메뉴 건너뛰기




Volumn 147, Issue 1, 2010, Pages 53-59

Effect of reaction conditions and 3AB on the mutation rate of poliovirus RNA-dependent RNA polymerase in a α-complementation assay

Author keywords

3AB; 3Dpol; Mutation rate; Poliovirus; RNA dependent RNA polymerase

Indexed keywords

BETA GALACTOSIDASE; MAGNESIUM CHLORIDE; MANGANESE CHLORIDE; PROTEIN 3AB; RNA DIRECTED DNA POLYMERASE; RNA DIRECTED RNA POLYMERASE; UNCLASSIFIED DRUG; VIRUS DNA; VIRUS PROTEIN; VIRUS RNA;

EID: 71149094861     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2009.10.006     Document Type: Article
Times cited : (3)

References (36)
  • 1
    • 57349131683 scopus 로고    scopus 로고
    • Determinants of RNA-dependent RNA polymerase (in)fidelity revealed by kinetic analysis of the polymerase encoded by a foot-and-mouth disease virus mutant with reduced sensitivity to ribavirin
    • Arias A., Arnold J.J., Sierra M., Smidansky E.D., Domingo E., and Cameron C.E. Determinants of RNA-dependent RNA polymerase (in)fidelity revealed by kinetic analysis of the polymerase encoded by a foot-and-mouth disease virus mutant with reduced sensitivity to ribavirin. J. Virol. 82 24 (2008) 12346-12355
    • (2008) J. Virol. , vol.82 , Issue.24 , pp. 12346-12355
    • Arias, A.1    Arnold, J.J.2    Sierra, M.3    Smidansky, E.D.4    Domingo, E.5    Cameron, C.E.6
  • 2
    • 0033601209 scopus 로고    scopus 로고
    • Poliovirus RNA-dependent RNA polymerase (3D(pol)). Divalent cation modulation of primer, template, and nucleotide selection
    • Arnold J.J., Ghosh S.K., and Cameron C.E. Poliovirus RNA-dependent RNA polymerase (3D(pol)). Divalent cation modulation of primer, template, and nucleotide selection. J. Biol. Chem. 274 52 (1999) 37060-37069
    • (1999) J. Biol. Chem. , vol.274 , Issue.52 , pp. 37060-37069
    • Arnold, J.J.1    Ghosh, S.K.2    Cameron, C.E.3
  • 3
    • 0024438889 scopus 로고
    • Specificity and mechanism of error prone replication by human immunodeficiency virus 1 reverse transcriptase
    • Bebenek K., Abbotts J., Roberts J.D., Wilson S.H., and Kunkel T.A. Specificity and mechanism of error prone replication by human immunodeficiency virus 1 reverse transcriptase. J. Biol. Chem. 264 (1989) 16948-16956
    • (1989) J. Biol. Chem. , vol.264 , pp. 16948-16956
    • Bebenek, K.1    Abbotts, J.2    Roberts, J.D.3    Wilson, S.H.4    Kunkel, T.A.5
  • 4
    • 0028857175 scopus 로고
    • Analyzing fidelity of DNA polymerases
    • Bebenek K., and Kunkel T.A. Analyzing fidelity of DNA polymerases. Methods Enzymol. 262 (1995) 217-232
    • (1995) Methods Enzymol. , vol.262 , pp. 217-232
    • Bebenek, K.1    Kunkel, T.A.2
  • 5
    • 0029838387 scopus 로고    scopus 로고
    • Analyzing the fidelity of reverse transcription and transcription
    • Boyer J.C., Bebenek K., and Kunkel T.A. Analyzing the fidelity of reverse transcription and transcription. Methods Enzymol. 275 (1996) 523-537
    • (1996) Methods Enzymol. , vol.275 , pp. 523-537
    • Boyer, J.C.1    Bebenek, K.2    Kunkel, T.A.3
  • 6
    • 0026778009 scopus 로고
    • Unequal human immunodeficiency virus type 1 reverse transcriptase error rates with RNA and DNA templates
    • Boyer J.C., Bebenek K., and Kunkel T.A. Unequal human immunodeficiency virus type 1 reverse transcriptase error rates with RNA and DNA templates. Proc. Natl. Acad. Sci. U.S.A. 89 15 (1992) 6919-6923
    • (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , Issue.15 , pp. 6919-6923
    • Boyer, J.C.1    Bebenek, K.2    Kunkel, T.A.3
  • 7
    • 0035811016 scopus 로고    scopus 로고
    • RNA virus error catastrophe: direct molecular test by using ribavirin
    • Crotty S., Cameron C.E., and Andino R. RNA virus error catastrophe: direct molecular test by using ribavirin. Proc. Natl. Acad. Sci. U.S.A. 98 12 (2001) 6895-6900
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , Issue.12 , pp. 6895-6900
    • Crotty, S.1    Cameron, C.E.2    Andino, R.3
  • 8
    • 0025044516 scopus 로고
    • Very high frequency of reversion to guanidine resistant in clonal pools of guanidine-dependent type 1 Poliovirus
    • De la Torre J.C., Wimmer E., and Holland J.J. Very high frequency of reversion to guanidine resistant in clonal pools of guanidine-dependent type 1 Poliovirus. J. Virol. 64 2 (1990) 664-671
    • (1990) J. Virol. , vol.64 , Issue.2 , pp. 664-671
    • De la Torre, J.C.1    Wimmer, E.2    Holland, J.J.3
  • 9
    • 0031915129 scopus 로고    scopus 로고
    • High fidelity of internal strand transfer catalyzed by human immunodeficiency virus reverse transcriptase
    • DeStefano J., Ghosh J., Prasad B., and Raja A. High fidelity of internal strand transfer catalyzed by human immunodeficiency virus reverse transcriptase. J. Biol. Chem. 273 3 (1998) 1483-1489
    • (1998) J. Biol. Chem. , vol.273 , Issue.3 , pp. 1483-1489
    • DeStefano, J.1    Ghosh, J.2    Prasad, B.3    Raja, A.4
  • 10
    • 32444439218 scopus 로고    scopus 로고
    • Poliovirus protein 3AB displays nucleic acid chaperone and helix-destabilizing activities
    • DeStefano J.J., and Titilope O. Poliovirus protein 3AB displays nucleic acid chaperone and helix-destabilizing activities. J. Virol. 80 4 (2006) 1662-1671
    • (2006) J. Virol. , vol.80 , Issue.4 , pp. 1662-1671
    • DeStefano, J.J.1    Titilope, O.2
  • 13
    • 34347393144 scopus 로고    scopus 로고
    • Biochemical characterization of the fidelity of poliovirus RNA-dependent RNA polymerase
    • Freistadt M.S., Vaccaro J.A., and Eberle K.E. Biochemical characterization of the fidelity of poliovirus RNA-dependent RNA polymerase. Virol. J. 4 (2007) 44
    • (2007) Virol. J. , vol.4 , pp. 44
    • Freistadt, M.S.1    Vaccaro, J.A.2    Eberle, K.E.3
  • 14
    • 0001568559 scopus 로고
    • Replication error, quasispecies populations, and extreme evolution rates of RNA viruses
    • Morse S. (Ed), Oxford University Press, New York
    • Holland J.J. Replication error, quasispecies populations, and extreme evolution rates of RNA viruses. In: Morse S. (Ed). Emerging Viruses (1993), Oxford University Press, New York 203-218
    • (1993) Emerging Viruses , pp. 203-218
    • Holland, J.J.1
  • 15
    • 0030732120 scopus 로고    scopus 로고
    • Genetic dissection of interaction between poliovirus 3D polymerase and viral protein 3AB
    • Hope D.A., Diamond S.E., and Kirkegaard K. Genetic dissection of interaction between poliovirus 3D polymerase and viral protein 3AB. J. Virol. 71 12 (1997) 9490-9498
    • (1997) J. Virol. , vol.71 , Issue.12 , pp. 9490-9498
    • Hope, D.A.1    Diamond, S.E.2    Kirkegaard, K.3
  • 16
    • 0026623162 scopus 로고
    • Poliovirus RNA recombination: mechanistic studies in the absence of selection
    • Jarvis T.C., and Kirkegaard K. Poliovirus RNA recombination: mechanistic studies in the absence of selection. EMBO J. 11 8 (1992) 3135-3145
    • (1992) EMBO J. , vol.11 , Issue.8 , pp. 3135-3145
    • Jarvis, T.C.1    Kirkegaard, K.2
  • 17
    • 0028289584 scopus 로고
    • Fidelity of HIV-1 reverse transcriptase copying a hypervariable region of the HIV-1 env gene
    • Ji J., and Loeb L.A. Fidelity of HIV-1 reverse transcriptase copying a hypervariable region of the HIV-1 env gene. Virology 199 2 (1994) 323-330
    • (1994) Virology , vol.199 , Issue.2 , pp. 323-330
    • Ji, J.1    Loeb, L.A.2
  • 18
    • 0026536430 scopus 로고
    • Fidelity of HIV-1 reverse transcriptase copying RNA in vitro
    • Ji J.P., and Loeb L.A. Fidelity of HIV-1 reverse transcriptase copying RNA in vitro. Biochemistry 31 4 (1992) 954-958
    • (1992) Biochemistry , vol.31 , Issue.4 , pp. 954-958
    • Ji, J.P.1    Loeb, L.A.2
  • 19
    • 0021872030 scopus 로고
    • The mutational specificity of DNA polymerase-beta during in vitro DNA synthesis. Production of frameshift, base substitution, and deletion mutations
    • Kunkel T.A. The mutational specificity of DNA polymerase-beta during in vitro DNA synthesis. Production of frameshift, base substitution, and deletion mutations. J. Biol. Chem. 260 9 (1985) 5787-5796
    • (1985) J. Biol. Chem. , vol.260 , Issue.9 , pp. 5787-5796
    • Kunkel, T.A.1
  • 20
    • 0029057801 scopus 로고
    • Role of 3AB protein in poliovirus genome replication
    • Lama J., Sanz M.A., and Rodriguez P.L. Role of 3AB protein in poliovirus genome replication. J. Biol. Chem. 270 24 (1995) 14430-14438
    • (1995) J. Biol. Chem. , vol.270 , Issue.24 , pp. 14430-14438
    • Lama, J.1    Sanz, M.A.2    Rodriguez, P.L.3
  • 21
    • 23144448275 scopus 로고    scopus 로고
    • Nucleic acid chaperone activity of HIV-1 nucleocapsid protein: critical role in reverse transcription and molecular mechanism
    • Levin J.G., Guo J., Rouzina I., and Musier-Forsyth K. Nucleic acid chaperone activity of HIV-1 nucleocapsid protein: critical role in reverse transcription and molecular mechanism. Prog. Nucleic Acid Res. Mol. Biol. 80 (2005) 217-286
    • (2005) Prog. Nucleic Acid Res. Mol. Biol. , vol.80 , pp. 217-286
    • Levin, J.G.1    Guo, J.2    Rouzina, I.3    Musier-Forsyth, K.4
  • 22
    • 0022477122 scopus 로고
    • Measurement of the mutation rates in animal viruses: Influenza A virus and Poliovirus type 1
    • Parvin J.D., Moscona A., Pan W.T., Leider J.M., and Palese P. Measurement of the mutation rates in animal viruses: Influenza A virus and Poliovirus type 1. J. Virol. 59 2 (1986) 377-383
    • (1986) J. Virol. , vol.59 , Issue.2 , pp. 377-383
    • Parvin, J.D.1    Moscona, A.2    Pan, W.T.3    Leider, J.M.4    Palese, P.5
  • 23
    • 0028152526 scopus 로고
    • Studies with poliovirus polymerase 3Dpol. Stimulation of poly(U) synthesis in vitro by purified poliovirus protein 3AB
    • Paul A.V., Cao X., Harris K.S., Lama J., and Wimmer E. Studies with poliovirus polymerase 3Dpol. Stimulation of poly(U) synthesis in vitro by purified poliovirus protein 3AB. J. Biol. Chem. 269 46 (1994) 29173-29181
    • (1994) J. Biol. Chem. , vol.269 , Issue.46 , pp. 29173-29181
    • Paul, A.V.1    Cao, X.2    Harris, K.S.3    Lama, J.4    Wimmer, E.5
  • 24
    • 0033766003 scopus 로고    scopus 로고
    • Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg
    • Paul A.V., Rieder E., Kim D.W., van Boom J.H., and Wimmer E. Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg. J. Virol. 74 22 (2000) 10359-10370
    • (2000) J. Virol. , vol.74 , Issue.22 , pp. 10359-10370
    • Paul, A.V.1    Rieder, E.2    Kim, D.W.3    van Boom, J.H.4    Wimmer, E.5
  • 26
    • 0024495371 scopus 로고
    • Purification and properties of poliovirus RNA polymerase expressed in Escherichia coli
    • Plotch S.J., Palant O., and Gluzman Y. Purification and properties of poliovirus RNA polymerase expressed in Escherichia coli. J. Virol. 63 1 (1989) 216-225
    • (1989) J. Virol. , vol.63 , Issue.1 , pp. 216-225
    • Plotch, S.J.1    Palant, O.2    Gluzman, Y.3
  • 27
    • 0024273119 scopus 로고
    • The accuracy of reverse transcriptase from HIV-1
    • Roberts J.D., Bebenek K., and Kunkel T.A. The accuracy of reverse transcriptase from HIV-1. Science 242 4882 (1988) 1171-1173
    • (1988) Science , vol.242 , Issue.4882 , pp. 1171-1173
    • Roberts, J.D.1    Bebenek, K.2    Kunkel, T.A.3
  • 28
    • 0035394798 scopus 로고    scopus 로고
    • Primer-dependent synthesis by poliovirus RNA-dependent RNA polymerase (3D(pol))
    • Rodriguez-Wells V., Plotch S.J., and DeStefano J.J. Primer-dependent synthesis by poliovirus RNA-dependent RNA polymerase (3D(pol)). Nucleic Acids Res. 29 13 (2001) 2715-2724
    • (2001) Nucleic Acids Res. , vol.29 , Issue.13 , pp. 2715-2724
    • Rodriguez-Wells, V.1    Plotch, S.J.2    DeStefano, J.J.3
  • 30
    • 0037785142 scopus 로고    scopus 로고
    • Towards an understanding of the poliovirus replication complex: the solution structure of the soluble domain of the poliovirus 3A protein
    • Strauss D.M., Glustrom L.W., and Wuttke D.S. Towards an understanding of the poliovirus replication complex: the solution structure of the soluble domain of the poliovirus 3A protein. J. Mol. Biol. 330 2 (2003) 225-234
    • (2003) J. Mol. Biol. , vol.330 , Issue.2 , pp. 225-234
    • Strauss, D.M.1    Glustrom, L.W.2    Wuttke, D.S.3
  • 31
    • 0030966487 scopus 로고    scopus 로고
    • Mutations in the SIV env and the M13 lacZ-α gene generated in vitro by reverse trancriptases and DNA polymerases
    • Stuke A.W., Ahmad-Omar O., Hoefer K., Hundmann G., and Jentsch K.D. Mutations in the SIV env and the M13 lacZ-α gene generated in vitro by reverse trancriptases and DNA polymerases. Arch. Virol. 142 (1997) 1139-1154
    • (1997) Arch. Virol. , vol.142 , pp. 1139-1154
    • Stuke, A.W.1    Ahmad-Omar, O.2    Hoefer, K.3    Hundmann, G.4    Jentsch, K.D.5
  • 32
    • 0023857260 scopus 로고
    • Direct measurement of the Poliovirus polymerase error frequency in vitro
    • Ward C.D., Stokes M.A., and Flanegan J.B. Direct measurement of the Poliovirus polymerase error frequency in vitro. J. Virol. 66 2 (1988) 558-562
    • (1988) J. Virol. , vol.66 , Issue.2 , pp. 558-562
    • Ward, C.D.1    Stokes, M.A.2    Flanegan, J.B.3
  • 33
    • 0024507160 scopus 로고
    • Fidelity of human immunodeficiency virus type I reverse transcriptase in copying natural DNA
    • Weber J., and Grosse F. Fidelity of human immunodeficiency virus type I reverse transcriptase in copying natural DNA. Nucleic Acids Res. 17 4 (1989) 1379-1393
    • (1989) Nucleic Acids Res. , vol.17 , Issue.4 , pp. 1379-1393
    • Weber, J.1    Grosse, F.2
  • 34
    • 0035111233 scopus 로고    scopus 로고
    • Determination of the mutation rate of poliovirus RNA-dependent RNA polymerase
    • Wells V.R., Plotch S.J., and DeStefano J.J. Determination of the mutation rate of poliovirus RNA-dependent RNA polymerase. Virus Res. 74 1-2 (2001) 119-132
    • (2001) Virus Res. , vol.74 , Issue.1-2 , pp. 119-132
    • Wells, V.R.1    Plotch, S.J.2    DeStefano, J.J.3
  • 35
    • 0031947053 scopus 로고    scopus 로고
    • Complete protein linkage map of poliovirus P3 proteins: interaction of polymerase 3Dpol with VPg and with genetic variants of 3AB
    • Xiang W., Cuconati A., Hope D., Kirkegaard K., and Wimmer E. Complete protein linkage map of poliovirus P3 proteins: interaction of polymerase 3Dpol with VPg and with genetic variants of 3AB. J. Virol. 72 8 (1998) 6732-6741
    • (1998) J. Virol. , vol.72 , Issue.8 , pp. 6732-6741
    • Xiang, W.1    Cuconati, A.2    Hope, D.3    Kirkegaard, K.4    Wimmer, E.5
  • 36
    • 0029398842 scopus 로고
    • Molecular dissection of the multifunctional poliovirus RNA-binding protein 3AB
    • Xiang W., Cuconati A., Paul A.V., Cao X., and Wimmer E. Molecular dissection of the multifunctional poliovirus RNA-binding protein 3AB. RNA 1 9 (1995) 892-904
    • (1995) RNA , vol.1 , Issue.9 , pp. 892-904
    • Xiang, W.1    Cuconati, A.2    Paul, A.V.3    Cao, X.4    Wimmer, E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.