-
1
-
-
3042782585
-
Codon bias and heterologous protein expression
-
C. Gustafsson, S. Govindarajan, and J. Minshull, "Codon bias and heterologous protein expression," Trends Biotechnol, vol. 22, pp. 346-353, 2004.
-
(2004)
Trends Biotechnol
, vol.22
, pp. 346-353
-
-
Gustafsson, C.1
Govindarajan, S.2
Minshull, J.3
-
2
-
-
0027153966
-
Codon usage bias and base composition of nuclear genes in Drosophila
-
E.N. Moriyama, and D. L. Hartl, "Codon usage bias and base composition of nuclear genes in Drosophila," Genetics, vol. 134, pp. 847-858, 1993.
-
(1993)
Genetics
, vol.134
, pp. 847-858
-
-
Moriyama, E.N.1
Hartl, D.L.2
-
3
-
-
10644255526
-
Advanced genetic strategies for recombinant protein expression in Escherichia coli
-
H.P. Sørensen, and K.K. Mortensen, "Advanced genetic strategies for recombinant protein expression in Escherichia coli," J Biotechnoa, vol, 115, pp. 113-128, 2005.
-
(2005)
J Biotechnoa
, vol.115
, pp. 113-128
-
-
Sørensen, H.P.1
Mortensen, K.K.2
-
4
-
-
38549102642
-
-
M. Heitzer, A. Eckert, M. Fuhrmann, and C. Griesbeck, Influence of codon bias on the expression of foreign genes in microalgae, Advance in Experimental Medicine and Biology, 616, pp.616:46-53, 2007.
-
M. Heitzer, A. Eckert, M. Fuhrmann, and C. Griesbeck, "Influence of codon bias on the expression of foreign genes in microalgae," Advance in Experimental Medicine and Biology, vol. 616, pp.616:46-53, 2007.
-
-
-
-
5
-
-
33845626632
-
Translation efficiencies of synonymous codons are not always correlated with codon usage in tobacco chloroplasts
-
M. Nakamura, and M. Sugiura, "Translation efficiencies of synonymous codons are not always correlated with codon usage in tobacco chloroplasts," The Plant Journal, vol. 49, pp. 128-134, 2007.
-
(2007)
The Plant Journal
, vol.49
, pp. 128-134
-
-
Nakamura, M.1
Sugiura, M.2
-
6
-
-
0029931535
-
Synonymous codon bias is related to gene length in Escherichia coli: Selection for translational accuracy?,
-
A. Eyre-Walker, "Synonymous codon bias is related to gene length in Escherichia coli: selection for translational accuracy?,", Mol Biol Evol, vol. 13, pp. 864-872, 1996.
-
(1996)
Mol Biol Evol
, vol.13
, pp. 864-872
-
-
Eyre-Walker, A.1
-
7
-
-
0036786891
-
Correlations between shine-dalgarno sequences and gene features such as predicted expression levels and operon structures
-
J. Ma, A. Campbell, and S. Karlin, "Correlations between shine-dalgarno sequences and gene features such as predicted expression levels and operon structures," J Bacteriol, vol. 184, pp. 5733-5745, 2002.
-
(2002)
J Bacteriol
, vol.184
, pp. 5733-5745
-
-
Ma, J.1
Campbell, A.2
Karlin, S.3
-
8
-
-
0033053160
-
Two aspects of DNA base composition: G+C content and translation-coupled deviation from intra-strand rule of A = T and G = C
-
S. Noboru, "Two aspects of DNA base composition: G+C content and translation-coupled deviation from intra-strand rule of A = T and G = C," J Mol Evol, vol. 49, pp. 49-62, 1999.
-
(1999)
J Mol Evol
, vol.49
, pp. 49-62
-
-
Noboru, S.1
-
9
-
-
33751581371
-
Codon usage and selection on proteins
-
J.B. Plotkin, J. Dushoff, M.M. Desai, and H.B. Fraser, "Codon usage and selection on proteins," J Mol Evol, vol. 63, pp. 635-653, 2006.
-
(2006)
J Mol Evol
, vol.63
, pp. 635-653
-
-
Plotkin, J.B.1
Dushoff, J.2
Desai, M.M.3
Fraser, H.B.4
-
10
-
-
0032882170
-
Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: Gene expression level and speciesspecific diversity of codon usage based on multivariate analysis
-
S. Kanaya, Y. Yamada, Y. Kudo, and T. Ikemura, "Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and speciesspecific diversity of codon usage based on multivariate analysis," Gene, vol. 238, pp. 143-155, 1999.
-
(1999)
Gene
, vol.238
, pp. 143-155
-
-
Kanaya, S.1
Yamada, Y.2
Kudo, Y.3
Ikemura, T.4
-
11
-
-
34250636733
-
Purification of human β2-adrenergic receptor expressed in methylotrophic yeast Pichia pastoris
-
S. Noguchi, and Y. Satow, "Purification of human β2-adrenergic receptor expressed in methylotrophic yeast Pichia pastoris," J Biochem, vol. 140, pp. 799-804, 2006.
-
(2006)
J Biochem
, vol.140
, pp. 799-804
-
-
Noguchi, S.1
Satow, Y.2
-
12
-
-
24944467406
-
Synonymous codon usage bias in 16 Staphylococcus aureus phages: Implication in phage therapy
-
K. Sau, S.K. Gupta, S. Sau, and T.C. Ghosh, "Synonymous codon usage bias in 16 Staphylococcus aureus phages: implication in phage therapy," Virus Res, vol. 113, pp. 123-231, 2005.
-
(2005)
Virus Res
, vol.113
, pp. 123-231
-
-
Sau, K.1
Gupta, S.K.2
Sau, S.3
Ghosh, T.C.4
-
13
-
-
0034736510
-
DNA G+C content of the third codon position and codon usage biases of human genes
-
N. Sueoka, and Y. Kawanishi, "DNA G+C content of the third codon position and codon usage biases of human genes," Gene, vol. 261, pp. 53-62, 2000.
-
(2000)
Gene
, vol.261
, pp. 53-62
-
-
Sueoka, N.1
Kawanishi, Y.2
-
14
-
-
13444269018
-
Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes
-
X.F. Wan, D. Xu, A. Kleinhofs, and J.Z. Zhou, "Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes," BMC Evolutionary Biology, vol. 4, pp.19, 2004.
-
(2004)
BMC Evolutionary Biology
, vol.4
, pp. 19
-
-
Wan, X.F.1
Xu, D.2
Kleinhofs, A.3
Zhou, J.Z.4
-
15
-
-
33745880427
-
Factors influencing synonymous codon and amino acid usage biases in Mimivirus
-
K. Sau, S.K. Gupta , S. Sau, S.C. Mandal, and T.C. Ghosh, "Factors influencing synonymous codon and amino acid usage biases in Mimivirus," Biosystems, vol. 85, pp. 107-113, 2006.
-
(2006)
Biosystems
, vol.85
, pp. 107-113
-
-
Sau, K.1
Gupta, S.K.2
Sau, S.3
Mandal, S.C.4
Ghosh, T.C.5
-
16
-
-
13844266895
-
Composition bias and genome polarity of RNA viruses
-
P. Auewarakul, "Composition bias and genome polarity of RNA viruses," Virus Res, vol. 109, pp. 33-37, 2005.
-
(2005)
Virus Res
, vol.109
, pp. 33-37
-
-
Auewarakul, P.1
-
17
-
-
33745654553
-
Evolutionary basis of codon usage and nucleotide composition bias in vertebrate DNA viruses
-
L.A. Shackelton, C.R. Parrish, and E.C. Holmes, "Evolutionary basis of codon usage and nucleotide composition bias in vertebrate DNA viruses," J Mol Evol, vol. 62, pp. 551-563. 2006.
-
(2006)
J Mol Evol
, vol.62
, pp. 551-563
-
-
Shackelton, L.A.1
Parrish, C.R.2
Holmes, E.C.3
-
18
-
-
0027054450
-
Diagrammatization of codon usage in 339 human immunodeficiency virus proteins and its biological implication
-
K.C. Chou, and C.T. Zhang, "Diagrammatization of codon usage in 339 human immunodeficiency virus proteins and its biological implication," AIDS Research Human Retroviruses, vol. 8, pp. 1967-1976, 1992.
-
(1992)
AIDS Research Human Retroviruses
, vol.8
, pp. 1967-1976
-
-
Chou, K.C.1
Zhang, C.T.2
-
19
-
-
0033828846
-
Codon usage in nucleopolyhedroviruses
-
D.B. Levin, and B. Whittome, "Codon usage in nucleopolyhedroviruses, " J Gen Virol, vol. 81, pp. 2313-2325, 2000.
-
(2000)
J Gen Virol
, vol.81
, pp. 2313-2325
-
-
Levin, D.B.1
Whittome, B.2
-
20
-
-
0345188623
-
Papillomavirus Capsid Protein Expression Level Depends on the Match between Codon Usage and tRNA Availability
-
J. Zhou, W.J. Liu, S.W. Peng, X.Y. Sun, and I. Frazer, "Papillomavirus Capsid Protein Expression Level Depends on the Match between Codon Usage and tRNA Availability," J Virol, vol.73, pp. 4972-4982, 1999.
-
(1999)
J Virol
, vol.73
, pp. 4972-4982
-
-
Zhou, J.1
Liu, W.J.2
Peng, S.W.3
Sun, X.Y.4
Frazer, I.5
-
21
-
-
0025074342
-
Contrasts in codon usage of latent versus productive genes of Epstein-Barr virus: Data and hypotheses
-
S. Karlin, B.E. Blaisdell, and G.A. Schachtel, "Contrasts in codon usage of latent versus productive genes of Epstein-Barr virus: data and hypotheses," J Virol, vol.64, pp. 4264-4273, 1990.
-
(1990)
J Virol
, vol.64
, pp. 4264-4273
-
-
Karlin, S.1
Blaisdell, B.E.2
Schachtel, G.A.3
-
22
-
-
0028985089
-
-
S. Hassard, and G. Ward, Efficient creation of sequencing libraries from blunt-ended restriction enzyme fragments, Biotechniques, 18, pp. 396-398. 400, 1995.
-
S. Hassard, and G. Ward, "Efficient creation of sequencing libraries from blunt-ended restriction enzyme fragments," Biotechniques, vol. 18, pp. 396-398. 400, 1995.
-
-
-
-
23
-
-
0037372775
-
The extent of codon usage bias in human RNA viruses and its evolutionary origin
-
G.M. Jenkins, and E.C. Holmes, "The extent of codon usage bias in human RNA viruses and its evolutionary origin," Virus Res, vol.92, pp.1-7 , 2003.
-
(2003)
Virus Res
, vol.92
, pp. 1-7
-
-
Jenkins, G.M.1
Holmes, E.C.2
-
24
-
-
10344254078
-
Duck plague
-
11th ed. Ames: Iowa State Press
-
Sandhu T.S., and L. Leibovitz, Duck plague. In: Diseases of poultry, 11th ed. Ames: Iowa State Press, 2003, p. 354-363.
-
(2003)
Diseases of poultry
, pp. 354-363
-
-
Sandhu, T.S.1
Leibovitz, L.2
-
25
-
-
33750926314
-
Construction of duck enteritis virus gene libraries and discovery, cloning and identification of viral nucleocapsid protein gene
-
in Chinese
-
A.C. Cheng, M.S. Wang, and M. Wen, "Construction of duck enteritis virus gene libraries and discovery, cloning and identification of viral nucleocapsid protein gene", High Technolagy Letters, vol. 16, pp. 948-953, 2006. (in Chinese).
-
(2006)
High Technolagy Letters
, vol.16
, pp. 948-953
-
-
Cheng, A.C.1
Wang, M.S.2
Wen, M.3
-
26
-
-
0028256487
-
Assembly of herpes simplex virus type 1 capsids using a panel of recombinant baculoviruses
-
J.D. Tatman, V.G. Preston, P. Nicholson, R.M. Elliott and F.J. Rixon, "Assembly of herpes simplex virus type 1 capsids using a panel of recombinant baculoviruses," J Gen Virol, vol. 75, pp. 1101-1113, 1994.
-
(1994)
J Gen Virol
, vol.75
, pp. 1101-1113
-
-
Tatman, J.D.1
Preston, V.G.2
Nicholson, P.3
Elliott, R.M.4
Rixon, F.J.5
-
27
-
-
1842843642
-
Assembly of Marek's disease virus (MDV) capsids using recombinant baculoviruses expressing MDV capsid proteins
-
E. Kut, and D. Rasschaert, "Assembly of Marek's disease virus (MDV) capsids using recombinant baculoviruses expressing MDV capsid proteins," J Gen Viroly, vol. 85, pp. 769-774, 2004.
-
(2004)
J Gen Viroly
, vol.85
, pp. 769-774
-
-
Kut, E.1
Rasschaert, D.2
-
28
-
-
0026003618
-
The promoter, transcriptional unit, and coding sequence of herpes simplex virus 1 family 35 proteins are contained within and in frame with the UL26 open reading frame
-
F.Y. Liu, and B. Roizman, "The promoter, transcriptional unit, and coding sequence of herpes simplex virus 1 family 35 proteins are contained within and in frame with the UL26 open reading frame," J Virol, vol.65, pp. 206-212, 1991.
-
(1991)
J Virol
, vol.65
, pp. 206-212
-
-
Liu, F.Y.1
Roizman, B.2
-
29
-
-
0025771408
-
Cytomegalovirus assembly protein nested gene family: Four 3′-coterminal transcripts encode four in-frame, overlapping proteins
-
A.R. Welch, L.M. Mcnally, and W. Gibson, "Cytomegalovirus assembly protein nested gene family: four 3′-coterminal transcripts encode four in-frame, overlapping proteins," J Virol, vol.65, pp. 4091-4100, 1991.
-
(1991)
J Virol
, vol.65
, pp. 4091-4100
-
-
Welch, A.R.1
Mcnally, L.M.2
Gibson, W.3
-
30
-
-
0028129956
-
Phenotype of the Herpes Simplex Virus Type 1 Protease Substrate ICP35 Mutant Virus
-
L. Matusick-Kumar, W. Hurlburt, S.P. Weinheimer, W.W. Newcomb, J.C. Brown and M. Gao, "Phenotype of the Herpes Simplex Virus Type 1 Protease Substrate ICP35 Mutant Virus," J Virol, vol. 68, pp. 5384-5394, 1994.
-
(1994)
J Virol
, vol.68
, pp. 5384-5394
-
-
Matusick-Kumar, L.1
Hurlburt, W.2
Weinheimer, S.P.3
Newcomb, W.W.4
Brown, J.C.5
Gao, M.6
-
31
-
-
0022856787
-
An evolutionary perspective on synonymous codon usage in unicellular organisms
-
P.M. Sharp, and W.H. Li, "An evolutionary perspective on synonymous codon usage in unicellular organisms," J Mol Evol, vol. 24, pp.28-38, 1986.
-
(1986)
J Mol Evol
, vol.24
, pp. 28-38
-
-
Sharp, P.M.1
Li, W.H.2
-
32
-
-
0025318864
-
The 'effective number of codons' used in a gene
-
F. Wright, "The 'effective number of codons' used in a gene," Gene, vol. 87, pp. 23-29, 1990.
-
(1990)
Gene
, vol.87
, pp. 23-29
-
-
Wright, F.1
-
33
-
-
0842330869
-
Codon usage bias amongst plant viruses
-
M.J. Adams, and J.E. Antoniw, "Codon usage bias amongst plant viruses," Arch of Virol, vol. 149, pp. 113-135, 2003.
-
(2003)
Arch of Virol
, vol.149
, pp. 113-135
-
-
Adams, M.J.1
Antoniw, J.E.2
-
34
-
-
33846945011
-
Compositional bias and size of genomes of human DNA viruses
-
J. Sewatanon, S. Srichatrapimuk, and P. Auewarakul, "Compositional bias and size of genomes of human DNA viruses," Intervirology, vol. 50, pp. 123-132, 2007.
-
(2007)
Intervirology
, vol.50
, pp. 123-132
-
-
Sewatanon, J.1
Srichatrapimuk, S.2
Auewarakul, P.3
-
35
-
-
18644375803
-
Analysis of synonymous codon usage bias in Chlamydia
-
H. Lu, W.M. Zhao, Y. Zheng, H. Wang, M. Qi, and X.P.Yu, "Analysis of synonymous codon usage bias in Chlamydia". Acta Bioch Bioph Sin, vol. 37, pp. 1-10, 2005.
-
(2005)
Acta Bioch Bioph Sin
, vol.37
, pp. 1-10
-
-
Lu, H.1
Zhao, W.M.2
Zheng, Y.3
Wang, H.4
Qi, M.5
Yu, X.P.6
-
36
-
-
34548502467
-
Molecular characterization of the herpes simplex virus 1 (HSV-1) homologues, UL25 to UL30, in duck enteritis virus (DEV)
-
S.W. Liu, S.H. Chen, H.X. Li, and X.G. Kong, "Molecular characterization of the herpes simplex virus 1 (HSV-1) homologues, UL25 to UL30, in duck enteritis virus (DEV)", Gene, vol. 401, pp. 88-96, 2007.
-
(2007)
Gene
, vol.401
, pp. 88-96
-
-
Liu, S.W.1
Chen, S.H.2
Li, H.X.3
Kong, X.G.4
-
37
-
-
58149460953
-
Analysis of synonymous codon usage in the UL24 gene of duck enteritis virus
-
Jia R, Cheng A, Wang M, Xin H, Guo Y, Zhu D, et al. "Analysis of synonymous codon usage in the UL24 gene of duck enteritis virus," Virus Genes, vol. 38, pp. 96-103 , 2009.
-
(2009)
Virus Genes
, vol.38
, pp. 96-103
-
-
Jia, R.1
Cheng, A.2
Wang, M.3
Xin, H.4
Guo, Y.5
Zhu, D.6
-
38
-
-
52249100781
-
Characterization of codon usage bias in the dUTPase gene of duck enteritis virus
-
Zhao LC, Cheng AC, Wang MS, Yuan GP, and Cai MS. "Characterization of codon usage bias in the dUTPase gene of duck enteritis virus," Prog Nat Sci, vol. 18, pp. 1069-1076, 2008.
-
(2008)
Prog Nat Sci
, vol.18
, pp. 1069-1076
-
-
Zhao, L.C.1
Cheng, A.C.2
Wang, M.S.3
Yuan, G.P.4
Cai, M.S.5
-
39
-
-
0346991745
-
Protein evolution and codon usage bias on the neosex chromosomes of Drosophila Miranda
-
D. Bachtrog, "Protein evolution and codon usage bias on the neosex chromosomes of Drosophila Miranda," Genetics, vol. 165, pp. 1221-1232, 2003.
-
(2003)
Genetics
, vol.165
, pp. 1221-1232
-
-
Bachtrog, D.1
-
40
-
-
0030861159
-
Evolution of codon usage bias in Drosophila
-
J.R. Powell, and E.N. Moriyama, "Evolution of codon usage bias in Drosophila," P Natlacad Sci USA, vol. 94, pp. 7784-7790, 1997.
-
(1997)
P Natlacad Sci USA
, vol.94
, pp. 7784-7790
-
-
Powell, J.R.1
Moriyama, E.N.2
|