Molecular typing and spread of Clavibacter michiganensis subsp. michiganensis in greenhouses in Japan

Plant Pathology

Volumn 59, Issue 1, 2010, Pages 76-83

  Kawaguchi, A ^a   Tanina, K ^a   Inoue, K ^a  

^a Okayama Prefectural General Agriculture Center   (Japan)

Author keywords

Molecular typing; Morisita's index; Rep PCR; Solanum lycopersicum; Spatial pattern; Tomato bacterial canker

Indexed keywords

ALLELE; BACTERIAL DISEASE; CULTIVAR; DEFOLIATION; DISEASE TRANSMISSION; FRUIT; GREENHOUSE ECOSYSTEM; MOLECULAR ANALYSIS; POLYMERASE CHAIN REACTION; SPATIAL ANALYSIS;

CHUGOKU; HONSHU; JAPAN; OKAYAMA [CHUGOKU]; OKAYAMA [OKAYAMA (PRF)];

BACTERIA (MICROORGANISMS); CLAVIBACTER MICHIGANENSIS SUBSP. MICHIGANENSIS; LYCOPERSICON ESCULENTUM; SOLANUM;

EID: 74249118779     PISSN: 00320862     EISSN: 13653059     Source Type: Journal    
DOI: 10.1111/j.1365-3059.2009.02207.x     Document Type: Article

References (23)

1. Biggerstaff CM, Gleason ML, Braun EJ, 2000. Refinement of a nondestructive tomato seed assay for Clavibacter michiganensis subsp. michiganensis using seed fiber. Seed Science and Technology 28, 261 269.
2. Carlton WM, Gleason ML, Braun EJ, 1992. Entry of Clavibacter michiganensis subsp. michiganensis into tomato plants through pruning wounds. Phytopathology 82, 1153 (abstract).
3. Chang RJ, Ries SM, Pataky JK, 1991. Dissemination of Clavibacter michiganensis subsp. michiganensis by practices used to produce tomato plants. Phytopathology 81, 1276 1281.
4. Dice LR, 1945. Measurement of the amount of ecologic association between species. Ecology 26, 297 302.
5. Dreier J, Bermpohl A, Eichenlaub R, 1994. Southern hybridization and PCR for specific detection of phytopathogenic Clavibacter michiganensis subsp. michiganensis. Phytopathology 85, 462 468.
6. Fatmi M, Schaad NW, 2002. Survival of Clavibacter michiganensis subsp. michiganensis in infected tomato stems under natural field conditions in California, Ohio and Morocco. Plant Pathology 51, 149 154.
7. Gitaitis RD, 1991. Bacterial canker. In : Jones JB, Jones JP, Stall RE, Zitter TA, eds. Compendium of Tomato Diseases. St Paul, MN, USA : APS Press, 25 6.
8. Gleason ML, Braun EJ, Catiton WM, Peterson RH, 1991. Survival and dissemination of Clavibacter michiganensis subsp. michiganensis in tomato. Phytopathology 81, 1519 1523.
9. Gleason ML, Gitaitis RD, Ricker MD, 1993. Recent progress in understanding and controlling bacterial canker of tomato in Eastern North America. Plant Disease 77, 1069 1076.
10. Grogan RG, Kimble KA, 1967. The role of seed contamination in the transmission of Pseudomonas phaseolicola in Phaseolus vulgaris. Phytopathology 57, 28 31.
11. Hulton CS, Higgins CF, Sharp PM, 1991. ERIC sequences: a novel family of repetitive elements in the genomes of Escherichia coli, Salmonella typhimurium and other enterobacteria. Molecular Microbiology 5, 825 834.
12. Jahr H, Bahro R, Bruger A, Ahlemeyer J, Eichenlaub R, 1999. Interactions between Clavibacter michiganensis and its host plants. Environmental Microbiology 1, 113 118.
13. Kawaguchi A, Inoue K, Nasu H, 2005. Inhibition of crown gall formation by Agrobacterium radiobacter biovar 3 strains isolated from grapevine. Journal of General Plant Pathology 71, 422 430.
14. Kawaguchi A, Inoue K, Nasu H, 2007. Biological control of grapevine crown gall by nonpathogenic Agrobacterium vitis strain VAR03-1. Journal of General Plant Pathology 73, 133 138.
15. Kleitman F, Barash I, Burger A et al., 2008. Characterization of a Clavibacter michiganensis subsp. michiganensis population in Israel. European Journal of Plant Pathology 121, 463 475.
16. Louws FJ, Bell J, Medina-More CM et al., 1998. rep-PCR-mediated genomic fingerprinting: a rapid and effective method to identity Clavibacter michiganensis. Phytopathology 88, 862 868.
17. Morisita M, 1959. Measuring of the dispersion of individuals and analysis of the distributional pattern. Memoirs of the Faculty of Sciences, Kyushu University, Series E (Biology) 2, 215 234.
18. Δ-index, a measure of dispersion on individuals. Researches on Population Ecology 4, 1 7.
19. Narita T, Baba T, 1959. First occurrence of tomato bacterial canker in Hokkaido, Japan. Annual Report of the Society of Plant Protection of North Japan 10, 87 8 (in Japanese).
20. Shirakawa T, Sasaki T, 1988. A selective medium for isolation of Corynebacterium michiganense pv. michiganense, the pathogen of tomato bacterial canker disease. Annals of Phytopathological Society of Japan 54, 540 543.
21. Sneath PHA, Sokal RR, 1973. Numerical Taxonomy. San Francisco, CA, USA : WH Freeman and Co.
22. Tashiro N, 2002. Changes and problems of control systems of plant diseases and pests on fruit trees in Saga Prefecture, Japan. In : Discussion of Control Systems of Plant Diseases and Pests Symposium, 2002. Tokyo, Japan : Japan Plant Protection Association, 70 9 (in Japanese).
23. Yap I, Nelson RJ, 1996. Winboot: A Program for Performing Bootstrap Analysis of Binary Data to Determine the Confidence Limits of UPGMA-Based Dendrograms. Manila, Philippines : International Rice Research Institute: IRRI Discussion Paper Series no. 14.