Contamination of soil by copper affects the dynamics, diversity, and activity of soil bacterial communities involved in wheat decomposition and carbon storage

Applied and Environmental Microbiology

Volumn 75, Issue 23, 2009, Pages 7565-7569

  Bernard, L ^a,e   Maron, P A ^a   Mougel, C ^a   Nowak, V ^a   Leveque J ^b   Marol, C ^c   Balesdent, J ^d   Gibiat, F ^c   Ranjard, L ^a  

^a UNIVERSITÉ DE BOURGOGNE   (France)

^b UNIVERSITÉ DE BOURGOGNE   (France)

^c IRFM   (France)

^d CEMAGREF   (France)

^e INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; COPPER;

BACTERIAL COMMUNITY; BACTERIAL POPULATION; COPPER CONTAMINATION; FUNCTIONAL MODIFICATION; RESIDUE DECOMPOSITION; SOIL BACTERIAL COMMUNITY; SOIL ORGANIC MATTER MINERALIZATIONS; STABLE-ISOTOPE PROBING;

SOILS;

CARBON DIOXIDE; COPPER; SOIL ORGANIC MATTER;

BACTERIUM; CARBON SEQUESTRATION; COPPER; DECOMPOSITION; MINERALIZATION; POPULATION DYNAMICS; SOIL MICROORGANISM; SOIL ORGANIC MATTER; SOIL POLLUTION; SPECIES DIVERSITY; STABLE ISOTOPE; WHEAT;

ARTICLE; CARBON DIOXIDE EXCRETION; CARBON STORAGE; COMMUNITY DYNAMICS; CONTROLLED STUDY; DECOMPOSITION; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; MICROBIAL DIVERSITY; MICROCOSM; MINERALIZATION; MOLECULAR PROBE; NONHUMAN; SOIL; SOIL POLLUTION; STIMULATION; WHEAT;

BACTERIA (MICROORGANISMS); TRITICUM AESTIVUM;

EID: 72949099287     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00616-09     Document Type: Article

References (15)

1. Bernard, L., C. Mougel, P. A. Maron, V. Nowak, J. Lévêque, C. Henault, F. Z. Haichar, O. Berge, C. Marol, J. Balesdent, F. Gibiat, P. Lemanceau, and L. Ranjard. 2007. Dynamics and identification of soil microbial populations actively assimilating carbon from 13C-labelled wheat residue as estimated by DNA- and RNA-SIP techniques. Environ. Microbiol. 9:752-764.
2. Fontaine, S., A. Mariotti, and L. Abbadie. 2003. The priming effect of organic matter: a question of microbial competition? Soil Biol. Biochem. 35:837-843. (Pubitemid 36708244)
3. Giller, K. E., E. Witler, and S. P. McGrath. 1998. Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol. Biochem. 30:1389-1414.
4. Gremion, F., A. Chatzinotas, and H. Harms. 2003. Comparative 16S rDNA and rRNA sequence analysis indicates that Actinobacteria might be a dominant part of the metabolically active bacteria in heavy metal-contaminated bulk and rhizosphere soil. Environ. Microbiol. 5:896-907.
5. Hui, L. I., Y. Zhang, I. Kravchenko., X. U. Hui, and C. Zhang. 2006. Dynamics changes in microbial activity and community structure during biodegradation of petroleum compounds: a laboratory experiment. J. Environ. Sci. 19:1003-1013.
6. Kuzyakov, Y., J. K. Friedel, and K. Stahr. 2000. Review of mechanisms and quantification of priming effect. Soil Biol. Biochem. 32:1485-1498.
7. Lejon, D. P. H., J. Lévêque, J. Martins, L. Spadini, N. Pascault, D. Landry, M. J. Milloux, V. Nowak, R. Chaussod, and L. Ranjard. 2008. Copper dynamics and impact on microbial communities according to soil organic status. Environ. Sci. Technol. 42:2819-2825.
8. Lundquist, E. J., L. E. Jackson, K. M. Scow, and C. Hsu. 1999. Changes in microbial biomass and community composition, and soil carbon and nitrogen pools after incorporation of rye into three California agricultural soils. Soil Biol. Biochem. 31:221-236.
9. McDonald, I. R., S. Radajewski, and J. C. Murell. 2005. Stable isotope probing of nucleic acids in methanotrophs and methylotrophs: a review. Org. Geochem. 36:779-787.
10. Oorts, K., H. Bronckaers, and E. Smolders. 2006. Discrepancy of the microbial response to elevated copper between freshly spiked and long-term contaminated soils. Environ. Toxicol. Chem. 25:845-853.
11. Powlson, D. S., P. Smith, and J. U. Smith (ed.). 1996. NATO ASI series I, vol.38, p. 429. Springer, Heidelberg, Germany.
12. Rajapaksha, R. M. C. P., M. A. Tobor-Kaplon, and E. Bååth. 2004. Metal toxicity affects fungal and bacterial activities in soil differently. Appl. Environ. Microbiol. 70:2966-2973.
13. Ranjard, L., L. Lignier, and R. Chaussod. 2006. Cumulative effects of short term poly-metallic contaminations on soil bacterial community structure. Appl. Environ. Microbiol. 72:1684-1687.
14. Ranjard, L., V. Nowak, A. Echairi, V. Faloya, and R. Chaussod. 2008. The dynamics of soil bacterial community structure in response to yearly repeated agricultural copper treatments. Res. Microbiol. 159:251-254.
15. Tobor-Kaplon, M. A., J. Bloem, P. F. A. M. Römkens, and P. C. de Ruiter. 2005. Functional stability of microbial communities in contaminated soils. Oikos 111:119-129. (Pubitemid 41424057)