VIP1 response elements mediate mitogen-activated protein kinase 3-induced stress gene expression

Proceedings of the National Academy of Sciences of the United States of America

Volumn 106, Issue 43, 2009, Pages 18414-18419

  Pitzschke, Andrea ^a   Djamei, Armin ^a,c   Teige, Markus ^a   Hirt, Heribert ^a,b  

^a UNIVERSITY OF VIENNA   (Austria)

^b INSTITUTE OF PLANT SCIENCES PARIS SACLAY IPS2   (France)

^c MAX PLANCK INSTITUTE FOR TERRESTRIAL MICROBIOLOGY   (Germany)

Author keywords

Arabidopsis; bZIP; Promoter motif; Signal propagation; Transcription factor

Indexed keywords

BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR; DNA; MITOGEN ACTIVATED PROTEIN KINASE 3; SCAFFOLD PROTEIN; UNCLASSIFIED DRUG; VASOACTIVE INTESTINAL POLYPEPTIDE; VIRE2 INTERACTING PROTEIN 1;

ARTICLE; BASIC LEUCINE ZIPPER MOTIF; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DNA RESPONSIVE ELEMENT; ENZYME ACTIVATION; ENZYME PHOSPHORYLATION; GEL MOBILITY SHIFT ASSAY; GENE ACTIVATION; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENE INDUCTION; GENE OVEREXPRESSION; GENE TARGETING; MUTANT; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING; PROTEIN MOTIF; SIGNAL TRANSDUCTION; TRANSCRIPTION REGULATION;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; BINDING SITES; CHROMATIN IMMUNOPRECIPITATION; GENE EXPRESSION REGULATION, PLANT; MAP KINASE SIGNALING SYSTEM; MITOGEN-ACTIVATED PROTEIN KINASE 3; PROTEIN BINDING; RESPONSE ELEMENTS; STRESS, PHYSIOLOGICAL; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

AGROBACTERIUM; AGROBACTERIUM TUMEFACIENS; ARABIDOPSIS;

EID: 70849094968     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0905599106     Document Type: Article

References (34)

1. Tzfira T, Vaidya M, Citovsky V (2001) VIP1, an Arabidopsis protein that interacts with Agrobacterium VirE2, is involved in VirE2 nuclear import and Agrobacterium infectivity. EMBO J 20:3596-3607. (Pubitemid 32634366)
2. Djamei A, Pitzschke A, Nakagami H, Rajh I, Hirt H (2007) Trojan horse strategy in Agrobacterium transformation: Abusing MAPK defense signaling. Science 318:453-456. (Pubitemid 47614531)
3. Nakagami H, Pitzschke A, Hirt H (2005) Emerging MAP kinase pathways in plant stress signalling. Trends Plants Sci 10:339-346. (Pubitemid 40912457)
4. Li J, Krichevsky A, Vaidya M, Tzfira T, Citovsky V (2005) Uncoupling of the functions of the Arabidopsis VIP1 protein in transient and stable plant genetic transformation by Agrobacterium. Proc Natl Acad Sci USA 102:5733-5738. (Pubitemid 40559628)
5. Jakoby M, et al. (2002) bZIP transcription factors in Arabidopsis. Trends Plants Sci 7:106-111.
6. Fukazawa J, et al. (2000) Repression of shoot growth, a bZIP transcriptional activator, regulates cell elongation by controlling the level of gibberellins. Plant Cell 12:901-915. (Pubitemid 30458036)
7. Aukerman MJ, Schmidt RJ, Burr B, Burr FA (1991) An arginine to lysine substitution in the bZIP domain of an opaque-2 mutant in maize abolishes specific DNA binding. Genes Dev 5:310-320. (Pubitemid 21905955)
8. Johnson C, Boden E, Arias J (2003) Salicylic acid and NPR1 induce the recruitment of transactivating TGA factors to a defense gene promoter in Arabidopsis. Plant Cell 15:1846-1858. (Pubitemid 37078339)
9. Weltmeier F, et al. (2006) Combinatorial control of Arabidopsis proline dehydrogenase transcription by specific heterodimerisation of bZIP transcription factors. EMBO J 25:3133-3143. (Pubitemid 44106764)
10. Deppmann CD, Alvania RS, Taparowsky EJ (2006) Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks. Mol Biol Evol 23:1480-1492.
11. Ringli C, Keller B (1998) Specific interaction of the tomato bZIP transcription factor VSF-1 with a non-palindromic DNA sequence that controls vascular gene expression. Plant Mol Biol 37:977-988. (Pubitemid 28351437)
12. Foster R, Izawa T, Chua N (1994) Plant bZIP proteins gather at ACGT elements. FASEB J 8:192-200. (Pubitemid 24067142)
13. Pitzschke A, Hirt H (2009) Disentangling the complexity of mitogen-activated protein kinases and reactive oxygen species signaling. Plant Physiol 149:606-615.
14. Feilner T, et al. (2005) High throughput identification of potential Arabidopsis mitogen-activated protein kinases substrates. Mol Cell Proteomics 4:1558-1568. (Pubitemid 41555480)
15. Popescu SC, et al. (2009) MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Genes Dev 23:80-92.
16. Caselle M, Di Cunto F, Provero P (2002) Correlating overrepresented upstream motifs to gene expression: A computational approach to regulatory element discovery in eukaryotes. BMC Bioinformatics 3:7. (Pubitemid 38751197)
17. Navarro L, et al. (2004) The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. Plant Physiol 135:1113-1128. (Pubitemid 38819053)
18. Delessert C, Wilson IW, Van Der Straeten D, Dennis ES, Dolferus R (2004) Spatial and temporal analysis of the local response to wounding in Arabidopsis leaves. Plant Mol Biol 55:165-181.
19. Kreps JA, et al. (2002) Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. Plant Physiol 130:2129-2141. (Pubitemid 36035209)
20. Ma S, Bohnert HJ (2007) Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. Genome Biol 8:R49. (Pubitemid 351859213)
21. Kant P, et al. (2008) Functional-genomics-based identification of genes that regulate Arabidopsis responses to multiple abiotic stresses. Plant Cell Environ 31:697-714. (Pubitemid 351667672)
22. Ulm R, et al. (2002) Distinct regulation of salinity and genotoxic stress responses by Arabidopsis MAP kinase phosphatase 1. EMBO J 21:6483-6493. (Pubitemid 35448426)
23. Becker JD, Boavida LC, Carneiro J, Haury M, Feijo JA (2003) Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. Plant Physiol 133:713-725. (Pubitemid 37325681)
24. Goda H, et al. (2008) The AtGenExpress hormone and chemical treatment dataset: Experimental design, data evaluation, model data analysis and data access. Plant J 55:526-542. (Pubitemid 352033349)
25. Livaja M, Zeidler D, von Rad U, Durner J (2008) Transcriptional responses of Arabidopsis thaliana to the bacteria-derived PAMPs harpin and lipopolysaccharide. Immunobiology 213:161-171.
26. Gust AA, et al. (2007) Bacteria-derived peptidoglycans constitute pathogen-associated molecular patterns triggering innate immunity in Arabidopsis. J Biol Chem 282:32338-32348.
27. Gadjev I, et al. (2006) Transcriptomic footprints disclose specificity of reactive oxygen species signaling in Arabidopsis. Plant Physiol 141:436-445. (Pubitemid 43974538)
28. Suzuki M, Ketterling MG, McCarty DR (2005) Quantitative statistical analysis of cis-regulatory sequences in ABA/VP1- and CBF/DREB1-regulated genes of Arabidopsis. Plant Physiol 139:437-447. (Pubitemid 43951626)
29. Johnson LM, Cao X, Jacobsen SE (2002) Interplay between two epigenetic marks: DNA methylation and histone H3 lysine 9 methylation. Curr Biol 12:1360-1367. (Pubitemid 34915537)
30. Chen C, Chen Z (2002) Potentiation of developmentally regulated plant defense response by AtWRKY18, a pathogen-induced Arabidopsis transcription factor. Plant Physiol 129:706-716. (Pubitemid 34689157)
31. Chung KM, Sano H (2007) Transactivation of wound-responsive genes containing the core sequence of the auxin-responsive element by a wound-induced protein kinase-activated transcription factor in tobacco plants. Plant Mol Biol 65:763-773.
32. Avivi Y, et al. (2004) Reorganization of specific chromosomal domains and activation of silent genes in plant cells acquiring pluripotentiality. Dev Dyn 230:12-22. (Pubitemid 38544069)
33. Veena, Jiang H, Doerge RW, Gelvin SB (2003) Transfer of T-DNA and Vir proteins to plant cells by Agrobacterium tumefaciens induces expression of host genes involved in mediating transformation and suppresses host defense gene expression. Plant J 35:219-236.
34. Tzfira T, Vaidya M, Citovsky V (2004) Involvement of targeted proteolysis in plant genetic transformation by Agrobacterium. Nature 431:87-92. (Pubitemid 39215113)