FPGA-based computation for maximum likelihood phylogenetic tree evaluation

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 3203, Issue , 2004, Pages 1076-1079

  Mak, Terrence S T ^a   Lam, K P ^a  

^a CHINESE UNIVERSITY OF HONG KONG   (Hong Kong)

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; BIOLOGY; COMPUTATION THEORY; DNA SEQUENCES; HEURISTIC ALGORITHMS; MAXIMUM LIKELIHOOD;

COMPUTATIONAL ISSUES; EVALUATION FUNCTION; EVOLUTIONARY HISTORY; FPGA-BASED COMPUTATIONS; MAXIMUM LIKELIHOOD CRITERION; PARTIAL LIKELIHOODS; PHYLOGENETIC TREES; TREE RECONSTRUCTION;

FIELD PROGRAMMABLE GATE ARRAYS (FPGA);

EID: 70449949032     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-30117-2_130     Document Type: Conference Paper

References (4)

1. Kishino H., et al., "Maximum Likelihood Inference of Protein Phylogeny and the Origin of Chloroplasts", J. Mol. Evol., 31:151-160, 1990
2. Felsenstein J., "Evolutionary trees from DNA sequences: a maximum likelihood approach", J. Mol. Evol., 17:368-376, 1981
3. T.H. Jukes and C.R. cantor, "Evolution of protein molecules", in H.N. Munro (ed.), Mammalian Protein Metabolism, pp. 21-123, Academic Press, New York, 1969
4. J. Adachi et al., "MOLPHY version 2.3, program for molecular phylogenetics based on Maximum Likelihood", Technical report, The Institute of Statistical Mathematics, Tokyo, Japan, 1996