Geoglobus acetivorans sp. nov., an iron(III)-reducing archaeon from a deep-sea hydrothermal vent

International Journal of Systematic and Evolutionary Microbiology

Volumn 59, Issue 11, 2009, Pages 2880-2883

  Slobodkina, G B ^a   Kolganova, T V ^b   Querellou, J ^c   Bonch Osmolovskaya, E A ^a   Slobodkin, A I ^a  

^a WINOGRADSKY INSTITUTE OF MICROBIOLOGY   (Russian Federation)

^b INSTITUTE OF BIOENGINEERING   (Russian Federation)

^c IFREMER   (France)

Author keywords

[No Author keywords available]

Indexed keywords

FERRIC ION; FERRIC OXIDE; RNA 16S;

ARTICLE; BACTERIAL STRAIN; CARBON SOURCE; ELECTRON; GENE SEQUENCE; GEOGLOBUS ACETIVORANS; GEOGLOBUS AHANGARI; HYDROTHERMAL VENT; HYPERTHERMOPHILIC ARCHAEON; HYPERTHERMOPHILIC BACTERIUM; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; TEMPERATURE MEASUREMENT;

ARCHAEA; DNA, ARCHAEAL; DNA, RIBOSOMAL; HOT TEMPERATURE; IRON; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEAWATER;

ARCHAEA; GEOGLOBUS; GEOGLOBUS AHANGARI;

EID: 70450228401     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.011080-0     Document Type: Article

References (18)

1. Casamayor, E. O., Massana, R., Benlloch, S., Øvreas, L., Diez, B., Goddard, V. J., Gasol, J. M., Joint, I., Rodriguez-Valera, F. & Pedrós-Alio, C. (2002). Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern. Environ Microbiol 4, 338-438.
2. Cole, J. R., Chai, B., Farris, R. J., Wang, Q., Kulam-Syed-Mohideen, A. S., McGarrell, D. M., Bandela, A. M., Cardenas, E., Garrity, G. M. & Tiedje, J. M. (2007). The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data. Nucleic Acids Res 35, D169-D172.
3. Hungate, R. E. (1969). A roll tube method for cultivation of strict anaerobes. Methods Microbiol 3B, 117-132.
4. Judicial Commission of the International Committee for Systematics of Prokaryotes (2008). Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. Int J Syst Evol Microbiol 58, 1755-1763.
5. Kashefi, K., Tor, J. M., Holmes, D. E., Gaw Van Praagh, C. V., Reysenbach, A. L. & Lovley, D. R. (2002). Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron accepter. Int J Syst Evol Microbiol 52, 719-728.
6. Kashefi, K., Holmes, D. E., Barros, J. A. & Lovley, D. R. (2003). Thermophily in the Geobacteraceae: Geothermobacter erlichii gen. nov., sp. nov., a novel member of the Geobacteraceae from the "Bag City" hydrothermal vent. Appl Environ Microbiol 69, 2985-2993.
7. Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. New York: Wiley.
8. Lovley, D. R. & Phillips, E. J. P. (1988). Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reduction of iron or manganese. Appl Environ Microbiol 54, 1472-1480.
9. Miroshnichenko, M. L., Slobodkin, A. I., Kostrikina, N. A., L'Haridon, S., Nercessian, O., Spring, S., Stackebrandt, E., Bonch-Osmolovskaya, E. A. & Jeanthon, C. (2003). Deferribacter abyssi sp. nov., an anaerobic thermophile from deep-sea hydrothermal vents of the Mid-Atlantic Ridge. Int J Syst Evol Microbiol 53, 1637-1641.
10. Muyzer, G., De Waal, E. C. & Uitterlinden, A. G. (1993). Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59, 695-700.
11. Muyzer, G., Brinkhoff, T., Nubel, U., Santegoeds, C., Schafer, H. & Wawer, C. (1997). Denaturing gradient gel electrophoresis (DGGE) in microbial ecology. In Molecular Microbial Ecology Manual, chapter 3.4.4, pp. 1-27. Edited by A. D. L. Akkermans, J. D. van Elsas & F. J. de Bruijn. Dordrecht: Kluwer Academic.
12. Reysenbach, A. L., Liu, Y., Banta, A. B., Beveridge, T. J., Kirshtein, J. D., Schouten, S., Tivey, M. K., Von Damm, K. & Voytek, M. A. (2006). A ubiquitous thermoacidophilic archaeon from deep-sea hydrothermal vents. Nature 442, 444-447.
13. Slobodkin, A. I., Tourova, T. P., Kuznetsov, B. B., Kostrikina, N. A., Chernyh, N. A. & Bonch-Osmolovskaya, E. A. (1999a). Thermoanaerobacter siderophilus sp. nov., a novel dissimilatory Fe(III)-reducing anaerobic thermophilic bacterium. Int J Syst Bacteriol 49, 1471-1478.
14. Slobodkin, A. I., Zavarzina, D. G., Sokolova, T. G. & Bonch-Osmolovskaya, E. A. (1999b). Dissimilatory reduction of inorganic electron acceptors by thermophilic anaerobic prokaryotes. Microbiology (English translation of Mikrobiologiia) 68, 522-542.
15. Slobodkin, A., Campbell, B., Cary, S. C., Bonch-Osmolovskaya, E. A. & Jeanthon, C. (2001). Evidence for the presence of thermophilic Fe(III)-reducing microorganisms in deep-sea hydrothermal vents at 13°N (East Pacific Rise). FEMS Microbiol Ecol 36, 235-243.
16. Tor, J. M., Kashefi, K. & Lovley, D. R. (2001). Acetate oxidation coupled to Fe(III) reduction in hyperthermophilic microorganisms. Appl Environ Microbiol 67, 1363-1365.
17. Woese, C. R., Achenbach, L., Rouvière, P. & Mandelco, L. (1991). Archaeal phylogeny: reexamination of the phylogenetic position of Archaeoglobus fulgidus in light of certain composition-induced artifacts. Syst Appl Microbiol 14, 364-371.
18. Zavarzina, D. G., Tourova, T. P., Kuznetsov, B. B., Bonch-Osmolovskaya, E. A. & Slobodkin, A. I. (2002). Thermovenabulum ferriorganovorum gen. nov., sp. nov., a novel thermophilic anaerobic endospore-forming bacterium. Int J Syst Evol Microbiol 52, 1737-1743.