Identification of potential DREB2C targets in Arabidopsis thaliana plants overexpressing DREB2C using proteomic analysis

Molecules and Cells

Volumn 28, Issue 4, 2009, Pages 383-388

  Lee, Kyunghee ^a   Han, Ki Soo ^b   Kwon, Young Sang ^b   Lee, Jung Han ^b   Kim, Sun Ho ^b   Chung, Woo Sik ^b   Kim, Yujung ^b   Chun, Sung Sik ^c   Kim, Hee Kyu ^b   Bae, Dong Won ^b  

^a Yeungnam University College of Medicine   (South Korea)

^b Gyeongsang National University   (South Korea)

^c International University of Korea   (South Korea)

Author keywords

Arabidopsis; Dehydration responsive element; DREB2C; Proteomic analysis; Thermotolerance

Indexed keywords

3BETA HYDROXY DELTA5 STEROID DEHYDROGENASE; BINDING PROTEIN; CARBONATE DEHYDRATASE; DEHYDRATION RESPONSIVE ELEMENT BINDING PROTEIN 2C; ELONGATION FACTOR TU; GLUTATHIONE TRANSFERASE; GLUTATHIONE TRANSFERASE 8; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; PEPTIDYLPROLYL ISOMERASE; PEPTIDYLPROLYL ISOMERASE ROC4; TRANSCRIPTION FACTOR PDX 1; UNCLASSIFIED DRUG;

ARABIDOPSIS; ARTICLE; CONTROLLED STUDY; DOWN REGULATION; GENE CONTROL; GENE OVEREXPRESSION; HEAT STRESS; HEAT TOLERANCE; MASS SPECTROMETRY; MICROARRAY ANALYSIS; NONHUMAN; PROMOTER REGION; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN MOTIF; PROTEIN TARGETING; PROTEOMICS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; UPREGULATION;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; DEHYDRATION; GENE EXPRESSION REGULATION, PLANT; HEAT-SHOCK RESPONSE; HOT TEMPERATURE; PROTEOMICS; RNA, MESSENGER; TRANSCRIPTION FACTORS;

ARABIDOPSIS; ARABIDOPSIS THALIANA; CAULIFLOWER MOSAIC VIRUS;

EID: 72449210138     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10059-009-0154-4     Document Type: Article

References (33)

1. P.K. Agarwal P. Agarwal M.K. Reddy S.K. Sopory 2006 Role of DREB transcription factors in abiotic and biotic stress tolerance in plants Plant Cell Rep. 25 1263 1274 10.1007/s00299-006-0204-8 1:CAS:528:DC%2BD28Xht1Wrt7fM 16858552 (Pubitemid 44786606)
2. S.I. Allakhverdiev V.D. Kreslavski V.V. Klimov D.A. Los R. Carpentier P. Mohanty 2008 Heat stress: an overview of molecular responses in photosynthesis Photosynth. Res. 98 541 550 10.1007/s11120-008-9331-0 1:CAS:528: DC%2BD1cXhsVOgt7bF 18649006 (Pubitemid 50216640)
3. D. Baek Y. Jin J.C. Jeong H.J. Lee H. Moon J. Lee D. Shin C.H. Kang D.H. Kim J. Nam 2008 Suppression of reactive oxygen species by glyceraldehyde-3- phosphate dehydrogenase Phytochemistry 69 333 338 10.1016/j.phytochem.2007.07. 027 1:CAS:528:DC%2BD1cXisF2nsQ%3D%3D 17854848
4. H. Blum H. Beier H.J. Gross 1987 Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels Electrophoresis 8 93 99 10.1002/elps.1150080203 1:CAS:528:DyaL2sXhsFagtLc%3D
5. J.J. Burke 2001 Identification of genetic diversity and mutations in higher plant acquired thermotolerance Physiol. Plant. 112 167 170 10.1034/j.1399-3054.2001.1120203.x 1:CAS:528:DC%2BD3MXktFeltr8%3D (Pubitemid 32507559)
6. W. Cai J. Ma J. Guo L. Zhang 2008 Function of ROC4 in the efficient repair of photodamaged photosystem II in Arabidopsis Photochem. Photobiol. 84 1343 1348 10.1111/j.1751-1097.2008.00448.x 1:CAS:528:DC%2BD1cXhsVWkt7zE 19067955
7. H. Chen L. Xiong 2005 Pyridoxine is required for post-embryonic root development and tolerance to osmotic and oxidative stresses Plant J. 44 396 408 10.1111/j.1365-313X.2005.02538.x 1:CAS:528:DC%2BD2MXht1alsbnP 16236150 (Pubitemid 43919869)
8. S.A. Denslow E.E. Rueschhoff M.E. Daub 2007 Regulation of the Arabidopsis thaliana vitamin B6 biosynthesis genes by abiotic stress Plant Physiol. Biochem. 45 152 161 10.1016/j.plaphy.2007.01.007 1:CAS:528:DC%2BD2sXjsVGhsbs%3D 17344055 (Pubitemid 46436510)
9. C. Guy F. Kaplan J. Kopka J. Selbig D.K. Hincha 2008 Metabolomics of temperature stress Physiol. Plant 132 220 235 1:CAS:528:DC%2BD1cXhslGlurs%3D 18251863
10. B. Hong C. Ma Y. Yang T. Wang K. Yamaguchi-Shinozaki J. Gao 2009 Over-expression of AtDREB1A in chrysanthemum enhances tolerance to heat stress Plant Mol. Biol. 70 231 240 10.1007/s11103-009-9468-z 1:CAS:528: DC%2BD1MXltlygurw%3D 19234675
11. B. Huang C. Xu 2008 Identification and characterization of proteins associated with plant tolerance to heat stress J. Integr. Plant Biol. 50 1230 1237 10.1111/j.1744-7909.2008.00735.x 1:CAS:528:DC%2BD1cXhtlaitbrE 19017110
12. S.T. Kim K.S. Cho Y.S. Jang K.Y. Kang 2001 Two-dimensional electrophoretic analysis of rice proteins by polyethylene glycol fractionation for protein arrays Electrophoresis 10 2103 2109 10.1002/1522-2683(200106)22: 10<2103::AID-ELPS2103>3.0.CO;2-W (Pubitemid 32621941)
13. K. Lee M. Kye J.S. Jang O.J. Lee T. Kim D. Lim 2004 Proteomic analysis revealed a strong association of a high level of alpha1-antitrypsin in gastric juice with gastric cancer Proteomics 4 3343 3352 10.1002/pmic.200400960 1:CAS:528:DC%2BD2cXhtVaqsLfL 15378737 (Pubitemid 39525282)
14. D.G. Lee N. Ahsan S.H. Lee K.Y. Kang J.D. Bahk I.J. Lee B.H. Lee 2007 A proteomic approach in analyzing heat-responsive proteins in rice leaves Proteomics 7 3369 3383 10.1002/pmic.200700266 1:CAS:528:DC%2BD2sXhtFGmsbnO 17722143 (Pubitemid 47517952)
15. 2+-ATPase (ACA11) that is localized to vacuole membranes in Arabidopsis FEBS Lett. 581 3943 3949 10.1016/j.febslet.2007.07.023 1:CAS:528:DC%2BD2sXovFylu70%3D 17662727 (Pubitemid 47212100)
16. C.J. Lim K.A. Yang J.K. Hong J.S. Choi D.J. Yun J.C. Hong W.S. Chung S.Y. Lee M.J. Cho C.O. Lim 2006 Gene expression profiles during heat acclimation in Arabidopsis thaliana suspension-culture cells J. Plant Res. 119 373 383 10.1007/s10265-006-0285-z 1:CAS:528:DC%2BD28Xnt1agtLo%3D 16807682 (Pubitemid 44126203)
17. C.J. Lim J.E. Hwang H. Chen J.K. Hong K.A. Yang M.S. Choi K.O. Lee W.S. Chung S.Y. Lee C.O. Lim 2007 Over-expression of the Arabidopsis DRE/CRT-binding transcription factor DREB2C enhances thermotolerance Biochem. Biophys. Res. Commun. 362 431 436 10.1016/j.bbrc.2007.08.007 1:CAS:528:DC%2BD2sXpvFKmsrg%3D 17716623 (Pubitemid 47332427)
18. V. Lippuner I.T. Chou S.V. Scott W.F. Ettinger S.M. Theg C.S. Gasser 1994 Cloning and characterization of chloroplast and cytosolic forms of cyclophilin from Arabidopsis thaliana J. Biol. Chem. 269 7863 7868 1:CAS:528: DyaK2cXkt12ntr4%3D 8132503
19. Q. Liu M. Kasuga Y. Sakuma H. Abe S. Miura K. Yamaguchi-Shinozaki K. Shinozaki 1998 Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis Plant Cell 10 1391 1406 10.1105/tpc.10.8.1391 1:CAS:528:DyaK1cXls1SisLs%3D 9707537 (Pubitemid 28542172)
20. P.F. McCabe C.J. Leaver 2000 Programmed cell death in cell cultures Plant Mol. Biol. 44 359 368 10.1023/A:1026500810877 1:CAS:528:DC%2BD3MXmtFajtg%3D%3D 11199394 (Pubitemid 32139550)
21. A. Moons 2003 Osgstu3 and osgtu4, encoding tau class glutathione S-transferases, are heavy metal- and hypoxic stress-induced and differentially salt stress-responsive in rice roots FEBS Lett. 553 427 432 10.1016/S0014- 5793(03)01077-9 1:CAS:528:DC%2BD3sXot1yqurw%3D 14572664 (Pubitemid 37315644)
22. K. Motohashi F. Koyama Y. Nakanishi H. Ueoka-Nakanishi T. Hisabori 2003 Chloroplast cyclophilin is a target protein of thioredoxin. Thiol modulation of the peptidyl-prolyl cis-trans isomerase activity J. Biol. Chem. 278 31848 31852 10.1074/jbc.M304258200 1:CAS:528:DC%2BD3sXmsVOnur8%3D 12923164 (Pubitemid 37048368)
23. D. Rao I. Momcilović S. Kobayashi E. Callegari Z. Ristic 2004 Chaperone activity of recombinant maize chloroplast protein synthesis elongation factor, EF-Tu Eur. J. Biochem. 271 3684 3692 10.1111/j.1432-1033.2004.04309.x 1:CAS:528:DC%2BD2cXnvVWmsrs%3D 15355346 (Pubitemid 39233611)
24. Z. Ristic I. Momcilović J. Fu E. Callegari B.P. DeRidder 2007 Chloroplast protein synthesis elongation factor, EF-Tu, reduces thermal aggregation of rubisco activase J. Plant Physiol. 164 1564 1571 10.1016/j.jplph.2007.07.008 1:CAS:528:DC%2BD2sXhsVOnsrzJ 17766005 (Pubitemid 350087326)
25. J.K. Rose S. Bashir J.J. Giovannoni M.M. Jahn R.S. Saravanan 2004 Tackling the plant proteome: practical approaches, hurdles and experimental tools Plant J. 39 715 733 10.1111/j.1365-313X.2004.02182.x 1:CAS:528: DC%2BD2cXos1ylt70%3D 15315634 (Pubitemid 39218780)
26. Y. Sakuma K. Maruyama F. Qin Y. Osakabe K. Shinozaki K. Yamaguchi-Shinozaki 2006 Dual function of an Arabidopsis transcription factor DREB2A in water-stress-responsive and heat-stress-responsive gene expression Proc. Natl. Acad. Sci. USA 103 18822 18827 10.1073/pnas.0605639103 1:CAS:528:DC%2BD28Xhtlahtb3J 17030801 (Pubitemid 44913494)
27. M. Senthil-Kumar G. Kumar V. Srikanthbabu M. Udayakumar 2007 Assessment of variability in acquired thermotolerance: potential option to study genotypic response and the relevance of stress genes J. Plant Physiol. 164 111 125 10.1016/j.jplph.2006.09.009 1:CAS:528:DC%2BD2sXjtlSrtrk%3D 17207553 (Pubitemid 46161919)
28. Z.K. Shinwari K. Nakashima S. Miura M. Kasuga M. Seki K. Yamaguchi-Shinozaki K. Shinozaki 1998 An Arabidopsis gene family encoding DRE/CRT binding proteins involved in low-temperature-responsive gene expression Biochem. Biophys. Res. Commun. 250 161 170 10.1006/bbrc.1998.9267 1:CAS:528:DyaK1cXlvFaltLk%3D 9735350 (Pubitemid 28448641)
29. E.J. Stockinger S.J. Gilmour M.F. Thomashow 1997 Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit Proc. Natl. Acad. Sci. USA 94 1035 1040 10.1073/pnas.94.3.1035 1:CAS:528:DyaK2sXhtVyhsLc%3D 9023378 (Pubitemid 27074443)
30. O. Titiz M. Tambasco-Studart E. Warzych K. Apel N. Amrhein C. Laloi T.B. Fitzpatrick 2006 PDX1 is essential for vitamin B6 biosynthesis, development and stress tolerance in Arabidopsis Plant J. 48 933 946 10.1111/j.1365-313X.2006. 02928.x 1:CAS:528:DC%2BD2sXmvV2ntA%3D%3D 17227548 (Pubitemid 44924353)
31. A. Wahid S. Gelani M. Ashraf M.R. Foolad 2007 Heat tolerance in plants: An overview Environ. Exp. Bot. 61 199 223 10.1016/j.envexpbot.2007.05.011 (Pubitemid 47513191)
32. D. Weijers M. Franke-van Dijk R.J. Vencken A. Quint P. Hooykaas R. Offringa 2001 An Arabidopsis Minute-like phenotype caused by a semi-dominant mutation in a RIBOSOMAL PROTEIN S5 gene Development 128 4289 4299 1:CAS:528:DC%2BD3MXovVylsrg%3D 11684664
33. K. Yamaguchi-Shinozaki K. Shinozaki 1994 A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress Plant Cell 6 251 264 10.1105/tpc.6.2.251 1:CAS:528: DyaK2cXlslWqu70%3D 8148648 (Pubitemid 2056634)