Evolution of a parallel Performance System

Proceedings of the 2nd International Workshop on Parallel Tools for High Performance Computing

Volumn , Issue , 2008, Pages 169-190

  Malony, Allen D ^a   Shende, Sameer ^a   Morris, Alan ^a   Biersdorff, Scott ^a   Spear, Wyatt ^a   Huck, Kevin ^a   Nataraj, Aroon ^a  

^a UNIVERSITY OF OREGON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BEST PRACTICES; HIGH-PERFORMANCE COMPUTING; PARALLEL PERFORMANCE; PARALLEL PROGRAM; PERFORMANCE SYSTEM; RESEARCH AND DEVELOPMENT;

PARALLEL ARCHITECTURES;

TOOLS;

EID: 74049117224     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1007/978-3-540-68564-7     Document Type: Conference Paper

References (49)

1. Ahn, D., Kufrin, R., Raghuraman, A., Seo, J.: Perfsuite. http://perfsuite.ncsa.uiuc.edu/.
2. Bell, R., Malony, A., Shende, S.: A portable, extensible, and scalable tool for parallel performance profile analysis. In: Proc. EUROPAR 2003 Conference (EUROPAR03) (2003). URL http://www.cs.uoregon.edu/research/paracomp/ papers/parco03/parco03.pdf.
3. Bernholdt, D.E., Allan, B.A., Armstrong, R., Bertrand, F., Chiu, K., Dahlgren, T.L., Damevski, K., Elwasif, W.R., Epperly, T.G.W., Govindaraju, M., Katz, D.S., Kohl, J.A., Krishnan, M., Kumfert, G., Larson, J.W., Lefantzi, S., Lewis, M.J., Malony, A.D., McInnes, L., Nieplocha, J., Norris, B., Parker, S.G., Ray, J., Shende, S., Windus, T.L., Zhou, S.: A Component Architecture for High-Performance Scientific Computing. Intl. Journal of High-Performance Computing Applications ACTS Collection Special Issue (2005).
4. Berrendorf, R., Ziegler, H., Mohr, B.: PCL - The Performance Counter Library. http://www.fz-juelich.de/zam/PCL/.
5. Browne, S., Dongarra, J., Garner, N., Ho, G., Mucci, P.: A Portable Programming Interface for Performance Evaluation on Modern Processors. International Journal of High Performance Computing Applications 14(3), 189-204 (2000).
6. Brunst, H., Malony, A.D., Shende, S., Bell, R.: Online Remote Trace Analysis of Parallel Applications on High-Performance Clusters. In: Proceedings of the ISHPC Conference (LNCS 2858), pp. 440-449. Springer (2003).
7. Brunst, H., Nagel, W.E., Malony, A.D.: A Distributed Performance Analysis Architecture for Clusters. In: Proceedings of the IEEE International Conference on Cluster Computing (Cluster 2003), pp. 73-83. IEEE Computer Society (2003).
8. Buck, B., Hollingsworth, J.: An API for Runtime Code Patching. Journal of High Performance Computing Applications 14(4), 317-329 (2000).
9. CCA Forum: The Common Component Architecture Forum. http://www.cca-forum. org.
10. DeRose, L.: The Hardware Performance Monitor Toolkit. In: Proceedings of the European Conference on Parallel Computing (EuroPar 2001, LNCS 2150), pp. 122-131. Springer (2001).
11. Dongarra, J., Malony, A.D., Moore, S., Mucci, P., Shende, S.: Performance Instrumentation and Measurement for Terascale Systems. In: Proceedings of the ICCS 2003 Conference (LNCS 2660), pp. 53-62 (2003).
12. Eaton, J.W.: Octave home page. URL http://www.octave.org/Http://www. octave.org/.
13. Forum, M.P.I.: MPI: A Message Passing Interface Standard. International Journal of Supercomputer Applications (Special Issue on MPI) 8(3/4) (1994).
14. Foundation, T.A.S.: Apache derby. URL http://db.apache.org/derby/Http:// db.apache.org/derby/.
15. Graham, S., Kessler, P., McKusick, M.: gprof: A Call Graph Execution Profiler. SIGPLAN '82 Symposium on Compiler Construction pp. 120-126 (1982).
16. Huck, K., Malony, A.: PerfExplorer: A performance data mining framework for large-scale parallel computing. In: Conference on High Performance Networking and Computing (SC'05) (2005).
17. Huck, K., Malony, A., Bell, R., Morris, A.: Design and Implementation of a Parallel Performance DataManagement Framework. In: Proc. International Conference on Parallel Processing, ICPP-05 (2005).
18. IBM: IBM DB2 Information Management Software. http://www.ibm.com/ software/data.
19. Knüpfer, A., Brendel, R., Brunst, H., Mix, H., Nagel, W.E.: Introducing the Open Trace Format (OTF). In: Proceedings of the 6th International Conference on Computational Science, Springer Lecture Notes in Computer Science, vol. 3992, pp. 526-533. Reading, UK (2006).
20. Kohn, S., Kumfert, G., Painter, J., Ribbens, C.: Divorcing Language Dependencies from a Scientific Software Library. In: Proceedings of the 10th SIAM Conference on Parallel Processing (2001).
21. Lindlan, K.A., Cuny, J., Malony, A.D., Shende, S., Mohr, B., Rivenburgh, R., Rasmussen, C.: A Tool Framework for Static and Dynamic Analysis of Object-Oriented Software with Templates. In: Proceedings of SC2000: High Performance Networking and Computing Conference (2000).
22. Malony, A., Shende, S.: Distributed and Parallel Systems: From Concepts to Applications, chap. Performance Technology for Complex Parallel and Distributed Systems, pp. 37-46. Kluwer, Norwell, MA (2000).
23. Malony, A.D.: Performance Observability. Ph.D. thesis, University of Illinois at Urbana- Champaign (1990).
24. Mohr, B., Malony, A.D., Shende, S., Wolf, F.: Towards a Performance Tool Interface for OpenMP: An Approach Based on Directive Rewriting. In: Proceedings of Third European Workshop on OpenMP (2001).
25. Mohr, B., Wolf, F.: KOJAK - A Tool Set for Automatic Performance Analysis of Parallel Applications. In: Proceedings of the European Conference on Parallel Computing (EuroPar 2003, LNCS 2790), pp. 1301-1304. Springer (2003).
26. Mucci, P.: Dynaprof. http://www.cs.utk.edu/∼mucci/dynaprof.
27. MySQL: MySQL: The World's Most Popular Open Source Database.
28. Nagel, W., Arnold, A., Weber, M., Hoppe, H.C., Solchenbach, K.: VAMPIR: Visualization and Analysis of MPI Resources. Supercomputer 12(1), 69-80 (1996).
29. Nataraj, A., Malony, A.D., Shende, S., Morris, A.: Integrated parallel performance views. Cluster Computing 11(1), 57-73 (2008). http://dx.doi.org/10. 1007/s10586-007-0051-6.
30. Nataraj, A., Morris, A., Malony, A.D., Arnold, D., Miller, B.: A Framework for Scalable, Parallel Performance Monitoring using TAU and MRNet. Under submission.
31. Nataraj, A., Morris, A., Malony, A.D., Sottile, M., Beckman, P.: The Ghost in the Machine: Observing the Effects of Kernel Operation on Parallel Application Performance. In: ACM/IEEE SC2007. Reno, Nevada (2007).
32. Nataraj, A., Sottile, M., Morris, A., Malony, A.D., Shende, S.: TAUoverSupermon : Low- Overhead Online Parallel Performance Monitoring. In: Europar'07: European Conference on Parallel Processing (2007).
33. Norris, B., Ray, J., McInnes, L., Bernholdt, D., Elwasif, W., Malony, A., Shende, S.: Computational quality of service for scientific components. In: Proceedings of the International Symposium on Component-based Software Engineering (CBSE7). Springer (2004).
34. Oracle Corporation: Oracle. http://www.oracle.com.
35. PostgreSQL: PostgreSQL: The World's Most Advanced Open Source Database. http://www.postgresql.org.
36. Seidl, S.: VTF3 - A Fast Vampir Trace File Low-Level Management Library. Tech. Rep. ZHR-R-0304, Dresden University of Technology, Center for High-Performance Computing (2003).
37. Shende, S.: The Role of Instrumentation and Mapping in Performance Measurement. Ph.D. thesis, University of Oregon (2001).
38. Shende, S., Malony, A.D.: The TAU parallel performance system. The International Journal of High Performance Computing Applications 20(2), 287-331 (2006). URL http://www.cs.uoregon.edu/research/tau.
39. Shende, S., Malony, A.D., Cuny, J., Lindlan, K., Beckman, P., Karmesin, S.: Portable Profiling and Tracing for Parallel Scientific Applications using C++. In: Proceedings of the SIGMETRICS Symposium on Parallel and Distributed Tools, SPDT'98, pp. 134-145 (1998).
40. Shende, S., Malony, A.D., Rasmussen, C., Sottile, M.: A Performance Interface for Component-Based Applications. In: Proceedings of International Workshop on Performance Modeling, Evaluation and Optimization, International Parallel and Distributed Processing Symposium (2003).
41. Subramanya, R., Reddy, R.: Sandia DNS code for 3D compressible flows - Final Report. Tech. Rep. PSC-Sandia-FR-3.0, Pittsburgh Supercomputing Center, PA (2000).
42. Szyperski, C.: Component Software: Beyond Object-Oriented Programming. Addison-Wesley (1997).
43. The R Foundation for Statistical Computing: R project for statistical computing (2007). URL http://www.r-project.org. Http://www.r-project.org.
44. University of Oregon: TAU Portable Profiling. http://tau.uoregon.edu.
45. University of Oregon: TAU Portal. http://tau.nic.uoregon.edu.
46. University of Oregon: Tuning and Analysis Utilities User's Guide. http://www.cs.uoregon.edu/research/paracomp/tau.
47. Vetter, J., Chambreau, C.: mpiP: Lightweight, Scalable MPI Profiling. http://www.llnl.gov/CASC/mpip/.
48. Witten, Frank, E.: Data Mining: Practical Machine Learning Tools and Techniques. Morgan Kaufmann (2005). URL http://www.cs.waikato.ac.nz/̃ml/ weka/.
49. Wolf, F., Mohr, B., Dongarra, J., Moore, S.: Efficient Pattern Search in Large Traces through Successive Refinement. In: Proceedings of the European Conference on Parallel Computing (EuroPar 2004, LNCS 3149), pp. 47-54. Springer (2004).