메뉴 건너뛰기




Volumn 84, Issue 1, 2010, Pages 532-542

Microarray analysis of Paramecium bursaria chlorella virus 1 transcription

Author keywords

[No Author keywords available]

Indexed keywords

APHIDICOLIN; COMPLEMENTARY DNA; VIRUS DNA;

EID: 72849113546     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.01698-09     Document Type: Article
Times cited : (39)

References (43)
  • 1
    • 33746861090 scopus 로고    scopus 로고
    • Virion-associated restriction endonucleases of chloroviruses
    • Agarkova, I. V., D. D. Dunigan, and J. L. Van Etten. 2006. Virion-associated restriction endonucleases of chloroviruses. J. Virol. 80:8114-8123.
    • (2006) J. Virol. , vol.80 , pp. 8114-8123
    • Agarkova, I.V.1    Dunigan, D.D.2    Van Etten, J.L.3
  • 2
    • 57349124521 scopus 로고    scopus 로고
    • Chlorovirus-mediated membrane depolarization of chlorella alters secondary active transport of solutes
    • Agarkova, I. V., D. Dunigan, J. Gurnon, T. Greiner, J. Barres, G. Thiel, and J. L. Van Etten. 2008. Chlorovirus-mediated membrane depolarization of chlorella alters secondary active transport of solutes. J. Virol. 82:12181-12190.
    • (2008) J. Virol. , vol.82 , pp. 12181-12190
    • Agarkova, I.V.1    Dunigan, D.2    Gurnon, J.3    Greiner, T.4    Barres, J.5    Thiel, G.6    Van Etten, J.L.7
  • 5
    • 34848818806 scopus 로고    scopus 로고
    • Vaccinia, Inc.: Probing the functional substrate of poxviral replication factories
    • Condit, R. C. 2007. Vaccinia, Inc.: probing the functional substrate of poxviral replication factories. Cell Host Microbe 2:205-207.
    • (2007) Cell Host Microbe , vol.2 , pp. 205-207
    • Condit, R.C.1
  • 6
    • 0030692815 scopus 로고    scopus 로고
    • Hyaluronan synthase of chlorella virus PBCV-1
    • DOI 10.1126/science.278.5344.1800
    • DeAngelis, P., W. Jing, M. V. Graves, D. E. Burbank, and J. L. Van Etten. 1997. Hyaluronan synthase of chlorella virus PBCV-1. Science 278:1800-1803. (Pubitemid 27527647)
    • (1997) Science , vol.278 , Issue.5344 , pp. 1800-1803
    • Deangelis, P.L.1    Jing, W.2    Graves, M.V.3    Burbank, D.E.4    Van Etten, J.L.5
  • 8
    • 33846362288 scopus 로고    scopus 로고
    • Sequence and annotation of the 369-kb NY-2A and the 345-kb AR158 viruses that infect Chlorella NC64A
    • DOI 10.1016/j.virol.2006.08.033, PII S0042682206006027
    • Fitzgerald, L. A., M. V. Graves, X. Li, T. Feldblyum, W. C. Nierman, and J. L. Van Etten. 2007. Sequence and annotation of the 369-kb NY-2A and the 345-kb AR158 viruses that infect Chlorella NC64A. Virology 358:472-484. (Pubitemid 46157034)
    • (2007) Virology , vol.358 , Issue.2 , pp. 472-484
    • Fitzgerald, L.A.1    Graves, M.V.2    Li, X.3    Feldblyum, T.4    Nierman, W.C.5    Van Etten, J.L.6
  • 11
    • 0035811885 scopus 로고    scopus 로고
    • Molecular and genetic evidence for a virus-encoded glycosyltransferase involved in protein glycosylation
    • Graves, M. V., C. T. Bernardt, R. Cerny, and J. L. Van Etten. 2001. Molecular and genetic evidence for a virus-encoded glycosyltransferase involved in protein glycosylation. Virology 285:332-345.
    • (2001) Virology , vol.285 , pp. 332-345
    • Graves, M.V.1    Bernardt, C.T.2    Cerny, R.3    Van Etten, J.L.4
  • 12
    • 0026691692 scopus 로고
    • Characterization of the major capsid protein and cloning of its gene from algal virus PBCV-1
    • Graves, M. V., and R. H. Meints. 1992. Characterization of the major capsid protein and cloning of its gene from algal virus PBCV-1. Virology 188:198-207.
    • (1992) Virology , vol.188 , pp. 198-207
    • Graves, M.V.1    Meints, R.H.2
  • 13
    • 3242686338 scopus 로고    scopus 로고
    • Genetic diversity in chlorella viruses flanking kcv, a gene that encodes a potassium ion channel protein
    • Kang, M., M. Graves, M. Mehmel, A. Moroni, S. Gazzarrini, G. Thiel, J. R. Gurnon, and J. L. Van Etten. 2004. Genetic diversity in chlorella viruses flanking kcv, a gene that encodes a potassium ion channel protein. Virology 326:150-159.
    • (2004) Virology , vol.326 , pp. 150-159
    • Kang, M.1    Graves, M.2    Mehmel, M.3    Moroni, A.4    Gazzarrini, S.5    Thiel, G.6    Gurnon, J.R.7    Van Etten, J.L.8
  • 14
    • 1242319467 scopus 로고    scopus 로고
    • Immediate early genes expressed in chlorovirus infections
    • DOI 10.1016/j.virol.2003.09.015
    • Kawasaki, T., M. Tanaka, M. Fujie, S. Usami, and T. Yamada. 2004. Immediate early genes expressed in chlorovirus infections. Virology 318:214-223. (Pubitemid 38234275)
    • (2004) Virology , vol.318 , Issue.1 , pp. 214-223
    • Kawasaki, T.1    Tanaka, M.2    Fujie, M.3    Usami, S.4    Yamada, T.5
  • 15
    • 67549090128 scopus 로고    scopus 로고
    • Best practices for hybridization design in two-colour microarray analysis
    • Knapen, D., L. Vergauwen, K. Laukens, and R. Blust. 2009. Best practices for hybridization design in two-colour microarray analysis. Trends Biotechnol. 27:406-414.
    • (2009) Trends Biotechnol. , vol.27 , pp. 406-414
    • Knapen, D.1    Vergauwen, L.2    Laukens, K.3    Blust, R.4
  • 16
    • 0032566906 scopus 로고    scopus 로고
    • Chlorella virus PBCV-1 encodes functional glutamine: Fructose-6- Phosphate amidotransferase and UDP-glucose dehydrogenase enzymes
    • DOI 10.1006/viro.1998.9388
    • Landstein, D., M. V. Graves, D. E. Burbank, P. DeAngelis, and J. L. Van Etten. 1998. Chlorella virus PBCV-1 encodes functional glutamine:fructose- 6-phosphate amidotransferase and UDP-glucose dehydrogenase enzymes. Virology 250:388-396. (Pubitemid 28489638)
    • (1998) Virology , vol.250 , Issue.2 , pp. 388-396
    • Landstein, D.1    Graves, M.V.2    Burbank, D.E.3    Deangelis, P.4    Van Etten, J.L.5
  • 17
    • 29744465301 scopus 로고    scopus 로고
    • Transcription program of red sea bream iridovirus as revealed by DNA microarrays
    • DOI 10.1128/JVI.79.24.15151-15164.2005
    • Lua, D. T., M. Yasuike, I. Hirono, and T. Aoki. 2005. Transcription program of Red Sea bream iridovirus as revealed by DNA microarrays. J. Virol. 79:15151-15164. (Pubitemid 43032298)
    • (2005) Journal of Virology , vol.79 , Issue.24 , pp. 15151-15164
    • Lua, D.T.1    Yasuike, M.2    Hirono, I.3    Aoki, T.4
  • 18
    • 0036435633 scopus 로고    scopus 로고
    • Microarray analysis of gene expression during bacteriophage T4 infection
    • DOI 10.1006/viro.2002.1409
    • Luke, K., A. Radek, X. Liu, J. Campbell, M. Uzan, R. Haselkorn, and Y. Kogan. 2002. Microarray analysis of gene expression during bacteriophage T4 infection. Virology 299:182-191. (Pubitemid 35356595)
    • (2002) Virology , vol.299 , Issue.2 , pp. 182-191
    • Luke, K.1    Radek, A.2    Liu, X.3    Campbell, J.4    Uzan, M.5    Haselkorn, R.6    Kogan, Y.7
  • 20
    • 0032557427 scopus 로고    scopus 로고
    • Characterization of a novel cis-syn and trans-syn II pyrimidine dimer glycosylase/AP lyase from a eukaryotic algal virus, PBCV-1
    • McCullough, A. K., M. T. Romberg, S. Nyaga, Y. Wei, T. G. Wood, J. S. Taylor, J. L. Van Etten, M. L. Dodson, and R. S. Lloyd. 1998. Characterization of a novel cis-syn and trans-syn II pyrimidine dimer glycosylase/AP lyase from a eukaryotic algal virus, PBCV-1. J. Biol. Chem. 273:13136-13142.
    • (1998) J. Biol. Chem. , vol.273 , pp. 13136-13142
    • McCullough, A.K.1    Romberg, M.T.2    Nyaga, S.3    Wei, Y.4    Wood, T.G.5    Taylor, J.S.6    Van Etten, J.L.7    Dodson, M.L.8    Lloyd, R.S.9
  • 21
    • 0022474814 scopus 로고
    • Assembly site of the virus PBCV-1 in a Chlorella-like green alga: Ultrastructural studies
    • DOI 10.1016/0042-6822(86)90448-4
    • Meints, R. H., K. Lee, and J. L. Van Etten. 1986. Assembly site of the virus PBCV-1 in a chlorella-like green alga: ultrastructural studies. Virology 154: 240-245. (Pubitemid 16015612)
    • (1986) Virology , vol.154 , Issue.1 , pp. 240-245
    • Meints, R.H.1    Lee, K.2    Van Etten, J.L.3
  • 22
    • 0021709441 scopus 로고
    • Infection of a chlorella-like alga with the virus, PBCV-1: Ultrastructural studies
    • DOI 10.1016/0042-6822(84)90358-1
    • Meints, R. H., K. Lee, D. E. Burbank, and J. L. Van Etten. 1984. Infection of a chlorella-like alga with the virus, PBCV-1: ultrastructural studies. Virology 138:341-346. (Pubitemid 15189130)
    • (1984) Virology , vol.138 , Issue.2 , pp. 341-346
    • Meints, R.H.1    Lee, K.2    Burbank, D.E.3
  • 26
    • 33748701013 scopus 로고    scopus 로고
    • C-terminal repetitive motifs in Vp130 present at the unique vertex of the Chlorovirus capsid are essential for binding to the host Chlorella cell wall
    • DOI 10.1016/j.virol.2006.06.010, PII S0042682206004028
    • Onimatsu, H., K. Suganuma, S. Uenoyama, and T. Yamada. 2006. C-terminal repetitive motifs in Vp130 present at the unique vertex of the chlorovirus capsid are essential for binding to the host chlorella cell wall. Virology 353:433-442. (Pubitemid 44397143)
    • (2006) Virology , vol.353 , Issue.2 , pp. 433-442
    • Onimatsu, H.1    Suganuma, K.2    Uenoyama, S.3    Yamada, T.4
  • 27
    • 49949096746 scopus 로고    scopus 로고
    • Comparative analysis of viral gene expression programs during poxvirus infection: A transcriptional map of the vaccinia and monkeypox genomes
    • Rubins, K. H., L. E. Hensley, G. W. Bell, C. Wang, E. J. Lefkowitz, P. O. Brown, and D. A. Relman. 2008. Comparative analysis of viral gene expression programs during poxvirus infection: a transcriptional map of the vaccinia and monkeypox genomes. PLoS ONE 3:e2628.
    • (2008) PLoS ONE , vol.3
    • Rubins, K.H.1    Hensley, L.E.2    Bell, G.W.3    Wang, C.4    Lefkowitz, E.J.5    Brown, P.O.6    Relman, D.A.7
  • 29
    • 0022648184 scopus 로고
    • Infection of a Chlorella-like alga with the virus PBCV-1: Transcriptional studies
    • DOI 10.1016/0042-6822(86)90413-7
    • Schuster, A. M., L. Girton, D. E. Burbank, and J. L. Van Etten. 1986. Infection of a chlorella-like alga with the virus PBCV-1: transcriptional studies. Virology 148:181-189. (Pubitemid 16186650)
    • (1986) Virology , vol.148 , Issue.1 , pp. 181-189
    • Schuster, A.M.1    Girton, L.2    Burbank, D.E.3
  • 30
    • 0033604280 scopus 로고    scopus 로고
    • Characterization of two chitinase genes and one chitosanase gene encoded by chlorella virus PBCV-1
    • DOI 10.1006/viro.1999.9958
    • Sun, L., B. Adams, J. R. Gurnon, Y. Ye, and J. L. Van Etten. 1999. Characterization of two chitinase genes and one chitosanase gene encoded by chlorella virus PBCV-1. Virology 263:376-387. (Pubitemid 29521529)
    • (1999) Virology , vol.263 , Issue.2 , pp. 376-387
    • Sun, L.1    Adams, B.2    Gurnon, J.R.3    Ye, Y.4    Van Etten, J.L.5
  • 31
    • 44949090369 scopus 로고    scopus 로고
    • Whole-genome transcriptional profiles of a novel marine fish iridovirus, Singapore grouper iridovirus (SGIV) in virus-infected grouper spleen cell cultures and in orange-spotted grouper, Epinephulus coioides
    • DOI 10.1016/j.virol.2008.04.011, PII S0042682208002158
    • Teng, Y., Z. Hou, J. Gong, H. Liu, X. Xie, L. Zhang, X. Chen, and Q. W. Qin. 2008. Whole-genome transcriptional profiles of a novel marine fish iridovirus, Singapore grouper iridovirus (SGIV) in virus-infected grouper spleen cell cultures and in orange-spotted grouper, Epinephulus coioides. Virology 377:39-48. (Pubitemid 351802274)
    • (2008) Virology , vol.377 , Issue.1 , pp. 39-48
    • Teng, Y.1    Hou, Z.2    Gong, J.3    Liu, H.4    Xie, X.5    Zhang, L.6    Chen, X.7    Qin, Q.W.8
  • 33
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher, V. G., R. Tibshirani, and G. Chu. 2001. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA 98:5116-5121.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 34
    • 0346599192 scopus 로고    scopus 로고
    • Unusual lifestyle of giant chlorella viruses
    • Van Etten, J. L. 2003. Unusual lifestyle of giant chlorella viruses. Annu. Rev. Genet. 37:153-195.
    • (2003) Annu. Rev. Genet. , vol.37 , pp. 153-195
    • Van Etten, J.L.1
  • 36
    • 0000641026 scopus 로고
    • Viruses of eukaryotic chlorella-like algae
    • Y. Koltin and M. J. Leibowitz (ed.), Marcel Dekker, Inc., New York, NY
    • Van Etten, J. L., A. M. Schuster, and R. H. Meints. 1988. Viruses of eukaryotic chlorella-like algae, p. 411-428. In Y. Koltin and M. J. Leibowitz (ed.), Viruses of fungi and simple eukaryotes. Marcel Dekker, Inc., New York, NY.
    • (1988) Viruses of fungi and simple eukaryotes , pp. 411-428
    • Van Etten, J.L.1    Schuster, A.M.2    Meints, R.H.3
  • 37
    • 0021262414 scopus 로고
    • DNA synthesis in a Chlorella-like alga following infection with the virus PBCV-1
    • Van Etten, J. L., D. E. Burbank, J. Joshi, and R. H. Meints. 1984. DNA synthesis in a chlorella-like alga following infection with the virus PBCV-1. Virology 134:443-449. (Pubitemid 14107440)
    • (1984) Virology , vol.134 , Issue.2 , pp. 443-449
    • Van Etten, J.L.1    Burbank, D.E.2    Joshi, J.3    Meints, R.H.4
  • 39
    • 66949154066 scopus 로고    scopus 로고
    • The Phycodnaviridae: The story of how tiny giants rule the world
    • J. L. Van Etten (ed.), Springer-Verlag, Berlin, Germany
    • Wilson, W. H., J. L. Van Etten, and M. J. Allen. 2008. The Phycodnaviridae: the story of how tiny giants rule the world, p. 1-42. In J. L. Van Etten (ed.), Lesser known large dsDNA viruses. Springer-Verlag, Berlin, Germany.
    • (2008) Lesser known large dsDNA viruses , pp. 1-42
    • Wilson, W.H.1    Van Etten, J.L.2    Allen, M.J.3
  • 40
    • 33746313502 scopus 로고    scopus 로고
    • Chlorella Viruses
    • K. Maramorosch and A. J. Shatkin (ed.), Elsevier Academic Press, Inc., San Diego, CA
    • Yamada, T., H. Onimatsu, and J. L. Van Etten. 2006. Chlorella viruses, p. 293-336. In K. Maramorosch and A. J. Shatkin (ed.), Advances in virus research. Elsevier Academic Press, Inc., San Diego, CA.
    • (2006) Advances in virus research , pp. 293-336
    • Yamada, T.1    Onimatsu, H.2    Van Etten, J.L.3
  • 41
    • 0036319960 scopus 로고    scopus 로고
    • Design issues for cDNA microarray experiments
    • Yang, Y. H., and T. Speed. 2002. Design issues for cDNA microarray experiments. Nat. Rev. 3:579-588.
    • (2002) Nat. Rev. , vol.3 , pp. 579-588
    • Yang, Y.H.1    Speed, T.2
  • 42
    • 34447269915 scopus 로고    scopus 로고
    • Chloroviruses encode a bifunctional dCMP-dCTP deaminase that produces two key intermediates in dTTP formation
    • DOI 10.1128/JVI.00186-07
    • Zhang, Y., F. Maley, G. F. Maley, G. Duncan, D. D. Dunigan, and J. L. Van Etten. 2007. Chloroviruses encode a bifunctional dCMP-dCTP deaminase that produces two key intermediates in dTTP formation. J. Virol. 81:7662-7671. (Pubitemid 47047851)
    • (2007) Journal of Virology , vol.81 , Issue.14 , pp. 7662-7671
    • Zhang, Y.1    Maley, F.2    Maley, G.F.3    Duncan, G.4    Dunigan, D.D.5    Van Etten, J.L.6
  • 43
    • 34548409964 scopus 로고    scopus 로고
    • Structure and Function of a Chlorella Virus-Encoded Glycosyltransferase
    • DOI 10.1016/j.str.2007.07.006, PII S0969212607002754
    • Zhang, Y., Y. Xiang, J. L. Van Etten, and M. G. Rossmann. 2007. Structure and function of a chlorella virus PBCV-1 encoded glycosyltransferase. Structure 15:1031-1039. (Pubitemid 47362685)
    • (2007) Structure , vol.15 , Issue.9 , pp. 1031-1039
    • Zhang, Y.1    Xiang, Y.2    Van Etten, J.L.3    Rossmann, M.G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.