyses of multi-species sequences from targeted genomic regions Nature 424 2003 788 793
    • (2003) Nature , vol.424 , pp. 788-793
    • Thomas, J.W.1
  • 34
    • 0141596080 scopus 로고    scopus 로고
    • The dog genome: Survey sequence and analysis
    • E.F. Kirkness The dog genome: survey sequence and analysis Science 301 2003 1898 1903
    • (2003) Science , vol.301 , pp. 1898-1903
    • Kirkness, E.F.1
  • 35
    • 0037387452 scopus 로고    scopus 로고
    • Ancient SINEs from African endemic mammals
    • M. Nikaido Ancient SINEs from African endemic mammals Mol. Biol. Evol. 20 2003 522 527
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 522-527
    • Nikaido, M.1
  • 36
    • 0033604476 scopus 로고    scopus 로고
    • Phylogenomics. Ancestral primate viewed
    • S.J. O'Brien, and R. Stanyon Phylogenomics. Ancestral primate viewed Nature 402 1999 365 366
    • (1999) Nature , vol.402 , pp. 365-366
    • O'Brien, S.J.1    Stanyon, R.2
  • 37
    • 0036196627 scopus 로고    scopus 로고
    • Chromosome painting reveals that galagos have highly derived karyotypes
    • R. Stanyon Chromosome painting reveals that galagos have highly derived karyotypes Am. J. Phys. Anthropol. 117 2002 319 326
    • (2002) Am. J. Phys. Anthropol. , vol.117 , pp. 319-326
    • Stanyon, R.1
  • 38
    • 0032468726 scopus 로고    scopus 로고
    • Comparative genomics: Tracking chromosome evolution in the family Ursidae using reciprocal chromosome painting
    • W.G. Nash Comparative genomics: tracking chromosome evolution in the family Ursidae using reciprocal chromosome painting Cytogenet. Cell Genet. 83 1998 182 192
    • (1998) Cytogenet. Cell Genet. , vol.83 , pp. 182-192
    • Nash, W.G.1
  • 39
    • 0036281578 scopus 로고    scopus 로고
    • The pattern of phylogenomic evolution of the Canidae
    • W.G. Nash The pattern of phylogenomic evolution of the Canidae Cytogenet. Cell Genet. 95 2001 210 224
    • (2001) Cytogenet. Cell Genet. , vol.95 , pp. 210-224
    • Nash, W.G.1
  • 40
    • 0036048574 scopus 로고    scopus 로고
    • Comparative molecular cytogenetic studies in the order Carnivora: Mapping chromosomal rearrangements onto the phylogenetic tree
    • A.S. Graphodatsky Comparative molecular cytogenetic studies in the order Carnivora: mapping chromosomal rearrangements onto the phylogenetic tree Cytogenet. Genome Res. 96 2002 137 145
    • (2002) Cytogenet. Genome Res. , vol.96 , pp. 137-145
    • Graphodatsky, A.S.1
  • 41
    • 0037417981 scopus 로고    scopus 로고
    • Reciprocal chromosome painting among human, aardvark and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype
    • F. Yang Reciprocal chromosome painting among human, aardvark and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype Proc. Natl. Acad. Sci. U. S. A. 100 2003 1062 1066
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 1062-1066
    • Yang, F.1
  • 42
    • 0037478653 scopus 로고    scopus 로고
    • Towards the delineation of the ancestral eutherian genome organization: Comparative genomic maps of human and the African elephant (Loxodonta africana) generated by chromosome painting
    • L. Froenicke Towards the delineation of the ancestral eutherian genome organization: comparative genomic maps of human and the African elephant (Loxodonta africana) generated by chromosome painting Proc. R. Soc. Lond. B. Biol. Sci. 207 2003 1331 1340
    • (2003) Proc. R. Soc. Lond. B. Biol. Sci. , vol.207 , pp. 1331-1340
    • Froenicke, L.1
  • 43
    • 0442282034 scopus 로고    scopus 로고
    • A chromosome painting test of the basal eutherian karyotype
    • M. Svartman A chromosome painting test of the basal eutherian karyotype Chromosome Res. 12 2004 45 51
    • (2004) Chromosome Res. , vol.12 , pp. 45-51
    • Svartman, M.1
  • 44
    • 0034912229 scopus 로고    scopus 로고
    • Evolution of mammalian genome organization inferred from comparative gene mapping
    • Review 0005
    • Murphy, W.J. et al. (2001) Evolution of mammalian genome organization inferred from comparative gene mapping. Genome Biol, 2, Review 0005 (http://genomebiology.com/2001/2/6/0005)
    • (2001) Genome Biol , vol.2
    • Murphy, W.J.1
  • 45
    • 0042525766 scopus 로고    scopus 로고
    • Evolution of human chromosome 1 and its homologues in placental mammals
    • W.J. Murphy Evolution of human chromosome 1 and its homologues in placental mammals Genome Res 13 2003 1880 1888
    • (2003) Genome Res , vol.13 , pp. 1880-1888
    • Murphy, W.J.1
  • 46
    • 0042178257 scopus 로고    scopus 로고
    • Reconstruction of the ancestral karyotype of eutherian mammals
    • F. Richard Reconstruction of the ancestral karyotype of eutherian mammals Chromosome Res. 11 2003 605 618
    • (2003) Chromosome Res. , vol.11 , pp. 605-618
    • Richard, F.1
  • 47
    • 1842717954 scopus 로고    scopus 로고
    • Analysis of mammalian genome rearrangements using multispecies comparative maps
    • W.J. Murphy Analysis of mammalian genome rearrangements using multispecies comparative maps Human Genomics 1 2003 30 39
    • (2003) Human Genomics , vol.1 , pp. 30-39
    • Murphy, W.J.1
  • 48
    • 0041523877 scopus 로고    scopus 로고
    • A cattle-human comparative map built with BAC-ends and human genome sequence
    • D.M. Larkin A cattle-human comparative map built with BAC-ends and human genome sequence Genome Res. 13 2003 1966 1972
    • (2003) Genome Res. , vol.13 , pp. 1966-1972
    • Larkin, D.M.1
  • 49
    • 1842768393 scopus 로고    scopus 로고
    • Reconstruction the genomic architecture of mammals: Lessons from human, mouse and rat genomes
    • G. Bourque Reconstruction the genomic architecture of mammals: lessons from human, mouse and rat genomes Genome Res. 14 2004 507 516
    • (2004) Genome Res. , vol.14 , pp. 507-516
    • Bourque, G.1
  • 50
    • 0033427515 scopus 로고    scopus 로고
    • Extensive conservation of sex chromosome organization between cat and human revealed by parallel radiation hybrid mapping
    • W.J. Murphy Extensive conservation of sex chromosome organization between cat and human revealed by parallel radiation hybrid mapping Genome Res. 9 1999 1223 1230
    • (1999) Genome Res. , vol.9 , pp. 1223-1230
    • Murphy, W.J.1
  • 51
    • 1442281458 scopus 로고    scopus 로고
    • Exceptional conservation of horse-human gene order on X chromosome revealed by high-resolution radiation hybrid mapping
    • T. Raudsepp Exceptional conservation of horse-human gene order on X chromosome revealed by high-resolution radiation hybrid mapping Proc. Natl. Acad. Sci. U. S. A. 101 2004 2386 2391
    • (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 2386-2391
    • Raudsepp, T.1
  • 52
    • 0032770572 scopus 로고    scopus 로고
    • Gene order breakpoint evidence in animal mitochondrial phylogeny
    • M. Blanchette Gene order breakpoint evidence in animal mitochondrial phylogeny J. Mol. Evol. 49 1999 193 203
    • (1999) J. Mol. Evol. , vol.49 , pp. 193-203
    • Blanchette, M.1
  • 53
    • 0033561361 scopus 로고    scopus 로고
    • Animal mitochondrial genomes
    • J. Boore Animal mitochondrial genomes Nucleic Acids Res. 27 1999 1767 1780
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1767-1780
    • Boore, J.1
  • 54
    • 0037264074 scopus 로고    scopus 로고
    • Genome rearrangements in mammalian evolution: Lessons from human and mouse genomes
    • P. Pevzner, and G. Tesler Genome rearrangements in mammalian evolution: lessons from human and mouse genomes Genome Res. 13 2003 37 45
    • (2003) Genome Res. , vol.13 , pp. 37-45
    • Pevzner, P.1    Tesler, G.2
  • 55
    • 0034518158 scopus 로고    scopus 로고
    • VISTA: Visualizing global DNA sequence alignments of arbitrary length
    • C. Mayor VISTA: visualizing global DNA sequence alignments of arbitrary length Bioinformatics 16 2000 1046 1047
    • (2000) Bioinformatics , vol.16 , pp. 1046-1047
    • Mayor, C.1
  • 56
    • 0034020416 scopus 로고    scopus 로고
    • Pip-Maker: A Web server for aligning two genomic DNA sequences
    • S. Schwartz Pip-Maker: A Web server for aligning two genomic DNA sequences Genome Res. 10 2000 577 586
    • (2000) Genome Res. , vol.10 , pp. 577-586
    • Schwartz, S.1
  • 57
    • 0036202921 scopus 로고    scopus 로고
    • PatternHunter: Faster and more sensitive homology search
    • B. Ma PatternHunter: faster and more sensitive homology search Bioinformatics 18 2002 440 445
    • (2002) Bioinformatics , vol.18 , pp. 440-445
    • Ma, B.1
  • 58
    • 0036226603 scopus 로고    scopus 로고
    • BLAT - The BLAST-like alignment tool
    • W.J. Kent BLAT - The BLAST-like alignment tool Genome Res. 12 2002 656 664
    • (2002) Genome Res. , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 59
    • 0000791476 scopus 로고
    • Lengths of chromosome segments conserved since divergence of man and mouse
    • J.H. Nadeau, and B.A. Taylor Lengths of chromosome segments conserved since divergence of man and mouse Proc. Natl. Acad. Sci. U. S. A. 81 1984 814 818
    • (1984) Proc. Natl. Acad. Sci. U. S. A. , vol.81 , pp. 814-818
    • Nadeau, J.H.1    Taylor, B.A.2
  • 60
    • 0038271921 scopus 로고    scopus 로고
    • Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution
    • P. Pevzner, and G. Tesler Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution Proc. Natl. Acad. Sci. U. S. A. 100 2003 1056 1061
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 1056-1061
    • Pevzner, P.1    Tesler, G.2
  • 61
    • 0141815478 scopus 로고    scopus 로고
    • Evolution's cauldron: Duplication, deletion, and rearrangement in the mouse and human genomes
    • W.J. Kent Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes Proc. Natl. Acad. Sci. U. S. A. 100 2003 11484 11489
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 11484-11489
    • Kent, W.J.1
  • 62
    • 0035933594 scopus 로고    scopus 로고
    • On choosing mammalian genomes for sequencing
    • S.J. O'Brien On choosing mammalian genomes for sequencing Science 292 2001 2264 2266
    • (2001) Science , vol.292 , pp. 2264-2266
    • O'Brien, S.J.1
  • 63
    • 0344153727 scopus 로고    scopus 로고
    • Genomic regulatory regions: Insights from comparative sequence analysis
    • G.M. Cooper, and A. Sidow Genomic regulatory regions: insights from comparative sequence analysis Curr. Opin. Genet. Dev. 13 2003 604 610
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 604-610
    • Cooper, G.M.1    Sidow, A.2
  • 64
    • 1842536788 scopus 로고    scopus 로고
    • Genome sequencing: Three's company
    • K. Lindblad-Toh Genome sequencing: three's company Nature 428 2004 475 476
    • (2004) Nature , vol.428 , pp. 475-476
    • Lindblad-Toh, K.1
  • 65
    • 0038781885 scopus 로고    scopus 로고
    • Quantitative estimates of sequence divergence for comparative analysis of mammalian genomes
    • G.M. Cooper Quantitative estimates of sequence divergence for comparative analysis of mammalian genomes Genome Res. 13 2003 813 820
    • (2003) Genome Res. , vol.13 , pp. 813-820
    • Cooper, G.M.1
  • 66
    • 3242669940 scopus 로고    scopus 로고
    • Cross-species chromosome painting in the golden mole and elephant shrew: Support for the mammalian clades Afrotheria and Afroinsectiphilla but not Afroinsectivora
    • T.J. Robinson Cross-species chromosome painting in the golden mole and elephant shrew: support for the mammalian clades Afrotheria and Afroinsectiphilla but not Afroinsectivora Proc. R. Soc. Lond. B. Biol. Sci. 271 2004 1477 1484
    • (2004) Proc. R. Soc. Lond. B. Biol. Sci. , vol.271 , pp. 1477-1484
    • Robinson, T.J.1
  • 67
    • 3242679138 scopus 로고    scopus 로고
    • Fiber-FISH: Fluorescence in situ hybridization on stretched DNA
    • K. Ersfeld Fiber-FISH: fluorescence in situ hybridization on stretched DNA Methods Mol. Biol. 270 2004 395 402
    • (2004) Methods Mol. Biol. , vol.270 , pp. 395-402
    • Ersfeld, K.1
  • 68
    • 0347359153 scopus 로고    scopus 로고
    • Plasticity of human chromosome 3 during primate evolution
    • E. Tsend-Ayush Plasticity of human chromosome 3 during primate evolution Genomics 83 2004 193 202
    • (2004) Genomics , vol.83 , pp. 193-202
    • Tsend-Ayush, E.1
  • 69
    • 0029185212 scopus 로고
    • Exact and approximation algorithms for the inversion distance between two permutations
    • J. Kececiogly, and D. Sankoff Exact and approximation algorithms for the inversion distance between two permutations Algorithmica 13 1995 180 210
    • (1995) Algorithmica , vol.13 , pp. 180-210
    • Kececiogly, J.1    Sankoff, D.2
  • 73
    • 0036211065 scopus 로고    scopus 로고
    • GRIMM: Genome rearrangements web server
    • G. Tesler GRIMM: Genome rearrangements web server Bioinformatics 18 2002 492 493
    • (2002) Bioinformatics , vol.18 , pp. 492-493
    • Tesler, G.1
  • 76
    • 0002163159 scopus 로고    scopus 로고
    • Breakpoint phylogenies
    • S. Miyano T., Takagi Japan Univ. Acad. Press Tokyo
    • M. Blanchette Breakpoint phylogenies S. Miyano T., Takagi Genome Informatics Workshop 1997 Japan Univ. Acad. Press Tokyo 25 34
    • (1997) Genome Informatics Workshop , pp. 25-34
    • Blanchette, M.1
  • 78
    • 0035234694 scopus 로고    scopus 로고
    • A new implementation and detailed study of breakpoint analysis
    • AAAI Press, Menlo Park, California
    • Moret, B. et al. (2001) A new implementation and detailed study of breakpoint analysis. In Pac. Symp. Biocomput. (PSB 2001) pp. 583-594, AAAI Press, Menlo Park, California
    • (2001) Pac. Symp. Biocomput. (PSB 2001) , pp. 583-594
    • Moret, B.1
  • 79
    • 0036143403 scopus 로고    scopus 로고
    • Genome-scale evolution: Reconstructing gene orders in the ancestral species
    • G. Bourque, and P.A. Pevzner Genome-scale evolution: reconstructing gene orders in the ancestral species Genome Res. 12 2002 26 36
    • (2002) Genome Res. , vol.12 , pp. 26-36
    • Bourque, G.1    Pevzner, P.A.2
  • 80
    • 0034767147 scopus 로고    scopus 로고
    • A linear-time algorithm for computing inversion distance between signed permutations with an experimental study
    • D.A. Bader A linear-time algorithm for computing inversion distance between signed permutations with an experimental study J. Comput. Biol. 8 2001 483 491
    • (2001) J. Comput. Biol. , vol.8 , pp. 483-491
    • Bader, D.A.1
  • 81
    • 2642518685 scopus 로고    scopus 로고
    • Detailed four-way comparative mapping and gene order analysis of the canine ctvm locus reveals evolutionary chromosome rearrangements
    • G. Andelfinger Detailed four-way comparative mapping and gene order analysis of the canine ctvm locus reveals evolutionary chromosome rearrangements Genomics 83 2004 1053 1062
    • (2004) Genomics , vol.83 , pp. 1053-1062
    • Andelfinger, G.1
  • 82
    • 0038658640 scopus 로고    scopus 로고
    • Efficient algorithms for multichromosomal genome rearrangements
    • G. Tesler Efficient algorithms for multichromosomal genome rearrangements J. Comp. Sys. Sci. 65 2002 587 609
    • (2002) J. Comp. Sys. Sci. , vol.65 , pp. 587-609
    • Tesler, G.1
  • 83
    • 0033085021 scopus 로고    scopus 로고
    • The virtues of gaps: Xenarthran (Edentate) monophyly supported by a unique deletion in alpha A-crystallin
    • M. van Dijk The virtues of gaps: xenarthran (Edentate) monophyly supported by a unique deletion in alpha A-crystallin Syst. Biol. 48 1999 94 106
    • (1999) Syst. Biol. , vol.48 , pp. 94-106
    • Van Dijk, M.1
  • 84
    • 0036853613 scopus 로고    scopus 로고
    • Sequence gaps join mice and men: Phylogenetic evidence from deletions in two proteins
    • C. Poux Sequence gaps join mice and men: phylogenetic evidence from deletions in two proteins Mol. Biol. Evol. 19 2002 2035 2037
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 2035-2037
    • Poux, C.1
  • 85
    • 0141721403 scopus 로고    scopus 로고
    • Indels in protein coding sequences of Euarchontoglires constrain the rooting of the eutherian tree
    • W. de Jong Indels in protein coding sequences of Euarchontoglires constrain the rooting of the eutherian tree Mol. Phylogenet. Evol. 28 2003 328 340
    • (2003) Mol. Phylogenet. Evol. , vol.28 , pp. 328-340
    • De Jong, W.1
  • 86
    • 80051690060 scopus 로고    scopus 로고
    • A molecular view on relationships among the extant orders of placental mammals
    • (Rose, K.D. and Archibald, J.D., eds), Johns Hopkins University Press (in press)
    • Springer, M.S. et al. A molecular view on relationships among the extant orders of placental mammals. In Origin, Timing, and Relationships Among the Major Clades of Extant Placental Mammals (Rose, K.D. and Archibald, J.D., eds), Johns Hopkins University Press (in press)
    • Origin, Timing, and Relationships among the Major Clades of Extant Placental Mammals
    • Springer, M.S.1


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