Elastic scattering spectroscopy for detection of cancer risk in Barrett's esophagus: Experimental and clinical validation of error removal by orthogonal subtraction for increasing accuracy

Journal of Biomedical Optics

Volumn 14, Issue 4, 2009, Pages

  Zhu, Ying ^a   Fearn, Tom ^a   MacKenzie, Gary ^a   Clark, Ben ^a   Dunn, Jason M ^a   Bigio, Irving J ^b   Bown, Stephen G ^a   Lovat, Laurence B ^a  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

^b BOSTON UNIVERSITY   (United States)

Author keywords

Barrett's esophagus; classification; elastic scattering spectroscopy; linear discriminant analysis; orthogonal projection; pretreatment; principal component analysis; replicated measurements

Indexed keywords

BARRETT'S ESOPHAGUS; ELASTIC SCATTERING SPECTROSCOPY; LINEAR DISCRIMINANT ANALYSIS; ORTHOGONAL PROJECTION; PRE-TREATMENT; PRINCIPAL COMPONENTS; REPLICATED MEASUREMENTS;

DISCRIMINANT ANALYSIS; ELASTIC SCATTERING; ERROR DETECTION; OPTICS; PRINCIPAL COMPONENT ANALYSIS; SPECTROSCOPY; SPECTRUM ANALYSIS; TISSUE;

DISEASES;

ARTICLE; BARRETT ESOPHAGUS; COMPUTER ASSISTED DIAGNOSIS; ELASTOGRAPHY; ESOPHAGUS TUMOR; EVALUATION; HUMAN; METHODOLOGY; PRECANCER; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; SPECTROSCOPY;

BARRETT ESOPHAGUS; DIAGNOSIS, COMPUTER-ASSISTED; ELASTICITY IMAGING TECHNIQUES; ESOPHAGEAL NEOPLASMS; HUMANS; PRECANCEROUS CONDITIONS; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SPECTRUM ANALYSIS;

EID: 73349094422     PISSN: 10833668     EISSN: 15602281     Source Type: Journal    
DOI: 10.1117/1.3194291     Document Type: Article

References (31)

1. A., Newnham, M. J., Quinn, P., Babb, J. Y., Kang, and A., Majeed, " Trends in the subsite and morphology of oesophageal and gastric cancer in England and Wales 1971-1998, ", Aliment Pharmacol. Ther., 17 (5), 665-676 (2003). 2vj ZZZZZZ 0269-2813 10.1046/j.1365-2036.2003.01521.x (Pubitemid 36418890)
2. J. R., Toms, Eds., CancerStats Monograph 2004, Cancer Research UK, London (2004).
3. R. W., Phillips and R. K., Wong, " Barrett's esophagus. Natural history, incidence, etiology, and complications, ", Gastroenterol. Clin. North Am., 20 (4), 791-816 (1991). 4yr ZZZZZZ 0889-8553
4. A. J., Cameron, B. J., Ott, and W. S., Payne, " The incidence of adenocarcinoma in columnar-lined (Barrett's) esophagus, ", N. Engl. J. Med., 313 (14), 857-859 (1985). nej NEJMAG 0028-4793 (Pubitemid 15250200)
5. W. A., Williamson, F. H., Ellis, Jr., S. P., Gibb, D. M., Shahian, H. T., Aretz, G. J., Heatley, and E., Watkins, Jr., " Barrett's esophagus. Prevalence and incidence of adenocarcinoma, ", Arch. Intern Med., 151 (11), 2212-2216 (1991). 2lq AIMDAP 0003-9926 10.1001/archinte.151.11.2212
6. C. S., Robertson, J. F., Mayberry, D. A., Nicholson, P. D., James, and M., Atkinson, " Value of endoscopic surveillance in the detection of neoplastic change in Barrett's oesophagus, ", Br. J. Surg., 75 (8), 760-763 (1988). 3fk BJSUAM 0007-1323 10.1002/bjs.1800750813
7. W., Hameeteman, G. N., Tytgat, H. J., Houthoff, and J. G., van den Tweel, " Barrett's esophagus: development of dysplasia and adenocarcinoma, ", Gastroenterology, 96 (5), 1249-1256 (1989). gst GASTAB 0016-5085 (Pubitemid 19126659)
8. D. S., Levine, R. C., Haggitt, P. L., Blount, P. S., Rabinovitch, V. W., Rusch, and B. J., Reid, " An endoscopic biopsy protocol can differentiate high-grade dysplasia from early adenocarcinoma in Barrett's esophagus, ", Gastroenterology, 105 (1), 40-50 (1993). gst GASTAB 0016-5085 (Pubitemid 23234018)
9. P. S., Rabinovitch, G., Longton, P. L., Blount, D. S., Levine, and B. J., Reid, " Predictors of progression in Barrett's esophagus III: baseline flow cytometric variables, ", Am. J. Gastroenterol., 96 (11), 3071-3083 (2001). 2d6 AJGAAR 0002-9270 10.1111/j.1572-0241.2001.05261.x (Pubitemid 33095344)
10. V. K., Sharma, K. K., Wang, B. F., Overholt, C. J., Lightdale, M. B., Fennerty, P. J., Dean, D. K., Pleskow, R., Chuttani, A., Reymunde, N., Santiago, K. J., Chang, M. B., Kimmey, and D. E., Fleischer, " Balloon-based, circumferential, endoscopic radiofrequency ablation of Barrett's esophagus:, 1-year, follow-up of 100 patients, ", Gastrointest. Endosc., 65 (2), 185-195 (2007). 4qp ZZZZZZ 0016-5107 10.1016/j.gie.2006.09.033 (Pubitemid 46157125)
11. J. W., van Sandick, J. J., van Lanschot, B. W., Kuiken, G. N., Tytgat, G. J., Offerhaus, and H., Obertop, " Impact of endoscopic biopsy surveillance of Barrett's oesophagus on pathological stage and clinical outcome of Barrett's carcinoma, ", Gut, 43 (2), 216-222 (1998). 4su GUTTAK 0017-5749 (Pubitemid 28348324)
12. H., Messmann, R., Knuchel, W., Baumler, A., Holstege, and J., Scholmerich, " Endoscopic fluorescence detection of dysplasia in patients with Barrett's esophagus, ulcerative colitis, or adenomatous polyps after 5-aminolevulinic acid-induced protoporphyrin IX sensitization, ", Gastrointest. Endosc., 49 (1). 97-101 (1999). 4qp ZZZZZZ 0016-5107 10.1016/S0016-5107(99)70453-0 (Pubitemid 29076831)
13. L. B., Lovat and S. G., Bown, " Elastic scattering spectroscopy for detection of dysplasia in Barrett's esophagus, ", Gastroenterol. Clin. North Am., 14 (3), 507-517 (2004). 4yr ZZZZZZ 0889-8553 10.1016/j.giec.2004.03. 006 (Pubitemid 38903215)
14. R., Drezek, A., Dunn, and R., Richards-Kortum, " Light scattering from cells: finite-difference time-domain simulations and goniometric measurements, ", Appl. Opt., 38 (16), 3651-3661 (1999). apo APOPAI 0003-6935 10.1364/AO.38.003651 (Pubitemid 129568245)
15. M. B., Wallace, L. T., Perelman, V., Backman, J. M., Crawford, M., Fitzmaurice, M., Seiler, K., Badizadegan, S. J., Shields, I., Itzkan, R. R., Dasari, J., Van Dam, and M. S., Feld, " Endoscopic detection of dysplasia in patients with Barrett's esophagus using light-scattering spectroscopy, ", Gastroenterology, 119 (3), 677-682 (2000). gst GASTAB 0016-5085 10.1053/gast.2000.16511
16. G., Zonios, L. T., Perelman, V. M., Backman, R., Manoharan, M., Fitzmaurice, J., Van Dam, and M. S., Feld, " Diffuse reflectance spectroscopy of human adenomatous colon polyps, in vivo, ", Appl. Opt., 38 (31), 6628-6637 (1999). apo APOPAI 0003-6935 10.1364/AO.38.006628 (Pubitemid 129567570)
17. R. S., Gurjar, V., Backman, L. T., Perelman, I., Georgakoudi, K., Badizadegan, I., Itzkan, R. R., Dasari, and M. S., Feld, " Imaging human epithelial properties with polarized light-scattering spectroscopy, ", Nat. Med., 7 (11), 1245-1248 (2001). 84o ZZZZZZ 1078-8956 10.1038/nm1101-1245 (Pubitemid 33063781)
18. V., Backman, M. B., Wallace, L. T., Perelman, J. T., Arendt, R., Gurjar, M. G., Müller, Q., Zhang, G., Zonios, E., Kline, T., McGillican, S., Shapshay, T., Valdez, K., Badizadegan, J. M., Crawford, M., Fitzmaurice, S., Kabani, H. S., Levin, M., Seiler, R. R., Dasari, I., Itzkan, J., Van Dam, and M. S., Feld, " Detection of preinvasive cancer cells, ", Nature, 406 (6791), 35-36 (2000). bnh NATUAS 0028-0836 10.1038/35017638 (Pubitemid 30460198)
19. J. R., Mourant, M., Canpolat, C., Brocker, O., Esponda-Ramos, T., Johnson, A., Matanock, K., Stetter, and J. P., Freyer, " Light scattering from cells: the contribution of the nucleus and the effects of proliferative status, ", J. Biomed. Opt., 5 (2), 131-137 (2000). jbo JBOPFO 1083-3668 10.1117/1.429979
20. I. J., Bigio and S. G., Bown, " Spectroscopic sensing of cancer and cancer chemotherapy, current status of translational research, ", Cancer Biol. Therapy, 3 (3), 259-267 (2004). (Pubitemid 41350877)
21. R., Reif, M. S., Amorosino, K. W., Calabro, O., Aamar, S. K., Singh, and I. J., Bigio, " Analysis of changes in reflectance measurements on biological tissues subjected to different probe pressures, ", J. Biomed. Opt., 13, 010502-1-3 (2008). jbo JBOPFO 1083-3668 10.1117/1.2870115
22. Y., Zhu, T., Fearn, D., Samuel, A., Dhar, O., Hameed, S. G., Bown, and L. B., Lovat, " Error removal by orthogonal subtraction (EROS): a customized pretreatment for spectroscopic data, ", J. Chemom., 22 (2), 130-134 (2008). 8vp JOCHEU 0886-9383 10.1002/cem.1117
23. C. A., Gonzalez-Correa, B. H., Brown, R. H., Smallwood, N., Kalia, C. J., Stoddard, T. J., Stephenson, S. J., Haggie, D. N., Slater, and K. D., Bardhan, " Assessing the conditions for, in vivo, electrical virtual biopsies in Barrett's oesophagus, ", Med. Biol. Eng. Comput., 38 (4), 373-376 (2000). mbe MBECDY 0140-0118 10.1007/BF02345004 (Pubitemid 30616318)
24. C. A., Gonzalez-Correa, B. H., Brown, R. H., Smallwood, D. C., Walker, and K. D., Bardhan, " Electrical bioimpedance readings increase with higher pressure applied to the measuring probe, ", Physiol. Meas, 26 (2), S39-S47 (2005). 3nk ZZZZZZ 0967-3334 10.1088/0967-3334/26/2/004 (Pubitemid 41223600)
25. L. B., Lovat, K. S., Johnson, G. D., Mackenzie, B. R., Clark, M. R., Novelli, S., Davies, M., O'Donovan, C., Selvasekar, S. M., Thorpe, D., Pickard, R., Fitzgerald, T., Fearn, I., Bigio, and S. G., Bown, " Elastic scattering spectroscopy accurately detects high grade dysplasia and cancer in Barrett's oesophagus, ", Gut, 55 (8), 1078-1083 (2006). 4su GUTTAK 0017-5749 10.1136/gut.2005.081497 (Pubitemid 44085671)
26. T., Næs, T., Isaksson, T., Fearn, and T., Davies, A User-Friendly Guide to Multivariate Calibration and Classification, NIR Publications, Chichester, UK (2002).
27. A., Savitzky and M. J. E., Golay, " Smoothing and differentiation of data by simplified least-squares procedures, ", Anal. Chem., 36 (8), 1627-1639 (1964). anc ANCHAM 0003-2700 10.1021/ac60214a047
28. R. J., Barnes, M. S., Dhanoa, and S. J., Lister, " Standard normal variate transformation and de-trending of near-infrared diffuse reflectance spectra, ", Appl. Spectrosc., 43 (5), 772-777 (1989). aps APSPA4 0003-7028 10.1366/0003702894202201
29. D. L., Conover, B. M., Fenton, T. H., Foster, and E. L., Hull, " An evaluation of near infrared spectroscopy and cryospectrophotometry estimates of haemoglobin oxygen saturation in a rodent mammary tumour model, ", Phys. Med. Biol., 45 (9), 2685-2700 (2000). pme PHMBA7 0031-9155 10.1088/0031-9155/45/ 9/318
30. N., Shah, A. E., Cerussi, D., Jakubowski, D., Hsiang, J., Butler, and B. J., Tromberg, " The role of diffuse optical spectroscopy in the clinical management of breast cancer, ", Dis. Markers, 19 (2-3), 95-105 (2004). 47z DMARD3 0278-0240
31. R. K., Jain, " Determinants of tumor blood flow: a review, ", Cancer Res., 48 (10), 2641-2658 (1988). cnr CNREA8 0008-5472