Genomics of helper component proteinase reveals effective strategy for papaya ringspot virus resistance

Molecular Biotechnology

Volumn 44, Issue 1, 2010, Pages 22-29

  Mangrauthia, Satendra K ^a   Singh, Priyanka ^b   Praveen, Shelly ^b  

^a DIRECTORATE OF RICE RESEARCH   (India)

^b INDIAN AGRICULTURAL RESEARCH INSTITUTE   (India)

Author keywords

Electrophoretic mobility shift assay; HcPro; MiRNA; Potyvirus; Silencing suppressor

Indexed keywords

DEVELOPMENTAL BIOLOGY; DOSE-DEPENDENT MANNER; ECONOMIC LOSS; ELECTROPHORETIC MOBILITY SHIFT ASSAY; GENOMICS; PAPAYA RINGSPOT VIRUS; POTYVIRUSES; REGULATORY PATHWAY; RNA BINDING; RNA SILENCING; TRANSGENIC PLANTS;

ELECTROPHORETIC MOBILITY; PLANTS (BOTANY); PROTEINS; RNA; TROPICS;

VIRUSES;

MICRORNA; PROTEINASE;

ARTICLE; GENE EXPRESSION; GENE SILENCING; GENOMICS; HCPRO GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PAPAYA VIRUS; PLANT DEVELOPMENT; PLANT VIRUS; RNA ISOLATION; SUPPRESSOR GENE; TRANSGENIC PLANT; VIRUS RESISTANCE;

CARICA; CYSTEINE ENDOPEPTIDASES; GENE SILENCING; GENETIC ENHANCEMENT; GENOME, PLANT; PLANT DISEASES; POTYVIRIDAE; VIRAL PROTEINS;

CARICA PAPAYA; PAPAYA RINGSPOT VIRUS; POTYVIRUS;

EID: 73549101130     PISSN: 10736085     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12033-009-9205-5     Document Type: Article

References (30)

1. Purcifull, D. E., Edwardson, J. R., Hiebert, E., & Gonsalves, D. (1984). Papaya ringspot virus. CMI/AAB description of plant viruses. No.292. Wallingford, UK: CAB International.
2. S Urcuqui-Inchima AL Haenni F Bernardi 2001 Potyvirus proteins: A wealth of functions Virus Research 74 157 175 10.1016/S0168-1702(01)00220-9 1:CAS:528:DC%2BD3MXhsFSisbc%3D (Pubitemid 32168202)
3. S Lius RM Manshardt MMM Fitch JL Slightom JC Sanford D Gonsalves 1997 Pathogen-derived resistance provides papaya with effective protection against papaya ringspot virus Molecular Breeding 3 161 168 10.1023/A:1009614508659
4. D Gonsalves 1998 Control of papaya ringspot virus in papaya: A case study Annual Review of Phytopathology 36 415 437 10.1146/annurev.phyto.36.1.415 1:CAS:528:DyaK1cXmtlalt7k%3D (Pubitemid 28456415)
5. CH Chiang JJ Wang FJ Jan SD Yeh D Gonsalves 2001 Comparative reactions of recombinant papaya ringspot viruses with chimeric coat protein (CP) genes and wild-type viruses on CP-transgenic papaya Journal of General Virology 82 2827 2836 1:CAS:528:DC%2BD3MXotlamsrs%3D
6. S Tripathi H-J Bau L-F Chen SD Yeh 2004 The ability of Papaya ringspot virus strains overcoming the transgenic resistance of papaya conferred by the coat protein gene is not correlated with higher degrees of sequence divergence from the transgene European Journal of Plant Pathology 110 871 882 10.1007/s10658-004-0607-8 1:CAS:528:DC%2BD2cXovVOjtLc%3D (Pubitemid 40134224)
7. P Ruanjan S Kertbundit M Juricek 2007 Post-transcriptional gene silencing is involved in resistance of transgenic papayas to papaya ringspot virus Biologia Plantarum 51 517 520 10.1007/s10535-007-0110-0 1:CAS:528: DC%2BD2sXhsVeksLnJ (Pubitemid 46956700)
8. SV Ramesh AK Mishra S Praveen 2007 Hairpin RNA mediated strategies for silencing of Tomato leaf curl virus AC1 and AC4 genes for effective resistance in plants Oligonucleotide 17 251 257 10.1089/oli.2006.0063 1:CAS:528: DC%2BD2sXnsl2nsr4%3D (Pubitemid 47124421)
9. S Praveen SK Mangrauthia 2006 Viral suppressors: Small RNAs regulators Indian Journal of Virology 17 62 77
10. SW Ding O Voinnet 2007 Antiviral immunity directed by small RNAs Cell 130 413 426 10.1016/j.cell.2007.07.039 1:CAS:528:DC%2BD2sXptlyntLY%3D (Pubitemid 47198311)
11. S Praveen SK Mangrauthia P Singh AK Mishra 2008 Behavior of RNAi suppressor protein 2b of Cucumber mosaic virus in planta in presence and absence of virus Virus Genes 37 96 102 10.1007/s11262-008-0232-2 1:CAS:528: DC%2BD1cXntFKmu7k%3D
12. R Anandlakshmi GJ Pruss X Ge R Marathe AC Mallory TH Smith VB Vance 1998 A viral suppressor of gene silencing in plant Proceedings of the National Academy of Sciences of the United States of America 95 13079 13084 10.1073/pnas.95.22.13079 (Pubitemid 28509527)
13. SK Mangrauthia RK Jain S Praveen 2008 Sequence motifs comparisons establish a functional portrait of a multifunctional protein HC-Pro from Papaya Ringspot Potyvirus Journal of Plant Biochemistry and Biotechnology 17 201 204 1:CAS:528:DC%2BD1cXhtFGgsL7K
14. GJ Pruss X Ge XM Shi JC Carrington VV Bownman 1997 Plant viral synergism: The potyviral genome encoded a broad-range pathogenicity enhancer that transactivates replication of heterologous viruses The Plant Cell 9 859 868 10.1105/tpc.9.6.859 1:CAS:528:DyaK2sXktFClsr0%3D (Pubitemid 28173837)
15. Y-K Yap J Duangjit S Panyim 2009 N-terminal of Papaya ringspot virus type-W (PRSV-W) helper component proteinase (HcPro) is essential for PRSV systemic infection in zucchini Virus Genes 38 461 467 10.1007/s1262-009-0348-z 10.1007/s11262-009-0348-z 1:CAS:528:DC%2BD1MXksFejsr0%3D
16. P Dunoyer CH Lecellier EA Parizotto C Himber O Voinnet 2004 Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing Plant Cell 16 1235 1250 10.1105/tpc.020719 1:CAS:528: DC%2BD2cXktlOqsbs%3D (Pubitemid 38641517)
17. S Tripathi JY Suzuki SA Ferreira D Gonsalves 2008 Papaya ringspot virus-P: Characteristics, pathogenicity, sequence variability and control Molecular Plant Pathology 9 269 280 10.1111/j.1364-3703.2008.00467.x 1:CAS:528:DC%2BD1cXmvFSiur0%3D (Pubitemid 351550685)
18. TA Hall 1999 BioEdit: A user friendly biological sequence alignment editor and analysis programs for windows 95/98/NT Nucleic Acids Symposium Series 41 95 98 1:CAS:528:DC%2BD3cXhtVyjs7Y%3D
19. R Hofgen L Willmitzer 1988 Storage of competent cells for Agrobacterium transformation Nucleic Acids Research 16 9877 10.1093/nar/16.20.9877 1:STN:280:DyaL1M%2FktFGqsA%3D%3D
20. McCormick, S. (1991). Transformation of tomato with Agrobacterium tumefaciens. In: Lindsey, K.(ed.): Plant tissue culture manual. B6, 1-9. Kluwer Academic Publishers, The Netherlands.
21. S Agarwal MK Reddy RK Jain 2009 Production of polyclonal antibodies using recombinant coat protein of papaya ringspot virus and their use in immunodiagnosis Journal of Plant Biochemistry and Biotechnology 18 109 111 1:CAS:528:DC%2BD1MXktFKgsrk%3D
22. Landt, O. (2001). Selection of hybridization probes for real-time quantification and genetic analysis. In S. Meuer, C. Wittwer, & K. Nakagawara (Eds.), Rapid cycle real-time PCR, methods and applications (pp. 35-41). Heidelberg-Germany: Springer.
23. SM Elbashir W Lendeckel T Tuschl 2001 RNA interference is mediated by 21- and 22-nucleotide RNAs Genes and Development 15 188 200 10.1101/gad.862301 1:CAS:528:DC%2BD3MXhvVOjtbg%3D (Pubitemid 32107664)
24. LA Selth JW Randles MA Rezaian 2004 Host responses to transient expression of individual genes encoded by Tomato leaf curl virus Molecular Plant-Microbe Interactions 17 27 33 10.1094/MPMI.2004.17.1.27 1:CAS:528:DC%2BD2cXivVSltr8%3D
25. P Gonzalez-Jara F Tenllado B Martinez-Garcia FA Atencio D Barajas M Vargas J Diaz-Ruiz JR Diaz-Ruiz 2004 Host dependent differences during synergistic infection by potyvirus with Potato virus X Molecular Plant Pathology 5 29 35 10.1111/j.1364-3703.2004.00202.x (Pubitemid 38171206)
26. BJ Shi SW Ding RH Symons 1997 In vivo expression of an overlapping gene encoded by the cucumoviruses Journal of General Virology 78 237 241 1:CAS:528:DyaK2sXmsl2nsw%3D%3D
27. S Mlotshwa SE Schauer TH Smith AC Mallory JM Herr B Roth DS Merchant A Ray LH Bowman VB Vance 2005 Ectopic DICER-LIKE1 expression in P1/HcPro Arabidopsis rescues phenotypic anomalies but not defects in microRNA and silencing pathways Plant Cell 17 2873 2885 10.1105/tpc.105.036608 1:CAS:528:DC%2BD2MXht1OgtLrF
28. DW Thornbury JFJH Van Den Heuvel JA Lesnaw TP Pirone 1993 Expression of potyvirus proteins in insect cells infected with a recombinant baculovirus Journal of General Virology 74 2731 2735 10.1099/0022-1317-74-12-2731 1:CAS:528:DyaK2cXntlWitA%3D%3D
29. L Lakatos T Csorba V Pantaleo EJ Chapman JC Carrington YP Liu VV Dolja LF Calvino JJ Lopez-Moya J Burgyan 2006 Small RNA binding is a common strategy to suppress RNA silencing by several viral suppressors EMBO Journal 25 2768 2780 10.1038/sj.emboj.7601164 1:CAS:528:DC%2BD28XlvFKhsLw%3D (Pubitemid 43980384)
30. Z Merai Z Kerenyi S Kertesz M Magna L Lakatos D Silhavy 2006 Double-stranded RNA binding may be a general plant viral strategy to suppress RNA silencing Journal of Virology 80 5747 5756 10.1128/JVI.01963-05 1:CAS:528:DC%2BD28XlsFWnur0%3D (Pubitemid 43849153)