Evaluating the informatics for integrating biology and the bedside system for clinical research

BMC Medical Research Methodology

Volumn 9, Issue 1, 2009, Pages

  Deshmukh, Vikrant G ^a,b   Meystre, Stéphane M ^a   Mitchell, Joyce A ^a  

^a UNIVERSITY OF UTAH SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF UTAH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOLOGY; CLINICAL EVALUATION; CLINICAL RESEARCH; EVALUATION RESEARCH; HUMAN; INFORMATION PROCESSING; INFORMATION SCIENCE; MEDICAL PRACTICE; EVALUATION; HOSPITAL INFORMATION SYSTEM; INFORMATION RETRIEVAL; MEDICAL INFORMATICS; MEDICAL RECORD; MEDICAL RESEARCH; NOMENCLATURE; ORGANIZATION AND MANAGEMENT; PATIENT SELECTION; TECHNOLOGY;

BIOMEDICAL RESEARCH; ELECTRONIC HEALTH RECORDS; HUMANS; INFORMATION STORAGE AND RETRIEVAL; MEDICAL INFORMATICS APPLICATIONS; PATIENT SELECTION; POINT-OF-CARE SYSTEMS; TECHNOLOGY TRANSFER; TERMINOLOGY AS TOPIC;

EID: 72949105417     PISSN: None     EISSN: 14712288     Source Type: Journal    
DOI: 10.1186/1471-2288-9-70     Document Type: Article

References (35)

1. US biomedical research: basic, translational, and clinical sciences. EA Zerhouni, JAMA 2005 294 1352 1358 10.1001/jama.294.11.1352 16174693
2. Clinical research at a crossroads: the NIH roadmap. EA Zerhouni, J Investig Med 2006 54 171 173 10.2310/6650.2006.X0016 17152855
3. Translational and clinical science - time for a new vision. EA Zerhouni, N Engl J Med 2005 353 1621 1623 10.1056/NEJMsb053723 16221788
4. Translational Bioinformatics: Coming of Age. AJ Butte, J Am Med Inform Assoc 2008 15 709 714 10.1197/jamia.M2824 18755990
5. Informatics for Integrating Biology and the Bedside. 2008 https://www.i2b2.org 6-1-2008.
6. Architecture of the open-source clinical research chart from Informatics for Integrating Biology and the Bedside. SN Murphy M Mendis K Hackett R Kuttan W Pan LC Phillips, et al. AMIA Annu Symp Proc 2007 548 552 18693896
7. Java. 2009 http://www.java.com/en/
8. Service-oriented computing. MP Papazoglou D Georgakopoulos, Communications of the Acm 2003 46 25 28 10.1145/944217.944233
9. Service-oriented computing: State of the art and research challenges. MP Papazoglou P Traverso S Dustdar F Leymann, Computer 2007 40 38 10.1109/MC.2007.400
10. Principled design of the modern Web architecture. RT Fielding RN Taylor, 2000 407 416
11. Simple Object Access Protocol (SOAP) 1.1. World Wide Web Consortium. D Box D Ehnebuske G Kakivaya A Layman N Mendelson HF Nielson, et al. 2009 http://www.w3.org/TR/2000/NOTE-SOAP-20000508/
12. Calculating the benefits of a Research Patient Data Repository. R Nalichowski D Keogh HC Chueh SN Murphy, AMIA Annu Symp Proc 2006 1044 17238663
13. Visual query tool for finding patent cohorts from a clinical data warehouse of the Partners HealthCare System. SN Murphy GO Barnett HC Chueh, J Am Med Inform Assoc 2000 1174
14. Visual query tool for integrating clinical and genetic data in the Partners Healthcare System. SN Murphy HC Chueh, J Am Med Inform Assoc 2001 983
15. History of medical informatics at Utah. HR Warner, New York: ACM, Blum BI, Duncan K, 1990 357 366
16. Medical informatics education: the University of Utah experience. GA Patton RM Gardner, J Am Med Inform Assoc 1999 6 457 465 10579604
17. Apache Tomcat. 2009 http://projects.apache.org/projects/tomcat.html
18. The JBoss Application Server. 2009 http://www.jboss.org/jbossas/
19. Apache Axis2. 2009 http://ws.apache.org/axis2/
20. GridSphere Portal Framework. 2009 http://www.gridsphere.org/
21. Oracle Express Edition. 2009 http://www.oracle.com/technology/products/ database/xe/index.html
22. Linux Online: About Linux. 2009 http://www.linux.org/info/
23. Red Hat Enterprise Linux. 2009 http://www.redhat.com/rhel/
24. AMD Opteron Processors for Servers. 2009 http://www.amd.com/us/products/ server/Pages/server.aspx
25. HP OpenView. 2009 http://www.managementsoftware.hp.com/
26. International Classification of Diseases, Ninth Revision, Clinical Modifications (ICD-9-CM). 2009 http://www.cdc.gov/nchs/about/otheract/icd9/ abticd9.htm
27. The Multum Lexicon. 2009 http://www.multum.com/Lexicon.htm
28. The National Drug Code Directory. 2009 http://www.fda.gov/cder/ndc/
29. Logical Observations Identifiers Names and Codes. 2009 http://loinc.org/
30. MediSpan Drug Databases. 2009 http://www.medispan.com/drug-database.aspx
31. A computerized family history data base system. M Skolnick LL Bean SM Dintelman G Mineau, Sociol Soc Res 1979 63 506 523
32. Extracolonic cancers associated with hereditary nonpolyposis colorectal cancer in the Utah population database. JS Maul NR Warner SK Kuwada RW Burt LA Cannon-Albright, American Journal of Gastroenterology 2006 101 1591 1596 10.1111/j.1572-0241.2006.00636.x 16863565
33. Familial mortality in the Utah population database: Characterizing a human aging phenotype. E O'Brien R Kerber K Smith G Mineau K Boucher DL Reed, Journals of Gerontology Series A-Biological Sciences and Medical Sciences 2007 62 803 812
34. Apache Ant. 2009 http://ant.apache.org/
35. VMWare. 2009 http://www.vmware.com/