Phenotype spaces

Journal of Mathematical Biology

Volumn 60, Issue 2, 2010, Pages 247-266

  Mynard, Frédéric ^a   Seal, Gavin J ^a  

^a GEORGIA SOUTHERN UNIVERSITY   (United States)

Author keywords

Genotype; Phenotype; Pretopology; RNA folding; Topology

Indexed keywords

RNA;

ARTICLE; BIOLOGICAL MODEL; EVOLUTION; GENETICS; GENOTYPE; HUMAN; PHENOTYPE; POPULATION DYNAMICS; POPULATION GENETICS; PROBABILITY; STATISTICAL MODEL;

EVOLUTION; GENETICS, POPULATION; GENOTYPE; HUMANS; MODELS, BIOLOGICAL; MODELS, GENETIC; MODELS, STATISTICAL; PHENOTYPE; POPULATION DYNAMICS; PROBABILITY; RNA;

EID: 74049084412     PISSN: 03036812     EISSN: 14321416     Source Type: Journal    
DOI: 10.1007/s00285-009-0265-8     Document Type: Article

References (16)

1. Adámek J, Herrlich H, Strecker E (1990) Abstract and concrete categories. Wiley, London.
2. Brock P, Kent DC (1997) Approach spaces, limit tower spaces, and probabilistic convergence spaces. Appl Categorical Struct 5(2): 99-110.
3. Dolecki S (2009) An initiation into convergence theory. Beyond Topology, AMS Contemp Math 486.
4. Fontana W, Schuster P (1998) Shaping space: the possible and the attainable in RNA genotype-phenotype mapping. J Theor Biol 194: 491-515.
5. Grinstead CM, Snell JL (1997) Introduction to probability. American Mathematical Society, Providence.
6. Kemeny JG, Snell JL (1960) Finite Markov chains. van Nostrand, Princeton.
7. Lowen E, Lowen R (1989) Topological quasitopos hulls of categories containing topological and metric objects. Cahiers de Topologies et Géometrie différentielle Catégorique 30: 213-228.
8. Lowen E, Lowen R, Verbeeck C (1997) Exponential objects in PRAP. Cahiers de Topologies et Géometrie différentielle Catégorique 38: 259-276.
9. Lowen R (1997) Approach spaces: the missing link in topology-uniformity-metric triad. Oxford University Press, New York.
10. Mynard F (2008) Measures of compactness for filters in the approach setting. Quaest Math 31: 189-201.
11. Richardson GD, Kent DC (1996) Probabilistic convergence spaces. J Aust Math Soc (Ser A) 61: 400-420.
12. Stadler B, Stadler P (2004) The topology of evolutionary biology. In: Ciobanu G, Rozenberg G (eds) Modeling in molecular biology. Springer, Heidelberg, pp 267-286.
13. Stadler B, Stadler P, Wagner G, Fontana W (2001) The topology of the possible: formal spaces underlying patterns of evolutionary change. J Theor Biol 213: 241-274.
14. Stadler P (2002) Spectral landscape theory. In: Crutchfield JP, Schuster P (eds) Evolutionary dynamics. Exploring the Interplay of selection, neutrality, accident and function. Oxford University Press, New York, pp 231-272.
15. Stadler P, Stadler B (2006) Genotype phenotype maps. Biol Theory 3: 268-279.
16. Wagner GP, Stadler PF (2003) Quasi-independence, homology and the unity of type: a topological theory of characters. J Theor Biol 220(4): 505-527.