메뉴 건너뛰기




Volumn 9, Issue , 2009, Pages 177-

PCR melting profile (PCR MP) - A new tool for differentiation of Candida albicans strains

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL DNA;

EID: 70749146443     PISSN: None     EISSN: 14712334     Source Type: Journal    
DOI: 10.1186/1471-2334-9-177     Document Type: Article
Times cited : (19)

References (29)
  • 2
    • 0026737730 scopus 로고
    • Candidemia in a tertiary care hospital: epidemiology, risk factors, and predictors of mortality
    • Fraser VJ, Jones M, Dunkel J, Storfer S, Medoff G, Dunagan WC. Candidemia in a tertiary care hospital: epidemiology, risk factors, and predictors of mortality. Clin Infect Dis 1992, 15:414-421.
    • (1992) Clin Infect Dis , vol.15 , pp. 414-421
    • Fraser, V.J.1    Jones, M.2    Dunkel, J.3    Storfer, S.4    Medoff, G.5    Dunagan, W.C.6
  • 3
    • 0032912443 scopus 로고    scopus 로고
    • Distribution of Candida albicans genotypes among family members
    • 10.1016/S0732-8893(98)00100-X, 10342103
    • Mehta SK, Stevens DA, Mishra SK, Feroze F, Pierson DL. Distribution of Candida albicans genotypes among family members. Diagn Microbiol Infect Dis 1999, 34:19-25. 10.1016/S0732-8893(98)00100-X, 10342103.
    • (1999) Diagn Microbiol Infect Dis , vol.34 , pp. 19-25
    • Mehta, S.K.1    Stevens, D.A.2    Mishra, S.K.3    Feroze, F.4    Pierson, D.L.5
  • 4
    • 0036701938 scopus 로고    scopus 로고
    • Ca3 fingerprinting of Candida albicans bloodstream isolates from the United States, Canada, South America, and Europe reveals a European clade
    • 120649, 12149321, 10.1128/JCM.40.8.2729-2740.2002
    • Pujol C, Pfaller M, Soll DR. Ca3 fingerprinting of Candida albicans bloodstream isolates from the United States, Canada, South America, and Europe reveals a European clade. J Clin Microbiol 2002, 40:2729-2740. 120649, 12149321, 10.1128/JCM.40.8.2729-2740.2002.
    • (2002) J Clin Microbiol , vol.40 , pp. 2729-2740
    • Pujol, C.1    Pfaller, M.2    Soll, D.R.3
  • 5
    • 0028969437 scopus 로고
    • Evidence for nosocomial transmission of Candida albicans obtained by Ca3 fingerprinting
    • 228135, 7615732
    • Schmid J, Tay YP, Wan L, Carr M, Parr D, McKinney W. Evidence for nosocomial transmission of Candida albicans obtained by Ca3 fingerprinting. J Clin Microbiol 1995, 33:1223-1230. 228135, 7615732.
    • (1995) J Clin Microbiol , vol.33 , pp. 1223-1230
    • Schmid, J.1    Tay, Y.P.2    Wan, L.3    Carr, M.4    Parr, D.5    McKinney, W.6
  • 6
    • 0027390554 scopus 로고
    • Genetic similarity of Candida albicans strains from vaginitis patients and their partners
    • 262617, 8417030
    • Schmid J, Rotman M, Reed B, Pierson C, Soll DR. Genetic similarity of Candida albicans strains from vaginitis patients and their partners. J Clin Microbiol 1993, 31:39-46. 262617, 8417030.
    • (1993) J Clin Microbiol , vol.31 , pp. 39-46
    • Schmid, J.1    Rotman, M.2    Reed, B.3    Pierson, C.4    Soll, D.R.5
  • 7
    • 6544295270 scopus 로고    scopus 로고
    • PCR-restriction fragment length polymorphism (RFLP) analyses reveal both extensive clonality and local genetic differences in Candida albicans
    • 10.1046/j.1365-294X.1999.00523.x, 9919698
    • Xu J, Mitchell TG, Vilgalys R. PCR-restriction fragment length polymorphism (RFLP) analyses reveal both extensive clonality and local genetic differences in Candida albicans. Mol Ecol 1999, 8:59-73. 10.1046/j.1365-294X.1999.00523.x, 9919698.
    • (1999) Mol Ecol , vol.8 , pp. 59-73
    • Xu, J.1    Mitchell, T.G.2    Vilgalys, R.3
  • 8
    • 0027443425 scopus 로고
    • Comparison of PCR fingerprinting, by random amplification of polymorphic DNA, with other molecular typing methods for Candida albicans
    • Bostock A, Khattak MN, Matthews R, Burnie J. Comparison of PCR fingerprinting, by random amplification of polymorphic DNA, with other molecular typing methods for Candida albicans. J Gen Microbiol 1993, 139(9):2179-2184.
    • (1993) J Gen Microbiol , vol.139 , Issue.9 , pp. 2179-2184
    • Bostock, A.1    Khattak, M.N.2    Matthews, R.3    Burnie, J.4
  • 9
    • 16544365420 scopus 로고    scopus 로고
    • Significance of amplified fragment length polymorphism in identification and epidemiological examination of Candida species colonization in children undergoing allogeneic stem cell transplantation
    • 387556, 15071024, 10.1128/JCM.42.4.1673-1679.2004
    • Ball LM, Bes MA, Theelen B, Boekhout T, Egeler RM, Kuijper EJ. Significance of amplified fragment length polymorphism in identification and epidemiological examination of Candida species colonization in children undergoing allogeneic stem cell transplantation. J Clin Microbiol 2004, 42:1673-1679. 387556, 15071024, 10.1128/JCM.42.4.1673-1679.2004.
    • (2004) J Clin Microbiol , vol.42 , pp. 1673-1679
    • Ball, L.M.1    Bes, M.A.2    Theelen, B.3    Boekhout, T.4    Egeler, R.M.5    Kuijper, E.J.6
  • 10
    • 12444309299 scopus 로고    scopus 로고
    • Use of amplified fragment length polymorphism analysis to identify medically important Candida spp., including C. dubliniensis
    • 153876, 12682114, 10.1128/JCM.41.4.1357-1362.2003
    • Borst A, Theelen B, Reinders E, Boekhout T, Fluit AC, Savelkoul PH. Use of amplified fragment length polymorphism analysis to identify medically important Candida spp., including C. dubliniensis. J Clin Microbiol 2003, 41:1357-1362. 153876, 12682114, 10.1128/JCM.41.4.1357-1362.2003.
    • (2003) J Clin Microbiol , vol.41 , pp. 1357-1362
    • Borst, A.1    Theelen, B.2    Reinders, E.3    Boekhout, T.4    Fluit, A.C.5    Savelkoul, P.H.6
  • 11
    • 30444459956 scopus 로고    scopus 로고
    • Genotyping of Candida albicans on the basis of polymorphisms of ALT repeats in the repetitive sequence(RPS)
    • 10.1016/j.jdermsci.2005.08.010, 16364601
    • Iwata T, Hattori H, Chibana H, Mikami Y, Tomita Y, Kikuchi A, Kanbe T. Genotyping of Candida albicans on the basis of polymorphisms of ALT repeats in the repetitive sequence(RPS). J Dermatol Sci 2006, 41:43-54. 10.1016/j.jdermsci.2005.08.010, 16364601.
    • (2006) J Dermatol Sci , vol.41 , pp. 43-54
    • Iwata, T.1    Hattori, H.2    Chibana, H.3    Mikami, Y.4    Tomita, Y.5    Kikuchi, A.6    Kanbe, T.7
  • 12
    • 0037613725 scopus 로고    scopus 로고
    • Genotyping of Candida albicans oral strains from healthy individuals by polymorphic microsatellite locus analysis
    • 154696, 12734280, 10.1128/JCM.41.5.2203-2205.2003
    • Dalle F, Dumont L, Franco N, Mesmacque D, Caillot D, Bonnin P, Moiroux C, Vagner O, Cuisenier B, Lizard S, Bonnin A. Genotyping of Candida albicans oral strains from healthy individuals by polymorphic microsatellite locus analysis. J Clin Microbiol 2003, 41:2203-2205. 154696, 12734280, 10.1128/JCM.41.5.2203-2205.2003.
    • (2003) J Clin Microbiol , vol.41 , pp. 2203-2205
    • Dalle, F.1    Dumont, L.2    Franco, N.3    Mesmacque, D.4    Caillot, D.5    Bonnin, P.6    Moiroux, C.7    Vagner, O.8    Cuisenier, B.9    Lizard, S.10    Bonnin, A.11
  • 13
    • 0030876764 scopus 로고    scopus 로고
    • Parity among the randomly amplified polymorphic DNA method, multilocus enzyme electrophoresis, and Southern blot hybridization with the moderately repetitive DNA probe Ca3 for fingerprinting Candida albicans
    • 229967, 9276415
    • Pujol C, Joly S, Lockhart SR, Noel S, Tibayrenc M, Soll D. Parity among the randomly amplified polymorphic DNA method, multilocus enzyme electrophoresis, and Southern blot hybridization with the moderately repetitive DNA probe Ca3 for fingerprinting Candida albicans. J Clin Microbiol 1997, 35:2348-2358. 229967, 9276415.
    • (1997) J Clin Microbiol , vol.35 , pp. 2348-2358
    • Pujol, C.1    Joly, S.2    Lockhart, S.R.3    Noel, S.4    Tibayrenc, M.5    Soll, D.6
  • 14
    • 2942620543 scopus 로고    scopus 로고
    • Multilocus sequence typing is a reliable alternative method to DNA fingerprinting for discriminating among strains of Candida albicans
    • 427821, 15184424, 10.1128/JCM.42.6.2480-2488.2004
    • Robles JC, Koreen L, Park S, Perlin DS. Multilocus sequence typing is a reliable alternative method to DNA fingerprinting for discriminating among strains of Candida albicans. J Clin Microbiol 2004, 42:2480-2488. 427821, 15184424, 10.1128/JCM.42.6.2480-2488.2004.
    • (2004) J Clin Microbiol , vol.42 , pp. 2480-2488
    • Robles, J.C.1    Koreen, L.2    Park, S.3    Perlin, D.S.4
  • 15
    • 0033042463 scopus 로고    scopus 로고
    • Evaluation of DNA-base typing procedures for strain categorization of Candida albicans spp
    • 10.1016/S0732-8893(98)00143-6, 10212749
    • Espinel-Ingroff A, Vazquez JA, Boikov D, Pfaller MA. Evaluation of DNA-base typing procedures for strain categorization of Candida albicans spp. Diagn Microbiol Infect Dis 1999, 33:231-239. 10.1016/S0732-8893(98)00143-6, 10212749.
    • (1999) Diagn Microbiol Infect Dis , vol.33 , pp. 231-239
    • Espinel-Ingroff, A.1    Vazquez, J.A.2    Boikov, D.3    Pfaller, M.A.4
  • 16
    • 0025114197 scopus 로고
    • Candida albicans strain delineation
    • 358166, 1977511
    • Merz WG. Candida albicans strain delineation. Clin Microbiol Rev 1990, 3:321-334. 358166, 1977511.
    • (1990) Clin Microbiol Rev , vol.3 , pp. 321-334
    • Merz, W.G.1
  • 17
    • 1542395053 scopus 로고    scopus 로고
    • Ligation mediated PCR performed at low denaturation temperatures-PCR melting profiles
    • 203340, 12954790, 10.1093/nar/gng116
    • Masny A, Plucienniczak A. Ligation mediated PCR performed at low denaturation temperatures-PCR melting profiles. Nucl Acids Res 2003, 31:e114. 203340, 12954790, 10.1093/nar/gng116.
    • (2003) Nucl Acids Res , vol.31
    • Masny, A.1    Plucienniczak, A.2
  • 18
    • 33746211227 scopus 로고    scopus 로고
    • Evaluation of a PCR melting profile (PCR MP) technique for bacterial strain differentiation
    • 1489531, 16825344, 10.1128/JCM.00052-06
    • Krawczyk B, Samet A, Leibner J, Śledzińska A, Kur J. Evaluation of a PCR melting profile (PCR MP) technique for bacterial strain differentiation. J Clin Microbiol 2006, 44:2327-2332. 1489531, 16825344, 10.1128/JCM.00052-06.
    • (2006) J Clin Microbiol , vol.44 , pp. 2327-2332
    • Krawczyk, B.1    Samet, A.2    Leibner, J.3    Śledzińska, A.4    Kur, J.5
  • 19
    • 0026658192 scopus 로고
    • Epidemiologic typing and delineation of genetic relatedness of methicilin-resistant Staphylococcus aureus by macrorestriction analysis of genomic DNA by using pulsed-field gel electrophoresis
    • 270485, 1328279
    • Deplano A, Godard C, Maes N, Serruys E. Epidemiologic typing and delineation of genetic relatedness of methicilin-resistant Staphylococcus aureus by macrorestriction analysis of genomic DNA by using pulsed-field gel electrophoresis. J Clin Microbiol 1992, 30:2599-2605. 270485, 1328279.
    • (1992) J Clin Microbiol , vol.30 , pp. 2599-2605
    • Deplano, A.1    Godard, C.2    Maes, N.3    Serruys, E.4
  • 20
    • 70749105949 scopus 로고
    • DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting
    • Akopyanz N, Bukanow NO, Westblom TU, Kresovich S, Berg DE. DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting. Nucl Acids Res 1992, 11:6221-6225.
    • (1992) Nucl Acids Res , vol.11 , pp. 6221-6225
    • Akopyanz, N.1    Bukanow, N.O.2    Westblom, T.U.3    Kresovich, S.4    Berg, D.E.5
  • 21
    • 33646709429 scopus 로고    scopus 로고
    • Differentiation of Candida species obtained from nosocomial candidemia using RAPD-PCR technique
    • 10.1590/S0037-86822006000200008, 16699645
    • Valério HM, Weikert-Oliveira R, Resende MA. Differentiation of Candida species obtained from nosocomial candidemia using RAPD-PCR technique. Rev Soc Bras Med Trop 2006, 39:174-178. 10.1590/S0037-86822006000200008, 16699645.
    • (2006) Rev Soc Bras Med Trop , vol.39 , pp. 174-178
    • Valério, H.M.1    Weikert-Oliveira, R.2    Resende, M.A.3
  • 22
    • 33645462305 scopus 로고    scopus 로고
    • Strain differentiation of Trichophyton rubrum by randomly amplified polymorphic DNA and analysis of rDNA nontranscribed spacer
    • 10.1099/jmm.0.46236-0, 16533991
    • Baeza LC, Matsumoto MT, Almeida AM, Mendes-Giannini MJ. Strain differentiation of Trichophyton rubrum by randomly amplified polymorphic DNA and analysis of rDNA nontranscribed spacer. J Med Microbiol 2006, 55:429-436. 10.1099/jmm.0.46236-0, 16533991.
    • (2006) J Med Microbiol , vol.55 , pp. 429-436
    • Baeza, L.C.1    Matsumoto, M.T.2    Almeida, A.M.3    Mendes-Giannini, M.J.4
  • 23
    • 0032728091 scopus 로고    scopus 로고
    • Performance criteria of DNA fingerprinting methods for typing of Helicobacter pylori isolates: Experimental results and meta-analysis
    • 85883, 10565934
    • Burucoa C, Lhomme V, Fauchere JL. Performance criteria of DNA fingerprinting methods for typing of Helicobacter pylori isolates: Experimental results and meta-analysis. J Clin Microbiol 1999, 37:4071-4080. 85883, 10565934.
    • (1999) J Clin Microbiol , vol.37 , pp. 4071-4080
    • Burucoa, C.1    Lhomme, V.2    Fauchere, J.L.3
  • 24
    • 33646709252 scopus 로고    scopus 로고
    • The application of molecular techniques to the study of hospital infection
    • Andrei A, Zervos MJ. The application of molecular techniques to the study of hospital infection. Arch Pathol Lab Med 2006, 130:662-668.
    • (2006) Arch Pathol Lab Med , vol.130 , pp. 662-668
    • Andrei, A.1    Zervos, M.J.2
  • 25
    • 7044274647 scopus 로고    scopus 로고
    • Evaluation of randomly amplified polymorphic DNA and pulsed field gel electrophoresis techniques for molecular typing of Dermatophilus congolensis
    • 10.1016/j.femsle.2004.09.016, 15500984
    • Larrasa J, Garcia-Sanchez A, Ambrose NC, Parra A, Alonso JM, Rey JM, Hermoso-de-Mendoza M, Hermoso-de-Mendoza J. Evaluation of randomly amplified polymorphic DNA and pulsed field gel electrophoresis techniques for molecular typing of Dermatophilus congolensis. FEMS Microbiol Lett 2004, 240:87-97. 10.1016/j.femsle.2004.09.016, 15500984.
    • (2004) FEMS Microbiol Lett , vol.240 , pp. 87-97
    • Larrasa, J.1    Garcia-Sanchez, A.2    Ambrose, N.C.3    Parra, A.4    Alonso, J.M.5    Rey, J.M.6    Hermoso-de-Mendoza, M.7    Hermoso-de-Mendoza, J.8
  • 26
    • 0034935206 scopus 로고    scopus 로고
    • Molecular typing of Candida isolates from patients hospitalized in an Intensive Care Unit
    • Vroni G, Matsioda-Bernard P. Molecular typing of Candida isolates from patients hospitalized in an Intensive Care Unit. J Inf 2001, 42:50-56.
    • (2001) J Inf , vol.42 , pp. 50-56
    • Vroni, G.1    Matsioda-Bernard, P.2
  • 28
    • 0031020989 scopus 로고    scopus 로고
    • Factors affecting reliability and reproducibility of amplification-based DNA fingerprinting of representative bacterial pathogens
    • 229576, 9003592
    • Tyler KD, Wang G, Tyler SD, Johnson WM. Factors affecting reliability and reproducibility of amplification-based DNA fingerprinting of representative bacterial pathogens. J Clin Microbiol 1997, 35:339-346. 229576, 9003592.
    • (1997) J Clin Microbiol , vol.35 , pp. 339-346
    • Tyler, K.D.1    Wang, G.2    Tyler, S.D.3    Johnson, W.M.4
  • 29
    • 0030938113 scopus 로고    scopus 로고
    • Comparison of four molecular typing methods for evaluating genetic diversity among Candida albicans isolates from human immunodeficiency virus-positive patients with oral candidiasis
    • 229690, 9157142
    • Diaz-Guerra TM, Martinez-Suarez JV, Laguna F, Rodriguez-Tudela JL. Comparison of four molecular typing methods for evaluating genetic diversity among Candida albicans isolates from human immunodeficiency virus-positive patients with oral candidiasis. J Clin Microbiol 1997, 35:856-681. 229690, 9157142.
    • (1997) J Clin Microbiol , vol.35 , pp. 856-1681
    • Diaz-Guerra, T.M.1    Martinez-Suarez, J.V.2    Laguna, F.3    Rodriguez-Tudela, J.L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.