-
1
-
-
0020362862
-
Bent helical structure in kinetoplast DNA
-
Marini, J. C., Levene, S. D., Crothers, D. M., and Englund, P. T. (1982) Bent helical structure in kinetoplast DNA. Proc. Natl. Acad. Sci. U.S.A. 79, 7664-7668.
-
(1982)
Proc. Natl. Acad. Sci. U.S.A
, vol.79
, pp. 7664-7668
-
-
Marini, J.C.1
Levene, S.D.2
Crothers, D.M.3
Englund, P.T.4
-
2
-
-
0021268779
-
The locus of sequence-directed and protein-induced DNA bending
-
Wu, H. M., and Crothers, D. M. (1984) The locus of sequence-directed and protein-induced DNA bending. Nature 308, 509-513.
-
(1984)
Nature
, vol.308
, pp. 509-513
-
-
Wu, H.M.1
Crothers, D.M.2
-
3
-
-
0032168436
-
Rod models of DNA: Sequence-dependent anisotropic elastic modelling of local bending phenomena
-
Munteanu, M. G., Vlahovicek, K., Parthasarathy, S., Simon, I., and Pongor, S. (1998) Rod models of DNA: sequence-dependent anisotropic elastic modelling of local bending phenomena. Trends Biochem. Sci. 23, 341-347.
-
(1998)
Trends Biochem. Sci
, vol.23
, pp. 341-347
-
-
Munteanu, M.G.1
Vlahovicek, K.2
Parthasarathy, S.3
Simon, I.4
Pongor, S.5
-
4
-
-
64549151992
-
Single nucleotide variants of the TGACTCA motif modulate energetics and orientation of binding of the Jun-Fos heterodimeric transcription factor
-
Seldeen, K. L., McDonald, C. B., Deegan, B. J., and Farooq, A. (2009) Single nucleotide variants of the TGACTCA motif modulate energetics and orientation of binding of the Jun-Fos heterodimeric transcription factor. Biochemistry 48, 1975-1983.
-
(2009)
Biochemistry
, vol.48
, pp. 1975-1983
-
-
Seldeen, K.L.1
McDonald, C.B.2
Deegan, B.J.3
Farooq, A.4
-
5
-
-
0035971433
-
Close encounters of many kinds: Fos-Jun interactions that mediate transcription regulatory specificity
-
Chinenov, Y., and Kerppola, T. K. (2001) Close encounters of many kinds: Fos-Jun interactions that mediate transcription regulatory specificity. Oncogene 20, 2438-2452.
-
(2001)
Oncogene
, vol.20
, pp. 2438-2452
-
-
Chinenov, Y.1
Kerppola, T.K.2
-
6
-
-
0025720735
-
The role of Jun, Fos and the AP-1 complex in cell-proliferation and transformation
-
Angel, P., and Karin, M. (1991) The role of Jun, Fos and the AP-1 complex in cell-proliferation and transformation. Biochim. Biophys. Acta 1072, 129-157.
-
(1991)
Biochim. Biophys. Acta
, vol.1072
, pp. 129-157
-
-
Angel, P.1
Karin, M.2
-
7
-
-
0023798751
-
Fos and Jun: The AP-1 connection
-
Curran, T., and Franza, B. R., Jr. (1988) Fos and Jun: the AP-1 connection. Cell 55, 395-397.
-
(1988)
Cell
, vol.55
, pp. 395-397
-
-
Curran, T.1
Franza Jr., B.R.2
-
8
-
-
0027537576
-
Interactions of coiled coils in transcription factors: Where is the specificity?
-
Baxevanis, A. D., and Vinson, C. R. (1993) Interactions of coiled coils in transcription factors: where is the specificity? Curr. Opin. Genet. Dev. 3, 278-285.
-
(1993)
Curr. Opin. Genet. Dev
, vol.3
, pp. 278-285
-
-
Baxevanis, A.D.1
Vinson, C.R.2
-
9
-
-
33744928608
-
Role of the AP-1 transcription factor c-Jun in developing, adult and injured brain
-
Raivich, G., and Behrens, A. (2006) Role of the AP-1 transcription factor c-Jun in developing, adult and injured brain. Prog. Neurobiol. 78, 347-363.
-
(2006)
Prog. Neurobiol
, vol.78
, pp. 347-363
-
-
Raivich, G.1
Behrens, A.2
-
10
-
-
27544468372
-
The Fos family of transcription factors and their role in tumourigenesis
-
Milde-Langosch, K. (2005) The Fos family of transcription factors and their role in tumourigenesis. Eur. J. Cancer 41, 2449-2461.
-
(2005)
Eur. J. Cancer
, vol.41
, pp. 2449-2461
-
-
Milde-Langosch, K.1
-
11
-
-
0035971432
-
AP-1 in mouse development and tumorigenesis
-
Jochum, W., Passegue, E., and Wagner, E. F. (2001) AP-1 in mouse development and tumorigenesis. Oncogene 20, 2401-2412.
-
(2001)
Oncogene
, vol.20
, pp. 2401-2412
-
-
Jochum, W.1
Passegue, E.2
Wagner, E.F.3
-
12
-
-
0023771685
-
c-Jun dimerizes with itself and with c-Fos, forming complexes of different DNA binding affinities
-
Halazonetis, T. D., Georgopoulos, K., Greenberg, M. E., and Leder, P. (1988) c-Jun dimerizes with itself and with c-Fos, forming complexes of different DNA binding affinities. Cell 55, 917-924.
-
(1988)
Cell
, vol.55
, pp. 917-924
-
-
Halazonetis, T.D.1
Georgopoulos, K.2
Greenberg, M.E.3
Leder, P.4
-
13
-
-
0028894384
-
Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA
-
Glover, J. N., and Harrison, S. C. (1995) Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA. Nature 373, 257-261.
-
(1995)
Nature
, vol.373
, pp. 257-261
-
-
Glover, J.N.1
Harrison, S.C.2
-
14
-
-
0000690898
-
Identification of a cyclic-AMP-responsive element within the rat somatostatin gene
-
Montminy, M. R., Sevarino, K. A., Wagner, J. A., Mandel, G., and Goodman, R. H. (1986) Identification of a cyclic-AMP-responsive element within the rat somatostatin gene. Proc. Natl. Acad. Sci. U.S.A. 83, 6682-6686.
-
(1986)
Proc. Natl. Acad. Sci. U.S.A
, vol.83
, pp. 6682-6686
-
-
Montminy, M.R.1
Sevarino, K.A.2
Wagner, J.A.3
Mandel, G.4
Goodman, R.H.5
-
15
-
-
0023791609
-
Identification of basal and cyclic AMP regulatory elements in the promoter of the phosphoenolpyruvate carboxykinase gene
-
Quinn, P. G., Wong, T. W., Magnuson, M. A., Shabb, J. B., and Granner, D. K. (1988) Identification of basal and cyclic AMP regulatory elements in the promoter of the phosphoenolpyruvate carboxykinase gene. Mol. Cell. Biol. 8, 3467-3475.
-
(1988)
Mol. Cell. Biol
, vol.8
, pp. 3467-3475
-
-
Quinn, P.G.1
Wong, T.W.2
Magnuson, M.A.3
Shabb, J.B.4
Granner, D.K.5
-
16
-
-
0026693316
-
Tissue-specific gene expression in the pituitary: The glycoprotein hormone alpha-subunit gene is regulated by a gonadotrope-specific protein
-
Horn, F., Windle, J. J., Barnhart, K. M., and Mellon, P. L. (1992) Tissue-specific gene expression in the pituitary: the glycoprotein hormone alpha-subunit gene is regulated by a gonadotrope-specific protein. Mol. Cell. Biol. 12, 2143-2153.
-
(1992)
Mol. Cell. Biol
, vol.12
, pp. 2143-2153
-
-
Horn, F.1
Windle, J.J.2
Barnhart, K.M.3
Mellon, P.L.4
-
17
-
-
0027390602
-
A novel interferon-inducible domain: Structural and functional analysis of the human interferon regulatory factor 1 gene promoter
-
Sims, S. H., Cha, Y., Romine, M. F., Gao, P. Q., Gottlieb, K., and Deisseroth, A. B. (1993) A novel interferon-inducible domain: structural and functional analysis of the human interferon regulatory factor 1 gene promoter. Mol. Cell. Biol. 13, 690-702.
-
(1993)
Mol. Cell. Biol
, vol.13
, pp. 690-702
-
-
Sims, S.H.1
Cha, Y.2
Romine, M.F.3
Gao, P.Q.4
Gottlieb, K.5
Deisseroth, A.B.6
-
18
-
-
0028087786
-
Non-AP-1 tumor promoter 12-O-tetradecanoylphorbol-13-acetate-responsive sequences in the human ornithine decarboxylase gene
-
Kim, Y. J., Pan, H., and Verma, A. K. (1994) Non-AP-1 tumor promoter 12-O-tetradecanoylphorbol-13-acetate-responsive sequences in the human ornithine decarboxylase gene. Mol. Carcinog. 10, 169-179.
-
(1994)
Mol. Carcinog
, vol.10
, pp. 169-179
-
-
Kim, Y.J.1
Pan, H.2
Verma, A.K.3
-
19
-
-
0028575441
-
Differential effects of monoclonal antibodies on activating transcription factor-1 and cAMP response element binding protein interactions with DNA
-
Orten, D. J., Strawhecker, J. M., Sanderson, S. D., Huang, D., Prystowsky, M. B., and Hinrichs, S. H. (1994) Differential effects of monoclonal antibodies on activating transcription factor-1 and cAMP response element binding protein interactions with DNA. J. Biol. Chem. 269, 32254-32263.
-
(1994)
J. Biol. Chem
, vol.269
, pp. 32254-32263
-
-
Orten, D.J.1
Strawhecker, J.M.2
Sanderson, S.D.3
Huang, D.4
Prystowsky, M.B.5
Hinrichs, S.H.6
-
20
-
-
0029041892
-
Characterization of promoter elements required for cell-specific expression of the neurotensin/ neuromedin N gene in a human endocrine cell line
-
Evers, B. M., Wang, X., Zhou, Z., Townsend, C. M., Jr., McNeil, G. P., and Dobner, P. R. (1995) Characterization of promoter elements required for cell-specific expression of the neurotensin/ neuromedin N gene in a human endocrine cell line. Mol. Cell. Biol. 15, 3870-3881.
-
(1995)
Mol. Cell. Biol
, vol.15
, pp. 3870-3881
-
-
Evers, B.M.1
Wang, X.2
Zhou, Z.3
Townsend Jr., C.M.4
McNeil, G.P.5
Dobner, P.R.6
-
21
-
-
0028846951
-
Multiple promoters regulate tissue-specific expression of the human NPY-Y1 receptor gene
-
Ball, H. J., Shine, J., and Herzog, H. (1995) Multiple promoters regulate tissue-specific expression of the human NPY-Y1 receptor gene. J. Biol. Chem. 270, 27272-27276.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 27272-27276
-
-
Ball, H.J.1
Shine, J.2
Herzog, H.3
-
22
-
-
0030472180
-
Transcriptional control of circadian hormone synthesis via the CREMfeedback loop
-
Foulkes, N. S., Borjigin, J., Snyder, S. H., and Sassone-Corsi, P. (1996) Transcriptional control of circadian hormone synthesis via the CREMfeedback loop. Proc. Natl. Acad. Sci. U.S.A. 93, 14140-14145.
-
(1996)
Proc. Natl. Acad. Sci. U.S.A
, vol.93
, pp. 14140-14145
-
-
Foulkes, N.S.1
Borjigin, J.2
Snyder, S.H.3
Sassone-Corsi, P.4
-
23
-
-
0030699927
-
ATF1 and CREB trans-activate a cell cycle regulated histone H4 gene at a distal nuclear matrix associated promoter element
-
Guo, B., Stein, J. L., van Wijnen, A. J., and Stein, G. S. (1997) ATF1 and CREB trans-activate a cell cycle regulated histone H4 gene at a distal nuclear matrix associated promoter element. Biochemistry 36, 14447-14455.
-
(1997)
Biochemistry
, vol.36
, pp. 14447-14455
-
-
Guo, B.1
Stein, J.L.2
van Wijnen, A.J.3
Stein, G.S.4
-
24
-
-
0033613085
-
Estrogen induction of the cyclin D1 promoter: Involvement of a cAMP response-like element
-
Sabbah, M., Courilleau, D., Mester, J., and Redeuilh, G. (1999) Estrogen induction of the cyclin D1 promoter: involvement of a cAMP response-like element. Proc. Natl. Acad. Sci. U.S.A. 96, 11217-11222.
-
(1999)
Proc. Natl. Acad. Sci. U.S.A
, vol.96
, pp. 11217-11222
-
-
Sabbah, M.1
Courilleau, D.2
Mester, J.3
Redeuilh, G.4
-
25
-
-
0033601328
-
Transcriptional activation of the human manganese superoxide dismutase gene mediated by tetradecanoylphorbol acetate
-
Kim, H. P., Roe, J. H., Chock, P. B., and Yim, M. B. (1999) Transcriptional activation of the human manganese superoxide dismutase gene mediated by tetradecanoylphorbol acetate. J. Biol. Chem. 274, 37455-37460.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 37455-37460
-
-
Kim, H.P.1
Roe, J.H.2
Chock, P.B.3
Yim, M.B.4
-
26
-
-
0033032092
-
Transcriptional regulation of the interleukin-6 gene in mesangial cells
-
Grassl, C., Luckow, B., Schlondorff, D., and Dendorfer, U. (1999) Transcriptional regulation of the interleukin-6 gene in mesangial cells. J. Am. Soc. Nephrol. 10, 1466-1477.
-
(1999)
J. Am. Soc. Nephrol
, vol.10
, pp. 1466-1477
-
-
Grassl, C.1
Luckow, B.2
Schlondorff, D.3
Dendorfer, U.4
-
27
-
-
0034702882
-
Functional AP1 and CRE response elements in the human keratinocyte transglutaminase promoter mediating Whn suppression
-
Jessen, B. A., Qin, Q., and Rice, R. H. (2000) Functional AP1 and CRE response elements in the human keratinocyte transglutaminase promoter mediating Whn suppression. Gene 254, 77-85.
-
(2000)
Gene
, vol.254
, pp. 77-85
-
-
Jessen, B.A.1
Qin, Q.2
Rice, R.H.3
-
28
-
-
0033621962
-
17beta-estradiol inhibits apoptosis in MCF-7 cells, inducing bcl-2 expression via two estrogen-responsive elements present in the coding sequence
-
Perillo, B., Sasso, A., Abbondanza, C., and Palumbo, G. (2000) 17beta-estradiol inhibits apoptosis in MCF-7 cells, inducing bcl-2 expression via two estrogen-responsive elements present in the coding sequence. Mol. Cell. Biol. 20, 2890-2901.
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 2890-2901
-
-
Perillo, B.1
Sasso, A.2
Abbondanza, C.3
Palumbo, G.4
-
29
-
-
0034917627
-
Transcriptional regulation of the humanGnRHII gene is mediated by a putative cAMP response element
-
Chen, A., Laskar-Levy, O., Ben-Aroya, N., and Koch, Y. (2001) Transcriptional regulation of the humanGnRHII gene is mediated by a putative cAMP response element. Endocrinology 142, 3483-3492.
-
(2001)
Endocrinology
, vol.142
, pp. 3483-3492
-
-
Chen, A.1
Laskar-Levy, O.2
Ben-Aroya, N.3
Koch, Y.4
-
30
-
-
0035795633
-
Identification of a novel DNA regulatory element in the rabbit surfactant protein B (SP-B) promoter that is a target for ATF/CREB and AP-1 transcription factors
-
Berhane, K., and Boggaram, V. (2001) Identification of a novel DNA regulatory element in the rabbit surfactant protein B (SP-B) promoter that is a target for ATF/CREB and AP-1 transcription factors. Gene 268, 141-151.
-
(2001)
Gene
, vol.268
, pp. 141-151
-
-
Berhane, K.1
Boggaram, V.2
-
31
-
-
2442629605
-
Identification of a novel cyclic AMP-response element (CRE-II) and the role of CREB-1 in the cAMP-induced expression of the survival motor neuron (SMN) gene
-
Majumder, S., Varadharaj, S., Ghoshal, K., Monani, U., Burghes, A. H., and Jacob, S. T. (2004) Identification of a novel cyclic AMP-response element (CRE-II) and the role of CREB-1 in the cAMP-induced expression of the survival motor neuron (SMN) gene. J. Biol. Chem. 279, 14803-14811.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 14803-14811
-
-
Majumder, S.1
Varadharaj, S.2
Ghoshal, K.3
Monani, U.4
Burghes, A.H.5
Jacob, S.T.6
-
32
-
-
14544298906
-
Dexamethasone represses cAMP rapid upregulation of TRH gene transcription: Identification of a composite glucocorticoid response element and a cAMP response element in TRH promoter
-
Cote-Velez, A., Perez-Martinez, L., Diaz-Gallardo, M. Y., Perez-Monter, C., Carreon-Rodriguez, A., Charli, J. L., and Joseph-Bravo, P. (2005) Dexamethasone represses cAMP rapid upregulation of TRH gene transcription: identification of a composite glucocorticoid response element and a cAMP response element in TRH promoter. J. Mol. Endocrinol. 34, 177-197.
-
(2005)
J. Mol. Endocrinol
, vol.34
, pp. 177-197
-
-
Cote-Velez, A.1
Perez-Martinez, L.2
Diaz-Gallardo, M.Y.3
Perez-Monter, C.4
Carreon-Rodriguez, A.5
Charli, J.L.6
Joseph-Bravo, P.7
-
33
-
-
21744460229
-
Potential role of cAMP response element-binding protein in ethanol-induced N-methyl-D-aspartate receptor 2B subunit gene transcription in fetal mouse cortical cells
-
Rani, C. S., Qiang, M., and Ticku, M. K. (2005) Potential role of cAMP response element-binding protein in ethanol-induced N-methyl-D-aspartate receptor 2B subunit gene transcription in fetal mouse cortical cells. Mol. Pharmacol. 67, 2126-2136.
-
(2005)
Mol. Pharmacol
, vol.67
, pp. 2126-2136
-
-
Rani, C.S.1
Qiang, M.2
Ticku, M.K.3
-
34
-
-
33745767294
-
Cooperative cell transformation by Myc/Mil(Raf) involves induction of AP-1 and activation of genes implicated in cell motility and metastasis
-
Hartl, M., Karagiannidis, A. I., and Bister, K. (2006) Cooperative cell transformation by Myc/Mil(Raf) involves induction of AP-1 and activation of genes implicated in cell motility and metastasis. Oncogene 25, 4043-4055.
-
(2006)
Oncogene
, vol.25
, pp. 4043-4055
-
-
Hartl, M.1
Karagiannidis, A.I.2
Bister, K.3
-
35
-
-
33947194762
-
PTHrP P3 promoter activity in breast cancer cell lines: Role of Ets1 and CBP (CREB binding protein)
-
Hamzaoui, H., Rizk-Rabin, M., Gordon, J., Offutt, C., Bertherat, J., and Bouizar, Z. (2007) PTHrP P3 promoter activity in breast cancer cell lines: role of Ets1 and CBP (CREB binding protein). Mol. Cell. Endocrinol. 268, 75-84.
-
(2007)
Mol. Cell. Endocrinol
, vol.268
, pp. 75-84
-
-
Hamzaoui, H.1
Rizk-Rabin, M.2
Gordon, J.3
Offutt, C.4
Bertherat, J.5
Bouizar, Z.6
-
36
-
-
61849127776
-
Transcription of the protein kinase C-delta gene is activated by JNK through c-Jun and ATF2 in response to the anticancer agent doxorubicin
-
Min, B. W., Kim, C. G., Ko, J., Lim, Y., Lee, Y. H., and Shin, S. Y. (2008) Transcription of the protein kinase C-delta gene is activated by JNK through c-Jun and ATF2 in response to the anticancer agent doxorubicin. Exp. Mol. Med. 40, 699-708.
-
(2008)
Exp. Mol. Med
, vol.40
, pp. 699-708
-
-
Min, B.W.1
Kim, C.G.2
Ko, J.3
Lim, Y.4
Lee, Y.H.5
Shin, S.Y.6
-
37
-
-
41849127412
-
Coupling of folding and DNA-binding in the bZIP domains of Jun-Fos heterodimeric transcription factor
-
Seldeen, K. L., McDonald, C. B., Deegan, B. J., and Farooq, A. (2008) Coupling of folding and DNA-binding in the bZIP domains of Jun-Fos heterodimeric transcription factor. Arch. Biochem. Biophys. 473, 48-60.
-
(2008)
Arch. Biochem. Biophys
, vol.473
, pp. 48-60
-
-
Seldeen, K.L.1
McDonald, C.B.2
Deegan, B.J.3
Farooq, A.4
-
38
-
-
0014725117
-
Oligonucleotide interactions. 3. Circular dichroism studies of the conformation of deoxyoligonucleotides
-
Cantor, C. R., Warshaw, M. M., and Shapiro, H. (1970) Oligonucleotide interactions. 3. Circular dichroism studies of the conformation of deoxyoligonucleotides. Biopolymers 9, 1059-1077.
-
(1970)
Biopolymers
, vol.9
, pp. 1059-1077
-
-
Cantor, C.R.1
Warshaw, M.M.2
Shapiro, H.3
-
39
-
-
0034832456
-
Determination of binding constant of transcription factor AP-1 and DNA. Application of inhibitors
-
Kwon, H., Park, S., Lee, S., Lee, D. K., and Yang, C. H. (2001) Determination of binding constant of transcription factor AP-1 and DNA. Application of inhibitors. Eur. J. Biochem. 268, 565-572.
-
(2001)
Eur. J. Biochem
, vol.268
, pp. 565-572
-
-
Kwon, H.1
Park, S.2
Lee, S.3
Lee, D.K.4
Yang, C.H.5
-
40
-
-
0025829599
-
c-JUN, JUN B, and JUNDdiffer in their binding affinities to AP-1 and CRE consensus sequences: Effect of FOS proteins
-
Ryseck, R. P., and Bravo,R. (1991) c-JUN, JUN B, and JUNDdiffer in their binding affinities to AP-1 and CRE consensus sequences: effect of FOS proteins. Oncogene 6, 533-542.
-
(1991)
Oncogene
, vol.6
, pp. 533-542
-
-
Ryseck, R.P.1
Bravo, R.2
-
41
-
-
0024797655
-
The basic region of Fos mediates specific DNA binding
-
Nakabeppu, Y., and Nathans, D. (1989) The basic region of Fos mediates specific DNA binding. EMBO J. 8, 3833-3841.
-
(1989)
EMBO J
, vol.8
, pp. 3833-3841
-
-
Nakabeppu, Y.1
Nathans, D.2
-
42
-
-
0024201551
-
Genes Dev. 2
-
Rauscher, F. J., III, Voulalas, P. J., Franza, B. R., Jr., and Curran, T. (1988) Fos and Jun bind cooperatively to the AP-1 site: reconstitution in vitro. Genes Dev. 2, 1687-1699.
-
(1988)
, pp. 1687-1699
-
-
Rauscher III, F.J.1
Voulalas, P.J.2
Franza Jr., B.R.3
Curran, T.4
-
43
-
-
0032549490
-
Diffusion-controlled DNA recognition by an unfolded, monomeric bZIP transcription factor
-
Berger, C., Piubelli, L., Haditsch, U., and Bosshard, H. R. (1998) Diffusion-controlled DNA recognition by an unfolded, monomeric bZIP transcription factor. FEBS Lett. 425, 14-18.
-
(1998)
FEBS Lett
, vol.425
, pp. 14-18
-
-
Berger, C.1
Piubelli, L.2
Haditsch, U.3
Bosshard, H.R.4
-
44
-
-
3042579602
-
How do site-specific DNA-binding proteins find their targets?
-
Halford, S. E., and Marko, J. F. (2004) How do site-specific DNA-binding proteins find their targets? Nucleic Acids Res. 32, 3040-3052.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 3040-3052
-
-
Halford, S.E.1
Marko, J.F.2
-
45
-
-
14544293651
-
Structural basis of eukaryotic gene transcription
-
Boeger, H., Bushnell, D. A., Davis, R., Griesenbeck, J., Lorch, Y., Strattan, J. S.,Westover, K. D., and Kornberg, R. D. (2005) Structural basis of eukaryotic gene transcription. FEBS Lett. 579, 899-903.
-
(2005)
FEBS Lett
, vol.579
, pp. 899-903
-
-
Boeger, H.1
Bushnell, D.A.2
Davis, R.3
Griesenbeck, J.4
Lorch, Y.5
Strattan, J.S.6
Westover, K.D.7
Kornberg, R.D.8
-
46
-
-
32644489284
-
Facilitated diffusion of DNA-binding proteins
-
Klenin, K. V., Merlitz, H., Langowski, J., and Wu, C. X. (2006) Facilitated diffusion of DNA-binding proteins. Phys. Rev. Lett. 96, 018104.
-
(2006)
Phys. Rev. Lett
, vol.96
, pp. 018104
-
-
Klenin, K.V.1
Merlitz, H.2
Langowski, J.3
Wu, C.X.4
-
47
-
-
0014722597
-
Enthalpy-entropy compensation phenomena in water solutions of proteins and small molecules: A ubiquitous property of water
-
Lumry, R., and Rajender, S. (1970) Enthalpy-entropy compensation phenomena in water solutions of proteins and small molecules: a ubiquitous property of water. Biopolymers 9, 1125-1227.
-
(1970)
Biopolymers
, vol.9
, pp. 1125-1227
-
-
Lumry, R.1
Rajender, S.2
-
48
-
-
0021093448
-
Enthalpyentropy compensation and heat capacity changes for protein-ligand interactions: General thermodynamic models and data for the binding of nucleotides to ribonuclease A
-
Eftink, M. R., Anusiem, A. C., and Biltonen, R. L. (1983) Enthalpyentropy compensation and heat capacity changes for protein-ligand interactions: general thermodynamic models and data for the binding of nucleotides to ribonuclease A. Biochemistry 22, 3884-3896.
-
(1983)
Biochemistry
, vol.22
, pp. 3884-3896
-
-
Eftink, M.R.1
Anusiem, A.C.2
Biltonen, R.L.3
-
49
-
-
0035965868
-
Heat does not come in different colours: Entropy-enthalpy compensation, free energy windows, quantum confinement, pressure perturbation calorimetry, solvation and the multiple causes of heat capacity effects in biomolecular interactions
-
Cooper, A., Johnson, C. M., Lakey, J. H., and Nollmann, M. (2001) Heat does not come in different colours: entropy-enthalpy compensation, free energy windows, quantum confinement, pressure perturbation calorimetry, solvation and the multiple causes of heat capacity effects in biomolecular interactions. Biophys. Chem. 93, 215-230.
-
(2001)
Biophys. Chem
, vol.93
, pp. 215-230
-
-
Cooper, A.1
Johnson, C.M.2
Lakey, J.H.3
Nollmann, M.4
-
50
-
-
0035107447
-
Entropy-enthalpy compensation: Fact or artifact?
-
Sharp, K. (2001) Entropy-enthalpy compensation: fact or artifact? Protein Sci. 10, 661-667.
-
(2001)
Protein Sci
, vol.10
, pp. 661-667
-
-
Sharp, K.1
-
51
-
-
38349135426
-
Enthalpy-entropy compensation: A phantom or something useful?
-
Starikov, E. B., andNorden, B. (2007) Enthalpy-entropy compensation: a phantom or something useful? J. Phys. Chem. B 111, 14431-14435.
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 14431-14435
-
-
Starikov, E.B.1
andNorden, B.2
-
52
-
-
0030478012
-
Coupled folding and site-specific binding of the GCN4-bZIP transcription factor to the AP-1 and ATF/CREB DNA sites studied by microcalorimetry
-
Berger, C., Jelesarov, I., and Bosshard, H. R. (1996) Coupled folding and site-specific binding of the GCN4-bZIP transcription factor to the AP-1 and ATF/CREB DNA sites studied by microcalorimetry. Biochemistry 35, 14984-14991.
-
(1996)
Biochemistry
, vol.35
, pp. 14984-14991
-
-
Berger, C.1
Jelesarov, I.2
Bosshard, H.R.3
-
53
-
-
0028283502
-
A thermodynamic study of the trp repressor-operator interaction
-
Ladbury, J. E., Wright, J. G., Sturtevant, J. M., and Sigler, P. B. (1994) A thermodynamic study of the trp repressor-operator interaction. J. Mol. Biol. 238, 669-681.
-
(1994)
J. Mol. Biol
, vol.238
, pp. 669-681
-
-
Ladbury, J.E.1
Wright, J.G.2
Sturtevant, J.M.3
Sigler, P.B.4
-
54
-
-
0028016323
-
Cold denaturation of a repressor-operator complex: The role of entropy in protein-DNA recognition
-
Foguel, D., and Silva, J. L. (1994) Cold denaturation of a repressor-operator complex: the role of entropy in protein-DNA recognition. Proc. Natl. Acad. Sci. U.S.A. 91, 8244-8247.
-
(1994)
Proc. Natl. Acad. Sci. U.S.A
, vol.91
, pp. 8244-8247
-
-
Foguel, D.1
Silva, J.L.2
-
55
-
-
0029080688
-
Thermodynamic and kinetic characterization of the binding of the TATA binding protein to the adenovirus E4 promoter
-
Petri, V., Hsieh, M., and Brenowitz, M. (1995) Thermodynamic and kinetic characterization of the binding of the TATA binding protein to the adenovirus E4 promoter. Biochemistry 34, 9977-9984.
-
(1995)
Biochemistry
, vol.34
, pp. 9977-9984
-
-
Petri, V.1
Hsieh, M.2
Brenowitz, M.3
-
56
-
-
0029044394
-
Calorimetric analysis of lambda cI repressor binding to DNA operator sites
-
Merabet, E., and Ackers, G. K. (1995) Calorimetric analysis of lambda cI repressor binding to DNA operator sites. Biochemistry 34, 8554-8563.
-
(1995)
Biochemistry
, vol.34
, pp. 8554-8563
-
-
Merabet, E.1
Ackers, G.K.2
-
57
-
-
11844276979
-
Enthalpic and entropic effects of salt and polyol osmolytes on site-specific protein-DNA association: The integrase Tn916-DNA complex
-
Milev, S., Bosshard, H. R., and Jelesarov, I. (2005) Enthalpic and entropic effects of salt and polyol osmolytes on site-specific protein-DNA association: the integrase Tn916-DNA complex. Biochemistry 44, 285-293.
-
(2005)
Biochemistry
, vol.44
, pp. 285-293
-
-
Milev, S.1
Bosshard, H.R.2
Jelesarov, I.3
-
58
-
-
0022477409
-
DNA bending at adenine. thymine tracts
-
Koo, H. S., Wu, H. M., and Crothers, D. M. (1986) DNA bending at adenine. thymine tracts. Nature 320, 501-506.
-
(1986)
Nature
, vol.320
, pp. 501-506
-
-
Koo, H.S.1
Wu, H.M.2
Crothers, D.M.3
-
59
-
-
0023164663
-
Poly-(dA)·poly(dT) is a B-type double helix with a distinctively narrow minor groove
-
Alexeev, D. G., Lipanov, A. A., and Skuratovskii, I. (1987) Poly-(dA)·poly(dT) is a B-type double helix with a distinctively narrow minor groove. Nature 325, 821-823.
-
(1987)
Nature
, vol.325
, pp. 821-823
-
-
Alexeev, D.G.1
Lipanov, A.A.2
Skuratovskii, I.3
-
60
-
-
0021112250
-
Heteronomous DNA
-
Arnott, S., Chandrasekaran, R., Hall, I. H., and Puigjaner, L. C. (1983) Heteronomous DNA. Nucleic Acids Res. 11, 4141-4155.
-
(1983)
Nucleic Acids Res
, vol.11
, pp. 4141-4155
-
-
Arnott, S.1
Chandrasekaran, R.2
Hall, I.H.3
Puigjaner, L.C.4
-
61
-
-
0023513912
-
The structure of an oligo(dA)·oligo(dT) tract and its biological implications
-
Nelson, H. C., Finch, J. T., Luisi, B. F., and Klug, A. (1987) The structure of an oligo(dA)·oligo(dT) tract and its biological implications. Nature 330, 221-226.
-
(1987)
Nature
, vol.330
, pp. 221-226
-
-
Nelson, H.C.1
Finch, J.T.2
Luisi, B.F.3
Klug, A.4
-
62
-
-
0023494886
-
A bifurcated hydrogen-bonded conformation in the d(A·T) base pairs of the DNA dodecamer d(CGCAAATTTGCG) and its complex with distamycin
-
Coll, M., Frederick, C. A., Wang, A. H., and Rich, A. (1987) A bifurcated hydrogen-bonded conformation in the d(A·T) base pairs of the DNA dodecamer d(CGCAAATTTGCG) and its complex with distamycin. Proc. Natl. Acad. Sci. U.S.A. 84, 8385-8389.
-
(1987)
Proc. Natl. Acad. Sci. U.S.A
, vol.84
, pp. 8385-8389
-
-
Coll, M.1
Frederick, C.A.2
Wang, A.H.3
Rich, A.4
-
63
-
-
0008123541
-
Crystal lattice packing is important in determining the bend of a DNA dodecamer containing an adenine tract
-
DiGabriele, A. D., Sanderson, M. R., and Steitz, T. A. (1989) Crystal lattice packing is important in determining the bend of a DNA dodecamer containing an adenine tract. Proc. Natl. Acad. Sci. U.S.A. 86, 1816-1820.
-
(1989)
Proc. Natl. Acad. Sci. U.S.A
, vol.86
, pp. 1816-1820
-
-
DiGabriele, A.D.1
Sanderson, M.R.2
Steitz, T.A.3
-
64
-
-
0027317478
-
Selective DNA bending by a variety of bZIP proteins
-
Kerppola, T. K., and Curran, T. (1993) Selective DNA bending by a variety of bZIP proteins. Mol. Cell. Biol. 13, 5479-5489.
-
(1993)
Mol. Cell. Biol
, vol.13
, pp. 5479-5489
-
-
Kerppola, T.K.1
Curran, T.2
-
65
-
-
0030946251
-
Structural basis of DNA bending and oriented heterodimer binding by the basic leucine zipper domains of Fos and Jun
-
Leonard, D. A., Rajaram, N., and Kerppola, T. K. (1997) Structural basis of DNA bending and oriented heterodimer binding by the basic leucine zipper domains of Fos and Jun. Proc. Natl. Acad. Sci. U.S.A. 94, 4913-4918.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A
, vol.94
, pp. 4913-4918
-
-
Leonard, D.A.1
Rajaram, N.2
Kerppola, T.K.3
-
66
-
-
0031671212
-
DNAbending determines Fos-Jun heterodimer orientation
-
Leonard, D. A., and Kerppola, T. K. (1998)DNAbending determines Fos-Jun heterodimer orientation. Nat. Struct. Biol. 5, 877-881.
-
(1998)
Nat. Struct. Biol
, vol.5
, pp. 877-881
-
-
Leonard, D.A.1
Kerppola, T.K.2
-
67
-
-
0036664805
-
DNA polymorphisms in potential regulatory elements of the CFTR gene alter transcription factor binding
-
Rowntree, R., and Harris, A. (2002) DNA polymorphisms in potential regulatory elements of the CFTR gene alter transcription factor binding. Hum. Genet. 111, 66-74.
-
(2002)
Hum. Genet
, vol.111
, pp. 66-74
-
-
Rowntree, R.1
Harris, A.2
-
68
-
-
0024356301
-
Rapid measurement of binding constants and heats of binding using a new titration calorimeter
-
Wiseman, T., Williston, S., Brandts, J. F., and Lin, L. N. (1989) Rapid measurement of binding constants and heats of binding using a new titration calorimeter. Anal. Biochem. 179, 131-137.
-
(1989)
Anal. Biochem
, vol.179
, pp. 131-137
-
-
Wiseman, T.1
Williston, S.2
Brandts, J.F.3
Lin, L.N.4
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