메뉴 건너뛰기




Volumn 5931 LNCS, Issue , 2009, Pages 2-18

Biomedical case studies in data intensive computing

Author keywords

Clouds; Clustering; Dryad; Hadoop; MapReduce; MPI; Sequencing

Indexed keywords

ALU SEQUENCES; CENSUS DATA; DATA EXPLORATION; DATA-INTENSIVE COMPUTING; DETERMINISTIC ANNEALING; ELECTRONIC RECORDS; END TO END; EXPONENTIAL GROWTH; GENE SEQUENCES; HIGH-DIMENSION DATA; INDIANAPOLIS; MEDICAL INFORMATION; MULTI-DIMENSIONAL SCALING; NATURAL PROGRAMMING; NEW INSTRUMENT; PATIENT RECORD; SMITH-WATERMAN;

EID: 71749108366     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-10665-1_2     Document Type: Conference Paper
Times cited : (19)

References (36)
  • 1
    • 0032202775 scopus 로고    scopus 로고
    • Rose, K.: Deterministic Annealing for Clustering, Compression, Classification, Regression, and Related Optimization Problems. Proceedings of the IEEE 80, 2210-2239 (1998)
    • Rose, K.: Deterministic Annealing for Clustering, Compression, Classification, Regression, and Related Optimization Problems. Proceedings of the IEEE 80, 2210-2239 (1998)
  • 3
    • 0033882729 scopus 로고    scopus 로고
    • Data visualization by multidimensional scaling: A deterministic annealing approach
    • Klock, H., Buhmann, J.M.: Data visualization by multidimensional scaling: a deterministic annealing approach. Pattern Recognition 33(4), 651-669 (2000)
    • (2000) Pattern Recognition , vol.33 , Issue.4 , pp. 651-669
    • Klock, H.1    Buhmann, J.M.2
  • 6
    • 33947113750 scopus 로고    scopus 로고
    • Green neighborhoods, food retail, and childhood overweight: Differences by population density
    • 2007
    • Liu, G., Wilson, J., Rong, Q., Ying, J.: Green neighborhoods, food retail, and childhood overweight: differences by population density. American Journal of Health Promotion 21(I4 suppl.), 317-325 (2007)
    • American Journal of Health Promotion , vol.21 , Issue.I4 SUPPL. , pp. 317-325
    • Liu, G.1    Wilson, J.2    Rong, Q.3    Ying, J.4
  • 7
    • 71749113862 scopus 로고    scopus 로고
    • Examining Urban Environment Correlates of Childhood Physical Activity and Walkability Perception with GIS and Remote Sensing
    • 2nd edn, pp, Springer, Berlin
    • Liu, G., et al.: Examining Urban Environment Correlates of Childhood Physical Activity and Walkability Perception with GIS and Remote Sensing. In: Geo-spatial Technologies in Urban Environments Policy, Practice, and Pixels, 2nd edn., pp. 121-140. Springer, Berlin (2007)
    • (2007) Geo-spatial Technologies in Urban Environments Policy, Practice, and Pixels , pp. 121-140
    • Liu, G.1
  • 9
    • 10044285992 scopus 로고    scopus 로고
    • Canonical correlation analysis: An overview with application to learning methods
    • Hardoon, D., et al.: Canonical correlation analysis: an overview with application to learning methods. Neural Computation 16(12), 2639-2664 (2004)
    • (2004) Neural Computation , vol.16 , Issue.12 , pp. 2639-2664
    • Hardoon, D.1
  • 11
    • 48849089104 scopus 로고    scopus 로고
    • High-performance implementation of the level-3 blas
    • Goto, K., Van De Geijn, R.: High-performance implementation of the level-3 blas. ACM Trans. Math. Softw. 35(1), 1-14 (2008)
    • (2008) ACM Trans. Math. Softw , vol.35 , Issue.1 , pp. 1-14
    • Goto, K.1    Van De Geijn, R.2
  • 13
    • 0036250811 scopus 로고    scopus 로고
    • Alu repeats and human genomic diversity
    • Batzer, M.A., Deininger, P.L.: Alu repeats and human genomic diversity. Nat. Rev. Genet. 3(5), 370-379 (2002)
    • (2002) Nat. Rev. Genet , vol.3 , Issue.5 , pp. 370-379
    • Batzer, M.A.1    Deininger, P.L.2
  • 14
    • 71749104562 scopus 로고    scopus 로고
    • Smit, A.F.A., Hubley, R., Green, P.: Repeatmasker (2004), http://www.repeatmasker.org
    • Smit, A.F.A., Hubley, R., Green, P.: Repeatmasker (2004), http://www.repeatmasker.org
  • 15
    • 0034284437 scopus 로고    scopus 로고
    • Repbase Update: A database and electronic journal of repetitive elements
    • Jurka, J.: Repbase Update: a database and electronic journal of repetitive elements. Trends Genet. 9, 418-420 (2000)
    • (2000) Trends Genet , vol.9 , pp. 418-420
    • Jurka, J.1
  • 17
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith, T.F., Waterman, M.S.: Identification of common molecular subsequences. Journal of Molecular Biology 147, 195-197 (1981)
    • (1981) Journal of Molecular Biology , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 18
    • 0020484488 scopus 로고
    • An improved algorithm for matching biological sequences
    • Gotoh, O.: An improved algorithm for matching biological sequences. J. of Molecular Biology 162, 705-708 (1982)
    • (1982) J. of Molecular Biology , vol.162 , pp. 705-708
    • Gotoh, O.1
  • 20
    • 71749105179 scopus 로고
    • The Solution of the Metric STRESS and SSTRESS Problems in Multidimensional Scaling Using Newton's Method
    • Kearsley, A.J., Tapia, R.A., Trosset, M.W.: The Solution of the Metric STRESS and SSTRESS Problems in Multidimensional Scaling Using Newton's Method, technical report (1995)
    • (1995) technical report
    • Kearsley, A.J.1    Tapia, R.A.2    Trosset, M.W.3
  • 21
    • 47749085519 scopus 로고    scopus 로고
    • Parallel Clustering and Dimensional Scaling on Multicore System
    • Bubak, M, van Albada, G.D, Dongarra, J, Sloot, P.M.A, eds, ICCS 2008, Part I, Springer, Heidelberg
    • Qiu, X., Fox, G.C., Yuan, H., Bae, S.-H., Chrysanthakopoulos, G., Nielsen, H.F.: Parallel Clustering and Dimensional Scaling on Multicore System. In: Bubak, M., van Albada, G.D., Dongarra, J., Sloot, P.M.A. (eds.) ICCS 2008, Part I. LNCS, vol. 5101, pp. 407-416. Springer, Heidelberg (2008)
    • (2008) LNCS , vol.5101 , pp. 407-416
    • Qiu, X.1    Fox, G.C.2    Yuan, H.3    Bae, S.-H.4    Chrysanthakopoulos, G.5    Nielsen, H.F.6
  • 22
    • 71749117595 scopus 로고    scopus 로고
    • Frederickson, K.E.: Enhanced Local Coordination and Collaboration through the Social Assets and Vulnerabilities Indicators (SAVI) Project. In: Proceedings of the American Public Health Association Annual Conference, Washington, D.C (1998)
    • Frederickson, K.E.: Enhanced Local Coordination and Collaboration through the Social Assets and Vulnerabilities Indicators (SAVI) Project. In: Proceedings of the American Public Health Association Annual Conference, Washington, D.C (1998)
  • 24
    • 0002294480 scopus 로고    scopus 로고
    • Social integration, social networks, social support, and health
    • Berkman, L.F, Kawachi, I, eds, Oxford University Press, New York
    • Berkman, L.F., Glass, T.: Social integration, social networks, social support, and health. In: Berkman, L.F., Kawachi, I. (eds.) Social Epidemiology, pp. 137-173. Oxford University Press, New York (2000)
    • (2000) Social Epidemiology , pp. 137-173
    • Berkman, L.F.1    Glass, T.2
  • 25
    • 0002658120 scopus 로고    scopus 로고
    • Poverty, social exclusion, and minorities
    • Marmot, M, Wilkinson, R.G, eds, 2nd edn, pp, Oxford University Press, New York
    • Shaw, M., Dorling, D., Smith, G.D.: Poverty, social exclusion, and minorities. In: Marmot, M., Wilkinson, R.G. (eds.) Social Determinants of Health, 2nd edn., pp. 196-223. Oxford University Press, New York (2006)
    • (2006) Social Determinants of Health , pp. 196-223
    • Shaw, M.1    Dorling, D.2    Smith, G.D.3
  • 26
    • 0003192581 scopus 로고    scopus 로고
    • A historical framework for social epidemiology
    • Berkman, L.F, Kawachi, I, eds, Oxford Univ. Press, New York
    • Berkman, L.F., Kawachi, I.: A historical framework for social epidemiology. In: Berkman, L.F., Kawachi, I. (eds.) Social Epidemiology, pp. 3-12. Oxford Univ. Press, New York (2000)
    • (2000) Social Epidemiology , pp. 3-12
    • Berkman, L.F.1    Kawachi, I.2
  • 27
    • 0013025283 scopus 로고    scopus 로고
    • Kawachi, I, Berkman, L.F, eds, Oxford University Press, New York
    • Kawachi, I., Berkman, L.F. (eds.): Neighborhoods and Health. Oxford University Press, New York (2003)
    • (2003) Neighborhoods and Health
  • 28
    • 0032017868 scopus 로고    scopus 로고
    • Community-level socioeconomic status effects on adult health
    • Robert, S.: Community-level socioeconomic status effects on adult health. Journal of Health and Social Behavior 39, 18-37 (1998)
    • (1998) Journal of Health and Social Behavior , vol.39 , pp. 18-37
    • Robert, S.1
  • 31
    • 34548041192 scopus 로고    scopus 로고
    • Isard, M., Budiu, M., Yu, Y., Birrell, A., Fetterly, D.: Dryad: Distributed data-parallel programs from sequential building blocks. In: European Conference on Computer Systems (March 2007)
    • Isard, M., Budiu, M., Yu, Y., Birrell, A., Fetterly, D.: Dryad: Distributed data-parallel programs from sequential building blocks. In: European Conference on Computer Systems (March 2007)
  • 32
    • 84869665559 scopus 로고    scopus 로고
    • Yu, Y., Isard, M., Fetterly, D., Budiu, M., Erlingsson, Ú., Gunda, P., Currey, J.: DryadLINQ: A System for General-Purpose Distributed Data-Parallel Computing Using a High-Level Language. In: Symposium on Operating System Design and Implementation (OSDI), CA, December 8-10 (2008)
    • Yu, Y., Isard, M., Fetterly, D., Budiu, M., Erlingsson, Ú., Gunda, P., Currey, J.: DryadLINQ: A System for General-Purpose Distributed Data-Parallel Computing Using a High-Level Language. In: Symposium on Operating System Design and Implementation (OSDI), CA, December 8-10 (2008)
  • 33
    • 84870452716 scopus 로고    scopus 로고
    • Apache Hadoop, http://hadoop.apache.org/core/
    • Apache Hadoop
  • 34
    • 71749089500 scopus 로고    scopus 로고
    • Ekanayake, J., Qiu, X., Gunarathne, T., Beason, S., Fox, G.: High Performance Parallel Computing with Clouds and Cloud Technologies (August 25, 2009) (to be published as book chapter), http://grids.ucs.indiana.edu/ ptliupages/publications/cloud-handbook-final-with-diagrams.pdf
    • Ekanayake, J., Qiu, X., Gunarathne, T., Beason, S., Fox, G.: High Performance Parallel Computing with Clouds and Cloud Technologies (August 25, 2009) (to be published as book chapter), http://grids.ucs.indiana.edu/ ptliupages/publications/cloud-handbook-final-with-diagrams.pdf
  • 35
    • 84869681817 scopus 로고    scopus 로고
    • High Performance Parallel Computing with Clouds and Cloud Technologies
    • Jaatun, M.G, Zhao, G, Rong, C, eds, CloudCom 2009, Springer, Heidelberg
    • Ekanayake, J., Fox, G.: High Performance Parallel Computing with Clouds and Cloud Technologies. In: Jaatun, M.G., Zhao, G., Rong, C. (eds.) CloudCom 2009. LNCS, vol. 5931, Springer, Heidelberg (2009), http://grids.ucs.indiana. edu/ptliupages/publications/cloudcomp-camera-ready.pdf
    • (2009) LNCS , vol.5931
    • Ekanayake, J.1    Fox, G.2
  • 36
    • 47749085519 scopus 로고    scopus 로고
    • Parallel Clustering And Dimensional Scaling on Multicore Systems
    • Bubak, M, van Albada, G.D, Dongarra, J, Sloot, P.M.A, eds, ICCS 2008, Part I, Springer, Heidelberg
    • Qiu, X., Fox, G.C., Yuan, H., Bae, S.-H., Chrysanthakopoulos, G., Nielsen, H.F.: Parallel Clustering And Dimensional Scaling on Multicore Systems. In: Bubak, M., van Albada, G.D., Dongarra, J., Sloot, P.M.A. (eds.) ICCS 2008, Part I. LNCS, vol. 5101, pp. 407-416. Springer, Heidelberg (2008), http://grids.ucs.indiana.edu/ptliupages/publications/hpcsApril12-08.pdf
    • (2008) LNCS , vol.5101 , pp. 407-416
    • Qiu, X.1    Fox, G.C.2    Yuan, H.3    Bae, S.-H.4    Chrysanthakopoulos, G.5    Nielsen, H.F.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.