-
1
-
-
0033529565
-
-
Kornberg, R. D.; Lorch, Y. Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome. 1999, 98, 285-294.
-
(1999)
Twenty-five Years of the Nucleosome, Fundamental Particle of the Eukaryote Chromosome.
, vol.98
, pp. 285-294
-
-
Kornberg, R.D.1
Lorch, Y.2
-
2
-
-
0035839136
-
Translating the histone code
-
Jenuwein, T.; Allis, C. D. Translating the histone code. Science 2001, 295, 1074-1080.
-
(2001)
Science
, vol.295
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
3
-
-
6044256118
-
Histones and histone modifications
-
Peterson, C. L.; Laniel, M. A. Histones and histone modifications. Curr. Biol. 2004, 14, R546-551.
-
(2004)
Curr. Biol.
, vol.14
-
-
Peterson, C.L.1
Laniel, M.A.2
-
4
-
-
0032030770
-
Histone acetylation and transcriptional regulatory mechanisms
-
Strahl, K. Histone acetylation and transcriptional regulatory mechanism. Gene Dev. 1998, 12, 599-606. (Pubitemid 28134293)
-
(1998)
Genes and Development
, vol.12
, Issue.5
, pp. 599-606
-
-
Struhl, K.1
-
5
-
-
1942471702
-
Epigenetics and cancer: Implications for drag discovery and safety assessment
-
Moggs, J. G.; Goodman, J. I.; Trosko, J. E.; Roberts, R. A. Epigenetics and cancer: implications for drag discovery and safety assessment. Toxicol. APPl, Pharmacol. 2004, 196, 422-1130
-
(2004)
Toxicol. APPl, Pharmacol.
, vol.196
, pp. 422-1130
-
-
Moggs, J.G.1
Goodman, J.I.2
Trosko, J.E.3
Robert, R.A.4
-
6
-
-
67649986497
-
Inherent stereospecificity in the reaction of anatoxin B1. 8,9-epoxide with deoxyguanosine and efficiency of DNA catalysis
-
Brown, K. L.; Bren, U.; Stone, M. P.; Guengerich, F. P. Inherent stereospecificity in the reaction of anatoxin B1. 8,9-epoxide with deoxyguanosine and efficiency of DNA catalysis. Chem., Res. Toxicol. 2009, 22, 913-917.
-
(2009)
Chem., Res. Toxicol.
, vol.22
, pp. 913-917
-
-
Brown, K.L.1
Bren, U.2
Stone, M.P.3
Guengerich, F.P.4
-
7
-
-
68949221446
-
Steile and electrostatic effects at the C2 atom substituent influence replication and miscoding of the DNA deamination product deoxyxanthosine and analogs by DNA polymerases
-
Zhang, H.; Bren, U.; Kozekov, I. D.; Rizzo, C. J.; Stec, D. F.; Guengerich, F. P. Steile and electrostatic effects at the C2 atom substituent influence replication and miscoding of the DNA deamination product deoxyxanthosine and analogs by DNA polymerases. J. Mol. Biol. 2009, 392, 251-269.
-
(2009)
J. Mol. Biol.
, vol.392
, pp. 251-269
-
-
Zhang, H.1
Bren, U.2
Kozekov, I.D.3
Rizzo, C.J.4
Stec, D.F.5
Guengerich, F.P.6
-
8
-
-
0037291214
-
+-dependent tubulin deacetylase
-
DOI 10.1016/S1097-2765(03)00038-8
-
North, B. J.; Marshall, B. L.; Borra, M. T.; Denu, J. M.; Verdin, E. The human Sir2 ortholog, SIRT2, is an NAD+-dependent tubulin deacetylase. Mol. Cell 2003, 11, 437-444 (Pubitemid 36293837)
-
(2003)
Molecular Cell
, vol.11
, Issue.2
, pp. 437-444
-
-
North, B.J.1
Marshall, B.L.2
Borra, M.T.3
Denu, J.M.4
Verdin, E.5
-
9
-
-
0037161744
-
HDAC6 is a microtubuleassociated deacetylase
-
Hubbert, C.; Guardiola, A.; Shao, R.; Kawaguchi, Y.; Ito, A.; Nixon, A.; Yoshida, M.; Wang, X.-F.; Yao, T.-P. HDAC6 is a microtubuleassociated deacetylase. Nature 2002, 417, 455-458.
-
(2002)
Nature
, vol.417
, pp. 455-458
-
-
Hubbert, C.1
Guardiola, A.2
Shao, R.3
Kawaguchi, Y.4
Ito, A.5
Nixon, A.6
Yoshida, M.7
Wang, X.-F.8
Yao, T.-P.9
-
10
-
-
27944433010
-
Structure and activity of enzymes that remove histone modifications
-
Holbert, M. A.; Marmorstein, R. Structure and activity of enzymes that remove histone modifications. Curr. Opin. Struct. Biol. 2005, 15, 673-680.
-
(2005)
Curr. Opin. Struct. Biol.
, vol.15
, pp. 673-680
-
-
Holbert, M.A.1
Marmorstein, R.2
-
11
-
-
4344688693
-
Histone deacetylase inhibitors
-
Marks, P. A.; Richon, V. M.; Miller, T.; Kelly, W. K. Histone deacetylase inhibitors. Adv Cancer Res. 2004, 91, 137-168.
-
(2004)
Adv Cancer Res.
, vol.91
, pp. 137-168
-
-
Marks, P.A.1
Richon, V.M.2
Miller, T.3
Kelly, W.K.4
-
12
-
-
3242765335
-
Histone deacetylase inhibitors - A new tool to treat cancer
-
DOI 10.1016/j.ctrv.2004.04.006, PII S0305737204000787
-
Somech, R.; Izraeli, S.; Amos, J. S. Histone deacetylase inhibitors-a new tool to treat cancer. Cancer Treat. Rev. 2004, 30, 461-472. (Pubitemid 38968126)
-
(2004)
Cancer Treatment Reviews
, vol.30
, Issue.5
, pp. 461-472
-
-
Somech, R.1
Izraeli, S.2
Simon, A.J.3
-
13
-
-
12444321545
-
Phase i clinical trial of histone deacetylase inhibitor: Suberoylanilide hydroxamic acid administered intravenously
-
Kelly, W. K.; Richon, V. M.; O'Connor, O.; Curley, T.; MacGregorCurtelli, B.; Tong, W.; Klang, M.; Schwartz, L.; Richardson, S.; Rosa, E.; Drobnjak, M.; Cordon-Cordo, C.; Chiao, J. H.; Rifkind, R.; Marks, P. A.; Scher, H. Phase I Clinical Trial of Histone Deacetylase Inhibitor: Suberoylanilide Hydroxamic Acid Administered Intravenously. Clin. Cancer- 2003, 9, 3578-3588. (Pubitemid 37169221)
-
(2003)
Clinical Cancer Research
, vol.9
, Issue.10
, pp. 3578-3588
-
-
Kelly, W.K.1
Richon, V.M.2
O'Connor, O.3
Curley, T.4
MacGregor-Curtelli, B.5
Tong, W.6
Klang, M.7
Schwartz, L.8
Richardson, S.9
Rosa, E.10
Drobnjak, M.11
Cordon-Cordo, C.12
Chiao, J.H.13
Rifkind, R.14
Marks, P.A.15
Scher, H.16
-
14
-
-
0034880682
-
Impact of the putative differentiating agent sodium phenylbutyrate on myelodysplastic syndromes and acute myeloid leukemia
-
Gore, S. D.; Weng, L.-.I.; Zhai, S.; Figg, W. D.; Donehower, R. C.; Dover, G. J.; Grever, M.; Griffin, C. A.; Grochow, L. B.; Rowinsky, E. K.; Zabalena, Y.; Hawkins, A. L.; Burks, K.; Miller, C. B. Impact of the putative differentiating agent sodium phenylbutyrate on myelodysplastic syndromes and acute myeloid leukemia. Clin. Cancer Res. 2001, 7, 2330-2339.
-
(2001)
Clin. Cancer Res.
, vol.7
, pp. 2330-2339
-
-
Gore, S.D.1
Weng, L.-I.2
Zhai, S.3
Figg, W.D.4
Donehower, R.C.5
Dover, G.J.6
Grever, M.7
Griffin, C.A.8
Grochow, L.B.9
Rowinsky, E.K.10
Zabalena, Y.11
Hawkins, A.L.12
Burks, K.13
Miller, C.B.14
-
15
-
-
10844248177
-
Phase i study of oral CI-994 in combination with carboplatin and paclitaxel in the treatment of patients with advanced solid tumors
-
DOI 10.1081/CNV-200039852
-
Pauer, L. R.; Olivares, J.; Cunningham, C.; Williams, A.; Grove, W.; Kraker, A.; Olson, S.; Nemunaitis, J. Phase I study of oral CI-994 in combination with carboplatin and paclitaxel in the treatment of patients with, advanced solid tumors. Cancer Invest.- 2004, 22, 886-896. (Pubitemid 39665354)
-
(2004)
Cancer Investigation
, vol.22
, Issue.6
, pp. 886-896
-
-
Pauer, L.R.1
Olivares, J.2
Cunningham, C.3
Williams, A.4
Grove, W.5
Kraker, A.6
Olson, S.7
Nemunaitis, J.8
-
16
-
-
33745629366
-
Gemcitabine plus CI-994 offers no advantage over gemcitabine alone in the treatment of patients with advanced pancreatic cancer: Results of a phase II randomized, doubleblind, placebo-controlled, multicenter study
-
Richards, D. A.; Boehm, K. A.; Waterhouse, D. M.; Wagener, D. J.; Krishnamurthi, S. S.; Rosemurgy, A.; Grove, W.; Macdonald, K.; Gulyas, S.; Clark, M.; Dasse, K. D. Gemcitabine plus CI-994 offers no advantage over gemcitabine alone in the treatment of patients with advanced pancreatic cancer: results of a phase II randomized, doubleblind, placebo-controlled, multicenter study. Ann. Oncol. 2006, 17, 1096-1102.
-
(2006)
Ann. Oncol.
, vol.17
, pp. 1096-1102
-
-
Richards, D.A.1
Boehm, K.A.2
Waterhouse, D.M.3
Wagener, D.J.4
Krishnamurthi, S.S.5
Rosemurgy, A.6
Grove, W.7
Macdonald, K.8
Gulyas, S.9
Clark, M.10
Dasse, K.D.11
-
17
-
-
18644379905
-
A phase i trial of Depsipeptide (FR901228) in patients with advanced cancer
-
DOI 10.1046/j.1359-4117.2002.01039.x
-
Marshall, J. L.; Rizvi, N.; Kauh, J.; Dahut, W.; Figuera, M.; Rang, M. H.; Figg, W. D.; Wainer, I.; Chaissang, C.; Li, M. Z.; Hawkins, M. J. A phase I trial of depsipeptide (FR901228) in patients with advanced cancer. J. Em. Ther. Oncol. 2002, 2, 325-332. (Pubitemid 35265981)
-
(2002)
Journal of Experimental Therapeutics and Oncology
, vol.2
, Issue.6
, pp. 325-332
-
-
Marshall, J.L.1
Rizvi, N.2
Kauh, J.3
Dahut, W.4
Figuera, M.5
Kang, M.H.6
Figg, W.D.7
Wainer, I.8
Chaissang, C.9
Zhaoyang Li, M.10
Hawkins, M.J.11
-
18
-
-
0033539092
-
Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors
-
Finnin, M. S.; Donigian, J. R.; Cohen, A.; Richon, V. M.; Rifkind, R. A.; Marks, P. A.; Breslow, R.; Pavletich, N. P. Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors. Nature 1999, 401, 188-193.
-
(1999)
Nature
, vol.401
, pp. 188-193
-
-
Donigian, J.R.1
Cohen, A.2
Richon, V.M.3
Rifkind, R.A.4
Marks, P.A.5
Breslow, R.6
Pavletich, N.P.7
-
19
-
-
27344457467
-
Crystal structure of a bacterial class 2 histone deacetylase homologue
-
Nielsen, T. K.; Hildmann, C.; Dickmanns, A.; Schwienhorst, A.; Ficner, R. J. Crystal structure of a bacterial class 2 histone deacetylase homologue. J. Mol. Biol. 2005, 354, 107-120.
-
(2005)
J. Mol. Biol.
, vol.354
, pp. 107-120
-
-
Nielsen, T.K.1
Hildmann, C.2
Dickmanns, A.3
Schwienhorst, A.4
Ficner, R.J.5
-
20
-
-
3142562372
-
Structural snapshots of human HDAC8 provide insights into the class i histone deacetylases
-
Somoza, J. R.; Skene, R. J.; Katz, B. A.; Mol, C.; Ho, J. D.; Jennings, A. J.; Luong, C.; Arvai, A.; Buggy, E.; Chi, J.; Tang, B. C.; Sang, E.; Verner, R.; Wynands, E. M.; Leahy, D. R.; Dougan, G.; Snell, M.; Navre, J. J.; Knuth, M. W.; Swanson, R. V.; McRee, D. E.; Tari, L. W. Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases. Structure 2004, 12, 1325-1334.
-
(2004)
Structure
, vol.12
, pp. 1325-1334
-
-
Somoza, J.R.1
Skene, R.J.2
Katz, B.A.3
Mol, C.4
Ho, J.D.5
Jennings, A.J.6
Luong, C.7
Arvai, A.8
Buggy, E.9
Chi, J.10
Tang, B.C.11
Sang, E.12
Verner, R.13
Wynands, E.M.14
Leahy, D.R.15
Dougan, G.16
Snell, M.17
Navre, J.J.18
Knuth, M.W.19
Swanson, R.V.20
McRee, D.E.21
Tari, L.W.22
more..
-
21
-
-
55549094833
-
Structural and functional analysis of the human Hdac4 catalytic domain. Reveals a regulatory zinc-binding domain
-
Bottomley, M. J.; Lo Surdo, P.; Di Giovine, P.; Grillo, A.; Scarpelli, R.; Ferrigno, F.; Jones, P.; Neddermann, P.; De Francesco, R.; Steinkuhler, C.; Gallinari, P.; Carfi, A. Structural and Functional Analysis of the Human Hdac4 Catalytic Domain. Reveals a Regulatory Zinc-Binding Domain. J. Biol. Chem. 2008, 283, 26694-26704.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 26694-26704
-
-
Bottomley, M.J.1
Lo Surdo, P.2
Di Giovine, P.3
Grillo, A.4
Scarpelli, R.5
Ferrigno, F.6
Jones, P.7
Neddermann, P.8
De Francesco, R.9
Steinkuhler, C.10
Gallinari, P.11
Carfi, A.12
-
22
-
-
73349102441
-
-
Manuscript in preparation.
-
Schuetz, A.; Min, J. R.; Allali-Hassani, A.; Loppnau P.; Kwiatkowski, N. P.; Mazitschek, R.; Edwards, A. M.; Arrowsmith, C. H.; Vedadi, M.; Bochkarev, A. Plotnikov, A. N. Crystal structure of the human histone deacetylase IIDAC7. Manuscript in preparation.
-
Crystal Structure of the Human Histone Deacetylase IIDAC7
-
-
Schuetz, A.1
Min, J.R.2
Allali-Hassani, A.3
Loppnau, P.4
Kwiatkowski, N.P.5
Mazitschek, R.6
Edwards, A.M.7
Arrowsmith, C.H.8
Vedadi, M.9
Bochkarev, A.10
Plotnikov, A.N.11
-
23
-
-
27444435580
-
Toward selective histone deacetylase inhibitor design: Homology modeling, docking studies, and molecular dynamics simulations of human class i histone deacetylases
-
DOI 10.1021/jm0505011
-
Wang, D. F.; Helquist, P.; Wiech, N. L.; Wiest, O. Toward selective histone deacetylase inhibitor design: homology modeling, docking studies, and molecular dynamics simulations of human class I histone deacetylases. J. Med. Chem. 2005, 48, 6936-6947. (Pubitemid 41533115)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.22
, pp. 6936-6947
-
-
Wang, D.-F.1
Helquist, P.2
Wiech, N.L.3
Wiest, O.4
-
24
-
-
0346099272
-
Design, synthesis, and activity of HDAC inhibitors with, a N-formyl hydroxylamine head group
-
Wu, T. Y. H.; Hassig, C.; Wu, Y.; Ding, S.; Schultz, P. G. Design, synthesis, and activity of HDAC inhibitors with, a N-formyl hydroxylamine head group. Bioorg. Med, Chem., Lett. 2004, 14, 449-453.
-
(2004)
Bioorg. Med, Chem., Lett.
, vol.14
, pp. 449-453
-
-
Wu, T.Y.H.1
Hassig, C.2
Wu, Y.3
Ding, S.4
Schultz, P.G.5
-
25
-
-
45749114198
-
Chemistry, biology, and QSAR studies of substituted biaryl hydroxamates and mercaptoacetamides as HDAC inhibitorsnanomolar-potency inhibitors of pancreatic cancer cell growth
-
Kozikowski, A. P.; Chen, Y.; Gaysin, A. M.; Savoy, D. N.; Billadeau, D. D.; Kim, K. H. Chemistry, biology, and QSAR studies of substituted biaryl hydroxamates and mercaptoacetamides as HDAC inhibitorsnanomolar-potency inhibitors of pancreatic cancer cell growth. ChemMedChem 2008, 3, 487-501.
-
(2008)
ChemMedChem
, vol.3
, pp. 487-501
-
-
Kozikowski, A.P.1
Chen, Y.2
Gaysin, A.M.3
Savoy, D.N.4
Billadeau, D.D.5
Kim, K.H.6
-
26
-
-
73349142954
-
-
WO Patent 2005/028447, Mar 31
-
Chen, D.; Deng, W.; Sangthongpitag, K.; Song, H. Y.; Sun, E. T.; Yu, N.; Zou, Y. Benzimidazole derivatives: preparation and pharmaceutical application. WO Patent 2005/028447, Mar 31, 2005.
-
(2005)
Benzimidazole Derivatives: Preparation and Pharmaceutical Application
-
-
Chen, D.1
Deng, W.2
Sangthongpitag, K.3
Song, H.Y.4
Sun, E.T.5
Yu, N.6
Zou, Y.7
-
27
-
-
73349138223
-
-
WO Patent 2006/101456, Sep 28
-
Deng, W.; Chen, D.; Zhou, Y. Bicyclic heterocycles: preparation, and pharmaceutical application. WO Patent 2006/101456, Sep 28, 2006.
-
(2006)
Bicyclic Heterocycles: Preparation, and Pharmaceutical Application
-
-
Deng, W.1
Chen, D.2
Zhou, Y.3
-
28
-
-
73349093363
-
-
WO Patent 2007/109178, Sep 27
-
Buggy, J. J.; Balasubramanian, S.; Verner, E.; Tai, V. W.-F.; Lee, C.-S. Indole derivatives as inhibitors of histone deacetylase. WO Patent 2007/109178, Sep 27, 2007.
-
(2007)
Indole Derivatives as Inhibitors of Histone Deacetylase
-
-
Buggy, J.J.1
Balasubramanian, S.2
Verner, E.3
Tai, V.W.-F.4
Lee, C.-S.5
-
29
-
-
34247376560
-
Design and evaluation of 'Linkerless' hydroxamic acids as selective HDAC8 inhibitors
-
KrennIIrabec, K.; Marshall, B. L.; Hedglin, M.; Verdin, E.; Ulrich, S. M. Design and Evaluation of 'Linkerless' hydroxamic acids as selective HDAC8 inhibitors. Bioorg., Med. Chem. Lett. 2007, 17, 2874-2878.
-
(2007)
Bioorg., Med. Chem. Lett.
, vol.17
, pp. 2874-2878
-
-
Krenniirabec, K.1
Marshall, B.L.2
Hedglin, M.3
Verdin, E.4
Ulrich, S.M.5
-
30
-
-
0035961036
-
Synthesis of 7200 small molecules based on a substructural analysis of the histone deacetylase inhibitors trichostatin and trapoxin
-
Sternson, S. M.; Wong, J. C.; Grozinger, C. M.; Schreiber, S. L. Synthesis of 7200 small molecules based on a substructural analysis of the histone deacetylase inhibitors trichostatin and trapoxin. Ore. Lett. 2001, 3, 4239-4242.
-
(2001)
Ore. Lett.
, vol.3
, pp. 4239-4242
-
-
Sternson, S.M.1
Wong, J.C.2
Grozinger, C.M.3
Schreiber, S.L.4
-
31
-
-
0344640906
-
Domain-selective small-molecule inhibitor of histone deactylase 6 (HDAC6)-mediated tubulin deacetylation
-
Haggarty, S. J.; Koeller, K. M.; Wong, J. C.; Grozinger, C. M. Schreiber, S. L. Domain-selective small-molecule inhibitor of histone deactylase 6 (HDAC6)-mediated tubulin deacetylation. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 4389-4394.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 4389-4394
-
-
Haggarty, S.J.1
Koeller, K.M.2
Wong, J.C.3
Grozinger, C.M.4
Schreiber, S.L.5
-
32
-
-
0142179154
-
Identification of novel isoform-selective inhibitors within class I histone deacetylases
-
DOI 10.1124/jpet.103.055541
-
Hu, E.; Dul, E.; Sung, C.-M.; Chen, Z.; Kirkpatrick, R.; Zhang, G.F.; Johanson, K.; Liu, R.; Lago, A.; Hofmann, G.; Macarron, R.; De Los Frailes, M.; Perez, P.; Krawiec, J.; Winkler, J.; Jaye, M. Identification of Novel Isoform-Selective Inhibitors within Class I Histone Deacetylases. J. Pharmacol. Exp. Ther- 2003, 307, 720-728. (Pubitemid 37310689)
-
(2003)
Journal of Pharmacology and Experimental Therapeutics
, vol.307
, Issue.2
, pp. 720-728
-
-
Hu, E.1
Dul, E.2
Sung, C.-M.3
Chen, Z.4
Kirkpatrick, R.5
Zhang, G.-F.6
Johanson, K.7
Liu, R.8
Lago, A.9
Hofmann, G.10
Macarron, R.11
De Los Frailes, M.12
Perez, P.13
Krawiec, J.14
Winkler, J.15
Jaye, M.16
-
33
-
-
3242793175
-
Expression of histone deacetylase 8, a class i histone deacetylase, is restricted to cells showing smooth muscle differentiation in normal human tissues
-
Waltregny, D.; De Leval, L.; Glenisson, W.; Ly Tran, S.; North, B. J.; Bellahcene, A.; Weidle, U.; Verdin, E.; Castronovo, V. Expression of Histone Deacetylase 8, a Class I Histone Deacetylase, Is Restricted to Cells Showing Smooth Muscle Differentiation in Normal Human Tissues. Am. J. Pathol- 2004, 165, 553-564. (Pubitemid 38971385)
-
(2004)
American Journal of Pathology
, vol.165
, Issue.2
, pp. 553-564
-
-
Waltregny, D.1
De Leval, L.2
Glenisson, W.3
Ly Tran, S.4
North, B.J.5
Bellahcene, A.6
Weidle, U.7
Verdin, E.8
Castronovo, V.9
-
34
-
-
20444487771
-
Histone deacetylase HDAC8 associates with smooth muscle α-actin and is essential for smooth muscle cell contractility
-
DOI 10.1096/fj.04-2303fje
-
Waltregny, D.; Glenisson, W.; Tran, S. L.; North, B. J.; Verdin, E.; Colige, A.; Castronovo, V. Histone deacetylase HDAC8 associates with smooth muscle-actin and is essential for smooth muscle cell contractility. FASEB J. 2005, 19, 966-968. (Pubitemid 40827719)
-
(2005)
FASEB Journal
, vol.19
, Issue.8
, pp. 966-968
-
-
Waltregny, D.1
Glenisson, W.2
Tran, S.L.3
North, B.J.4
Verdin, E.5
Colige, A.6
Castronovo, V.7
-
35
-
-
0037220731
-
The inv(16) fusion protein associates with corepressors via a smooth muscle myosin heavy-chain domain
-
Durst, K. L.; Lutterbach, B.; Kummalue, T.; Friedman, A. D.; Hiebert, S. W. The inv(16) Fusion Protein Associates with Corepressors via a Smooth Muscle Myosin Heavy-Chain Domain. Mol. Cell. Biol. 2003, 23, 607-619.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 607-619
-
-
Durst, K.L.1
Lutterbach, B.2
Kummalue, T.3
Friedman, A.D.4
Hiebert, S.W.5
-
36
-
-
19944426043
-
Mutations and deletions of the CBP gene in human lung cancer
-
Kishimoto, M.; Kohno, T.; Okudela, K.; Otsuka, A.; Saski, H.; Tanabe, C.; Sakiyama, T.; Hirama, C.; Kitabayashi, I.; Minna, J. D.; Takenoshita, S.; Yokota, J. Mutations and deletions of the CBP gene in human lung cancer. Clin. Cancer Res. 2005, 11, 512-519. (Pubitemid 40116874)
-
(2005)
Clinical Cancer Research
, vol.11
, Issue.2
, pp. 512-519
-
-
Kishimoto, M.1
Kohno, T.2
Okudela, K.3
Otsuka, A.4
Sasaki, H.5
Tanabe, C.6
Sakiyama, T.7
Hirama, C.8
Kitabayashi, I.9
Minna, J.D.10
Takenoshita, S.11
Yokota, J.12
-
37
-
-
36049045474
-
Expression of HDAC1 and CBP/p300 in human colorectal carcinomas
-
DOI 10.1136/jcp.2005.029165
-
Ishihama, K.; Yamakawa, M.; Semba, S.; Takeda, H.; Kawata, S.; Kimura, S.; Kimura, W. Expression of HDACl and CBP/p300 in human colorectal carcinomas. J. Clin. Pathol. 2007, 60, 1205-1210. (Pubitemid 350084539)
-
(2007)
Journal of Clinical Pathology
, vol.60
, Issue.11
, pp. 1205-1210
-
-
Ishihama, K.1
Yamakawa, M.2
Semba, S.3
Takeda, H.4
Kawata, S.5
Kimura, S.6
Kimura, W.7
-
38
-
-
2342603414
-
Induction of HDAC2 expression upon loss of APC in colorectal tumorigenesis
-
DOI 10.1016/S1535-6108(04)00114-X, PII S153561080400114X
-
Zhu, P.; Martin, E.; Mengwasser, J.; Schlag, P.; Janssen, K.-P.; Göttlicher, M. Induction of HDAC2 expression upon loss of APC in colorectal tumorigenesis. Cancer Cell 2004, 5, 455-463. (Pubitemid 38610247)
-
(2004)
Cancer Cell
, vol.5
, Issue.5
, pp. 455-463
-
-
Zhu, P.1
Martin, E.2
Mengwasser, J.3
Schlag, P.4
Janssen, K.-P.5
Gottlicher, M.6
-
39
-
-
34347339526
-
Role for histone deacetylase 1 in human tumor cell proliferation
-
DOI 10.1128/MCB.00494-07
-
Senese, S.; Zaragoza, K.; Minardi, S.; Muradore, I.; Ronzoni, S.; Passafaro, A.; Bernard, L.; Draetta, G. F.; Alcalay, M.; Seiser, C.; Chiocca, S. Role for Histone Deacetylase 1 in Human Tumor Cell Proliferation. Mol. Cell. Biol. 2007, 27, 4784-4795. (Pubitemid 47016131)
-
(2007)
Molecular and Cellular Biology
, vol.27
, Issue.13
, pp. 4784-4795
-
-
Senese, S.1
Zaragoza, K.2
Minardi, S.3
Muradore, I.4
Ronzoni, S.5
Passafaro, A.6
Bernard, L.7
Draetta, G.F.8
Alcalay, M.9
Seiser, C.10
Chiocca, S.11
-
40
-
-
33646354640
-
A truncating mutation of HDAC2 in human cancers confers resistance to histone deacetylase inhibition
-
Ropero, S.; Fraga, M. F.; Ballestar, E.; Hamelin, R.; Yamamoto, H.; Boix-Chornet, M.; Caballero, R.; Alaminos, M.; Setien, F.; Paz, M. F.; Herranz, M.; Palacios, J.; Arango, D.; Orntoft, T. F.; Aaltonen, L. A.; Schwartz, Jr. S.; Esteller, M. A truncating mutation of HDAC2 in human cancers confers resistance to histone deacetylase inhibition. Nat. Genet. 2006, 38, 566-569.
-
(2006)
Nat. Genet.
, vol.38
, pp. 566-569
-
-
Ropero, S.1
Fraga, M.F.2
Ballestar, E.3
Hamelin, R.4
Yamamoto, H.5
Boix-Chornet, M.6
Caballero, R.7
Alaminos, M.8
Setien, F.9
Paz, M.F.10
Herranz, M.11
Palacios, J.12
Arango, D.13
Orntoft, T.F.14
Aaltonen, L.A.15
Schwartz Jr., S.16
Esteller, M.17
-
41
-
-
6344222799
-
Crystal structure of a eukaryotic zinc-dependent histone deacetylase, human HDAC8, complexed with a hydroxamic acid inhibitor
-
DOI 10.1073/pnas.0404603101
-
Vannini, A.; Volpari, C.; Filocamo, G.; Casavola, E. C.; Branetti, M.; Renzoni, R.; Chakravarty, P.; Paolini, C.; De Francesco, R.; Gallinari, P.; Steinkuhler, C.; Di Marco, S. Crystal structure of a eukaryotic zinc-dependent histone deacetylase, human HDAC8, complexed with ahydroxamic acid inhibitor. Proc Natl. Acad. Sci. U.S.A. - 2004, 101, 15064-15069. (Pubitemid 39391719)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.42
, pp. 15064-15069
-
-
Vannini, A.1
Volpari, C.2
Filocamo, G.3
Casavola, E.C.4
Brunetti, M.5
Renzoni, D.6
Chakravarty, P.7
Paolini, C.8
De Francesco, R.9
Gallinari, P.10
Steinkuhler, C.11
Di Marco, S.12
-
42
-
-
35548947488
-
Substrate binding to histone deacetylases as shown by the crystal structure of the HDAC8-substrate complex
-
DOI 10.1038/sj.embor.7401047, PII 7401047
-
Vannini, A.; Volpari, C.; Gallinari, P.; Jones, P.; Mattu, M.; Carfi, A.; Defrancesco, R.; Steinkuhler, C.; Di Marco, S. Substrate binding to histone deacetylases as shown by the crystal structure of the HDAC8-substrate complex. EMBO Rep. 2007, 8, 879-884. (Pubitemid 350001433)
-
(2007)
EMBO Reports
, vol.8
, Issue.9
, pp. 879-884
-
-
Vannini, A.1
Volpari, C.2
Gallinari, P.3
Jones, P.4
Steinkuhler, C.5
Di Marco, S.6
-
43
-
-
58149144730
-
Structural studies of human histone deacetylase 8 and its sitespecific variants complexed with substrate and inhibitors
-
Dowling, D. P.; Gantt, S. L.; Gattis, S. G.; Fierke, C. A.; Christiansen, D. W. Structural studies of human histone deacetylase 8 and its sitespecific variants complexed with substrate and inhibitors. Biochemistry 2008, 47, 13554-13563.
-
(2008)
Biochemistry
, vol.47
, pp. 13554-13563
-
-
Dowling, D.P.1
Gantt, S.L.2
Gattis, S.G.3
Fierke, C.A.4
Christiansen, D.W.5
-
44
-
-
0033954256
-
The protein data bank
-
Berman, H. M.; Westbrook, J.; Feng, Z.; Gilliland, G.; Bhat, T. N.; Weissig, H.; Shindyalov, I. N.; Bourne, P. E. The Protein Data Bank. Nucleic Acids Res.- 2000, 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
45
-
-
73349096238
-
-
ver. 7.5; Schrödinger Inc.: Portland, OR
-
Maestro, ver. 7.5; Schrödinger Inc.: Portland, OR, 1999.
-
(1999)
Maestro
-
-
-
46
-
-
0012777850
-
-
ver. 8.5; Schrödinger Inc.: Portland, OR
-
Macromodel, ver. 8.5; Schrödinger Inc.: Portland, OR, 1999.
-
(1999)
Macromodel
-
-
-
47
-
-
11644261806
-
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
-
Morris, G. M.; Goodsell, D. S.; Halliday, R. S.; Huey, R.; Hart, W. E.; Belew, R. K.; Olson, A. J. Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J. Comput Chem. 1998, 19, 1639-1662.
-
(1998)
J. Comput Chem.
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
Olson, A.J.7
-
48
-
-
0031552362
-
Development and validation of a genetic algorithm for flexible docking
-
Jones, G.; Willett, P.; Glen, R. C.; Leach, A. R.; Taylor, R. J. Development and validation of a genetic algorithm for flexible docking. J. Mol. Biol. 1997, 267, 727-748.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 727-748
-
-
Jones, G.1
Willett, P.2
Glen, R.C.3
Leach, A.R.4
Taylor, R.J.5
-
49
-
-
0000577528
-
The object technology framework: An object-oriented, interface to molecular data and its application to collagen
-
Huang, C. C.; Couch, G. S.; Pettersen, E. F.; Ferrin, T. E. The object technology framework: an object-oriented, interface to molecular data and its application to collagen. Pac. Symp. Biocomput. 1996, 1, 724; http://www.cgl.ucsf.edu/chimera
-
(1996)
Pac. Symp. Biocomput.
, vol.1
, pp. 724
-
-
Huang, C.C.1
Couch, G.S.2
Pettersen, E.F.3
Ferrin, T.E.4
-
50
-
-
16344373015
-
Protein homology detection by HMM-HMM comparison
-
Soeding, J. Protein homology detection by HMM-HMM comparison. Bioinformatics 2005, 21, 951-960.
-
(2005)
Bioinformatics
, vol.21
, pp. 951-960
-
-
Soeding, J.1
-
51
-
-
0029887381
-
Hidden Markov models for sequence analysis: Extension and analysis of the basic method
-
Hughey, R.; Krogh, A. Hidden. Markov models for sequence analysis: Extension and analysis of the basic method. Computer Arml. Biosci. 1996, 12, 95-107. (Pubitemid 26166723)
-
(1996)
Computer Applications in the Biosciences
, vol.12
, Issue.2
, pp. 95-107
-
-
Hughey, R.1
Krogh, A.2
-
52
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul, S. F.; Madden, T. L.; Schärfer, A. A.; Zhang, J.; Zhang, Z.; Miller, W.; Lipman, D. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acid Res. 1997, 25, 3389-3402. (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
53
-
-
0033810049
-
Modeling of loops in protein, structures
-
Fiser, A.; Do, R. K.; Sali, A. Modeling of loops in protein, structures. Protein Sci. 2000, 9, 1753.
-
(2000)
Protein Sci.
, vol.9
, pp. 1753
-
-
Fiser, A.1
Do, R.K.2
Sali, A.3
-
54
-
-
73349106778
-
-
Version 4.5; Multivariate Infometric Analysis Srl.: Perugia, Italy
-
GOLPE, Version 4.5; Multivariate Infometric Analysis Srl.: Perugia, Italy, 1999.
-
(1999)
GOLPE
-
-
-
55
-
-
73349112828
-
-
Version. 22a; Molecular Discovery Ltd.: West Way House, Elms Parade, Oxford, U.K.
-
GRID, Version. 22a; Molecular Discovery Ltd.: West Way House, Elms Parade, Oxford, U.K., 2004.
-
(2004)
GRID
-
-
-
56
-
-
43949130430
-
Structural origin of selectivity in class II-selective histone deacetylase inhibitors
-
DOI 10.1021/jm7015254
-
Estiu, G.; Greenberg, E.; Harrison, C. B.; Kwiatkowski, N. P.; Mazitschek, R.; Bradner, J. E.; Wiest, O. Structural origin of selectivity in class II-selective histone deacetylase inhibitors. J. Med. Chem. 2008, 51, 2898-2906. (Pubitemid 351706018)
-
(2008)
Journal of Medicinal Chemistry
, vol.51
, Issue.10
, pp. 2898-2906
-
-
Estiu, G.1
Greenberg, E.2
Harrison, C.B.3
Kwiatkowski, N.P.4
Mazitschek, R.5
Bradner, J.E.6
Wiest, O.7
-
57
-
-
49149123555
-
Development of a receptor-based 3D-QSAR study for the analysis of MMP2, MMP3, and MMP9 inhibitors
-
Tuccinardi, T.; Nuti, E.; Ortore, G.; Rossello, A.; Avramova, S. I.; Martinelli, A. Development of a receptor-based 3D-QSAR study for the analysis of MMP2, MMP3, and MMP9 inhibitors. Bioorg. Med. Chem. Lett. 2008, 16, 7749-7758.
-
(2008)
Bioorg. Med. Chem. Lett.
, vol.16
, pp. 7749-7758
-
-
Tuccinardi, T.1
Nuti, E.2
Ortore, G.3
Rossello, A.4
Avramova, S.I.5
Martinelli, A.6
-
58
-
-
12144291023
-
3-(4-Aroyl-1-methyl-1H-pyrrol-2-yl)-N-hydroxy-2-propenamides as a New Class of Synthetic Histone Deacetylase Inhibitors. 3. Discovery of Novel Lead Compounds through Structure-Based Drug Design and Docking Studies
-
DOI 10.1021/jm031036f
-
Ragno, R.; Mai, A.; Massa, S.; Cerbara, I.; Valente, S.; Bottoni, P.; Scatena, R.; Jesacher, F.; Loidl, P.; Brosch, G. 3-(4-Aroyl-l-methyl1H-pyrrol-2- yl)-N-hydroxy-2-propenamides as a New Class of Synthetic Histone Deacetylase Inhibitors. 3. Discovery of Novel Lead Compounds through Structure-Based Drag Design and Docking Studies. J. Med. Chem 2004, 47, 1351-1359. (Pubitemid 38327463)
-
(2004)
Journal of Medicinal Chemistry
, vol.47
, Issue.6
, pp. 1351-1359
-
-
Ragno, R.1
Mai, A.2
Massa, S.3
Cerbara, I.4
Valente, S.5
Bottoni, P.6
Scatena, R.7
Jesacher, F.8
Loidl, P.9
Brosch, G.10
-
59
-
-
4744370522
-
Subtype selective substrates for histone deacetylases
-
DOI 10.1021/jm0497592
-
Heltweg, B.; Dequiedt, F.; Marshall, B. L.; Brauch, C.; Yoshida, M.; Nishino, N.; Verdin, E.; Jung, M. Subtype selective substrates for histone deacetylases. J. Med Chem 2004, 47, 5235-5243. (Pubitemid 39314921)
-
(2004)
Journal of Medicinal Chemistry
, vol.47
, Issue.21
, pp. 5235-5243
-
-
Heltweg, B.1
Dequiedt, F.2
Marshall, B.L.3
Brauch, C.4
Yoshida, M.5
Nishino, N.6
Verdin, E.7
Jung, M.8
-
60
-
-
43049119236
-
The use of diversity profiling to characterize chemical modulators of the histone deacetylases
-
Blackwell, L.; Noms, J.; Suto, M. C.; Janzen, W. P. The use of diversity profiling to characterize chemical modulators of the histone deacetylases. Life Sci. 2008, 82, 1050-1058.
-
(2008)
Life Sci.
, vol.82
, pp. 1050-1058
-
-
Blackwell, L.1
Noms, J.2
Suto, M.C.3
Janzen, W.P.4
|