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Volumn 8, Issue 1, 2009, Pages

Characterizing the D2 statistic: Word matches in biological sequences

Author keywords

Alignment free sequence comparison; Biological sequences; D2

Indexed keywords

TRANSCRIPTION FACTOR;

EID: 72049114999     PISSN: None     EISSN: 15446115     Source Type: Journal    
DOI: 10.2202/1544-6115.1447     Document Type: Article
Times cited : (22)

References (12)
  • 3
    • 34247563994 scopus 로고    scopus 로고
    • Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences
    • For̂et, S., Kantorovitz, M. R. and Burden, C. J. (2006). Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences. BMC Bioinformatics 7 Suppl 5, S21.
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL. 5
    • For̂et, S.1    Kantorovitz, M.R.2    Burden, C.J.3
  • 4
    • 57149115764 scopus 로고    scopus 로고
    • Empirical distribution of k-word matches in biological sequences
    • For̂et, S., Wilson, S. R. and Burden, C. J. (2009). Empirical distribution of k-word matches in biological sequences. Pattern Recognition 42, 539{548.
    • (2009) Pattern Recognition , vol.42 , Issue.539 , pp. 548
    • For̂et, S.1    Wilson, S.R.2    Burden, C.J.3
  • 6
    • 34447260522 scopus 로고    scopus 로고
    • Is multiple-sequence alignment required for accurate inference of phylogeny?
    • Hohl, M. and Ragan, M. A. (2007). Is multiple-sequence alignment required for accurate inference of phylogeny? Syst Biol 56, 206{21.
    • (2007) Syst Biol , vol.56 , Issue.206 , pp. 21
    • Hohl, M.1    Ragan, M.A.2
  • 7
    • 35348812614 scopus 로고    scopus 로고
    • Asymptotic behavior of k-word matches between two uniformly distributed sequences
    • Kantorovitz, M. R., Booth, H. S., Burden, C. J. and Wilson, S. R. (2007). Asymptotic behavior of k-word matches between two uniformly distributed sequences. J Appl Prob 44, 788{805.
    • (2007) J Appl Prob , vol.44 , Issue.788 , pp. 805
    • Kantorovitz, M.R.1    Booth, H.S.2    Burden, C.J.3    Wilson, S.R.4
  • 8
    • 34547844142 scopus 로고    scopus 로고
    • A statistical method for alignment-free comparison of regulatory sequences
    • Kantorovitz, M. R., Robinson, G. E. and Sinha, S. (2007). A statistical method for alignment-free comparison of regulatory sequences. Bioinformatics 23, i249{55.
    • (2007) Bioinformatics , vol.23
    • Kantorovitz, M.R.1    Robinson, G.E.2    Sinha, S.3
  • 9
    • 0037195172 scopus 로고    scopus 로고
    • Distributional regimes for the number of k-word matches between two random sequences
    • Lippert, R. A., Huang, H. andWaterman, M. S. (2002). Distributional regimes for the number of k-word matches between two random sequences. Proc Natl Acad Sci U S A 99, 13980{9.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 13980-13989
    • Lippert, R.A.1    Huang, H.2    Waterman, M.S.3
  • 10
    • 0031599142 scopus 로고    scopus 로고
    • Mersenne Twister: A 623- Dimensionally equidistributed uniform pseudorandom number generator
    • Matsumoto M. and Nishimura T. (1998). Mersenne Twister: A 623- dimensionally equidistributed uniform pseudorandom number generator. ACM Transactions on Modeling and Computer Simulation 8, 3{30.
    • (1998) ACM Transactions on Modeling and Computer Simulation , vol.8 , Issue.3 , pp. 30
    • Matsumoto, M.1    Nishimura, T.2
  • 11
    • 0346463265 scopus 로고    scopus 로고
    • Distribution of words with a pre- Dened range of mismatches to a DNA probe in bacterial genomes
    • Melko, O. M. and Mushegian, A. R. (2004). Distribution of words with a pre- dened range of mismatches to a DNA probe in bacterial genomes. Bioin- formatics 20, 67{74.
    • (2004) Bioin- Formatics , vol.20 , Issue.67 , pp. 74
    • Melko, O.M.1    Mushegian, A.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.