DNA barcoding in photosymbiotic species of diplosoma (Ascidiacea: Didemnidae), with the description of a new species from the Southern Ryukyus, Japan

Zoological Science

Volumn 26, Issue 8, 2009, Pages 564-568

  Hirose, Mamiko ^a   Hirose, Euichi ^a  

^a UNIVERSITY OF THE RYUKYUS   (Japan)

Author keywords

COI; Colony form; Coral reefs; Didemnid ascidian; DNA barcoding; New species; Retractor muscleretractor muscle

Indexed keywords

DNA;

ANIMAL; ARTICLE; CHROMOSOME PAINTING; CLASSIFICATION; GENETICS; JAPAN; PHYLOGENY; UROCHORDATA;

ANIMALS; CHROMOSOME PAINTING; DNA; JAPAN; PHYLOGENY; UROCHORDATA;

ANTHOZOA; ASCIDIA; ASCIDIACEA; CYANOBACTERIA; DIDEMNIDAE; DIPLOSOMA (TUNICATE); DIPLOSOMA VIRENS;

EID: 70450255261     PISSN: 02890003     EISSN: 02890003     Source Type: Journal    
DOI: 10.2108/zsj.26.564     Document Type: Article

References (22)

1. Donia MS, Hathaway BJ, Sudek S, Haygood MG, Rosovitz MJ, Ravel J, Schmidt EW (2006) Natural combinatorial peptide libraries in cyanobacterial symbionts of marine ascidians. Nat Chem Biol 2: 729-735
2. Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3: 294-299
3. Hirose E (2000) Plant rake and algal pouch of the larvae in the tropical ascidian Diplosoma similis: An adaptation for vertical transmission of photosynthetic symbionts Prochloron. Zool Sci 17: 233-240
4. Hirose E, Oka AT (2008) A new species of photosymbiotic ascidian from the Ryukyu Archipelago, Japan, with remarks on the stability of stigma number in photosymbiotic Diplosoma species. Zool Sci 25: 1261-1267
5. Hirose E, Oka AT, Akahori M (2005) Sexual reproduction of the photosymbiotic ascidian Diplosoma virens in the Ryukyu Archipelago, Japan: Vertical transmission, seasonal change, and possible impact of parasitic copepods. Mar Biol 146: 677-682
6. Hirose E, Adachi R, Kuze K (2006) Sexual reproduction of the Prochloron-bearing ascidians, Trididemnum cyclops and Lissoclinum bistratum, in subtropical waters: Seasonality and vertical transmission of photosymbionts. J Mar Biol Assoc UK 86: 175-179
7. Hirose E, Kojima A, Nogami J, Teruya K (2007) Seasonality of sexual reproduction in three photosymbiotic Trididemnum species (Didemnidae, Ascidiacea, Tunicata) in a subtropical seagrass bed. J Mar Biol Assoc UK 87: 979-982
8. Hirose E, Oka AT, Hirose M (2009) Two new species of photosymbiotic ascidians of the genus Diplosoma from the Ryukyu Archipelago, with partial sequences of the COI gene. Zool Sci 26: 362-368
9. Hirose M, Yokobori S, Hirose E (2009) Potential speciation of morphotypes in the photosymbiotic ascidian Didemnum molle in the Ryukyu Archipelago, Japan. Coral Reefs 28: 119-126
10. Jobb G (2008) TREEFINDER version of October 2008. Munich, Germany. (Distributed by the author at www.treefinder.de)
11. Kott P (1982) Didemnid-algal symbiosis: host species in the Western Pacific with notes on the symbiosis. Micronesica 18: 95-127
12. Kott P (2001) The Australian Ascidiacea part 4, Aplousobranchia (3), Didemnidae. Mem Queensland Mus 47: 1-408
13. Monniot C, Monniot F (1987) Les ascidies de Polynésie française. Mém Mus Natl Hist Nat A 136: 1-155
14. Nishikawa T (1995) Phylum Chordata. Hoiku-sha, Osaka Oka AT
15. Hirose E (2008) Photosymbiotic ascidians from Nakanoshima Island and Takarajima Island (the Tokara Islands, Ryukyu Archipelago, Japan) with remarks on the status of Diplosoma midori (Tokioka 1954). Publ Seto Mar Biol Lab 40: 85-92
16. Oka AT, Suetsugu M, Hirose E (2005) Two new species of Diplosoma Ascidiacea: Didemnidae) bearing prokaryotic algae Prochloron from Okinawajima (Ryukyu Archipelago, Japan). Zool Sci 22: 367-374
17. Posada D, Crandall KA (1998) Modeltest: Testing the model of DNA substitution. Bioinformatics 14: 817-818
18. Ratnasingham S, Hebert PD (2007) BOLD: The Barcode of Life data system (http://www.barcodinglife.org). Mol Ecol Notes 7: 355-364
19. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
20. Swofford D (2003) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4.0b7a. Sinauer Associates, Sunderland
21. Thompson JD, Higgins DG, Gibson TJ (1994) ClustalW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penaltiesand weight matrix choice. Nucleic Acids Res 22: 4673-4680
22. Yokobori S, Kurabayashi A, Neilan BA, Maruyama T, Hirose E (2006) Multiple origins of the ascidian-Prochloron symbiosis: molecular phylogeny of photosymbiotic and nonsymbiotic colonial ascidians inferred from 18S rDNA sequences. Mol Phylogenet Evol 40: 8-19