Molecular epidemiology of rotavirus diarrhea among children aged <5 years in Nepal: predominance of emergent g12 strains during 2 years

Journal of Infectious Diseases

Volumn 200, Issue SUPPL. 1, 2009, Pages

  Sherchand, Jeevan Bahadur ^a   Nakagomi, Osamu ^c,d   Dove, Winifred ^d   Nakagomi, Toyoko ^c,d   Yokoo, Michiyo ^c   Pandey, Basu Dev ^b   Cuevas, Luis E ^e   Hart, C Anthony ^d   Cunliffe, Nigel A ^d  

^a TRIBHUVAN UNIVERSITY   (Nepal)

^b Sukraraj Tropical and Infectious Disease Hospital Kathmandu   (Nepal)

^c NAGASAKI UNIVERSITY   (Japan)

^d UNIVERSITY OF LIVERPOOL   (United Kingdom)

^e LIVERPOOL SCHOOL OF TROPICAL MEDICINE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

ACUTE DIARRHEA; ARTICLE; CHILD; ENZYME LINKED IMMUNOSORBENT ASSAY; FECES ANALYSIS; GENOTYPE; HOSPITALIZED CHILD; HUMAN; INFANT; MAJOR CLINICAL STUDY; MOLECULAR EPIDEMIOLOGY; NEPAL; PRESCHOOL CHILD; PRIORITY JOURNAL; ROTAVIRUS; VIRUS DETECTION; VIRUS IDENTIFICATION; VIRUS INFECTION; VIRUS STRAIN;

CHILD, PRESCHOOL; DIARRHEA; GENOTYPE; HOSPITALIZATION; HUMANS; INFANT; INFANT, NEWBORN; NEPAL; ROTAVIRUS; ROTAVIRUS INFECTIONS; TIME FACTORS;

EID: 72849126425     PISSN: 00221899     EISSN: None     Source Type: Journal    
DOI: 10.1086/605046     Document Type: Article

References (24)

1. Parashar UD, Gibson CJ, Bresee JS, Glass RI. Rotavirus and severe childhood diarrhea. Emerg Infect Dis 2006; 12:304-306
2. Nakagomi O, Cunliffe NA. Rotavirus vaccines: entering a new stage of deployment. Curr Opin Infect Dis 2007; 20:501-507 (Pubitemid 47359647) (Pubitemid 47359647)
3. Estes MK, Kapikian AZ. Rotaviruses. In: Knipe DM, Howley PM, eds. Fields virology. 5th ed. Vol.2. Philadelphia:Wolters Kluwer, Lippincott Williams & Wilkins, 2007:1917-1974
4. Kapikian AZ, Hoshino Y. To serotype or not to serotype: that is still the question. J Infect Dis 2007; 195:611-614 (Pubitemid 46273030) (Pubitemid 46273030)
5. Green KY, Taniguchi K, Mackow ER, Kapikian AZ. Homotypic and heterotypic epitope-specific antibody responses in adult and infant rotavirus vaccinees: implications for vaccine development. J Infect Dis 1990; 161:667-679 (Pubitemid 20120223)
6. Jiang B, Gentsch JR, Glass RI. The role of serum antibodies in the protection against rotavirus disease. Clin Infect Dis 2002; 34:1351-1361 (Pubitemid 34507945) (Pubitemid 34507945)
7. Uchida R, Pandey BD, Sherchand JB, et al. Molecular epidemiology of rotavirus diarrhea among children and adults in Nepal: detection of G12 strains with P[6] or P[8] and a G11P[25] strain. J ClinMicrobiol 2006; 44:3499-3505
8. Bresee JS, Hummelman E, Nelson EAS, Glass RI. Rotavirus in Asia: the value of surveillance for informing decisions about the introduction of new vaccines. J Infect Dis 2005; 192(Suppl 1):S1-5.
9. Pun SB, Nakagomi T, Sherchand JB, et al. Detection of G12 human rotaviruses in Nepal. Emerg Infect Dis 2007; 13:482-484 (Pubitemid 46348138)
10. Gouvea V, Glass RI, Woods P, et al. Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J Clin Microbiol 1990; 28:276-282 (Pubitemid 20050935)
11. Gentsch JR, Glass RI,Woods P, et al. Identification of group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol 1992; 30: 1365-1373
12. Koshimura Y, Nakagomi T, Nakagomi O. The relative frequencies of G serotypes of rotaviruses recovered from hospitalized children with diarrhea: a 10-year survey (1987-1996) in Japan with a review of globally collected data. Microbiol Immunol 2000; 44:499-510.
13. Kutsuzawa T, Konno T, Suzuki H, Ebina T, Ishida N. Two distinct electrophoretic migration patterns of RNA segments of human rotaviruses prevalent in Japan in relation to their serotypes. Microbiol Immunol 1982; 26:271-273 (Pubitemid 12088988)
14. World Health Organization. Rotavirus vaccines. Wkly Epidemiol Rec 2007; 82:285-296
15. Wang YH, Kobayashi N, Zhou DJ, et al. Molecular epidemiologic anal ysis of group A rotaviruses in adults and children with diarrhea in Wuhan city, China, 2000-2006. Arch Virol 2007; 152:669-685
16. Phan TG, Trinh QD, Khamrin P, et al. Emergence of new variant rotavirus G3 among infants and children with acute gastroenteritis in Japan during 2003-2004. Clin Lab 2007; 53:41-48
17. Taniguchi K, Urasawa T, Kobayashi N, Gorziglia M, Urasawa S. Nucleotide sequence of VP4 and VP7 genes of human rotaviruses with subgroup I specificity and long RNA pattern: implication for new G serotype specificity. J Virol 1990; 64:5640-5644 (Pubitemid 20364561)
18. Das S, Varghese V, Chaudhury S, et al. Emergence of novel human group A rotavirus G12 strains in India. J Clin Microbiol 2003; 41: 2760-2762 (Pubitemid 36712512)
19. Samajdar S, Varghese V, Barman P, et al. Changing pattern of human group A rotaviruses: emergence of G12 as an important pathogen among children in eastern India. J Clin Virol 2006; 36:183-188 (Pubitemid 43890928) (Pubitemid 43890928)
20. Ghosh S, Varghese V, Samajdar S, Bhattacharya SK, Kobayashi N, Naik TN. Molecular characterization of a porcine group A rotavirus strain with G12 genotype specificity. Arch Virol 2006; 151:1329-1344 (Pubitemid 43962149) (Pubitemid 43962149)
21. Rahman M, Matthijnssens J, Yang X, et al. Evolutionary history and global spread of the emerging G12 human rotaviruses. J Virol 2007; 81:2382-2390 (Pubitemid 46303355) (Pubitemid 46303355)
22. Ray P, Sharma S, Agarwal RK, et al. First detection of G12 rotaviruses in newborns with neonatal rotavirus infection at All India Institute of Medical Sciences, New Delhi, India. J Clin Microbiol 2007; 45:3824-3827 (Pubitemid 350156896) (Pubitemid 350156896)
23. Sharma S, Ray P, Gentsch JR, Glass RI, Kalra V, Bhan MK. Emergence of G12 rotavirus strains in Delhi, India, in 2000 to 2007. J Clin Microbiol 2008; 46:1343-1348
24. Kheyami AM, Nakagomi T, Nakagomi O, Dove W, Hart CA, Cunliffe NA. Molecular epidemiology of rotavirus diarrhea among children in Saudi Arabia: first detection of G9 and G12 strains. J Clin Microbiol 2008; 46:1185-1191 (Pubitemid 351575191) (Pubitemid 351575191)