Rapid and efficient proteolysis for proteomic analysis by protease-immobilized microreactor

Electrophoresis

Volumn 30, Issue 18, 2009, Pages 3257-3264

  Yamaguchi, Hiroshi ^a   Miyazaki, Masaya ^a,b   Honda, Takeshi ^a,e   Briones Nagata, Maria Portia ^a   Arima, Kazunari ^c   Maeda, Hideaki ^a,b,d  

^a NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^b KYUSHU UNIVERSITY   (Japan)

^c KAGOSHIMA UNIVERSITY   (Japan)

^d JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^e YAMAGUCHI UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

Author keywords

Enzyme immobilization; Microfluidics; Protease; Proteolysis; Stability

Indexed keywords

CHEMICAL REACTORS; CLINICAL RESEARCH; EFFICIENCY; ENZYME IMMOBILIZATION; MOLECULAR BIOLOGY; PROTEOLYSIS;

CONVENTIONAL METHODS; CYTOCHROME C; IMMOBILIZATION TECHNIQUE; IN-SOLUTION DIGESTIONS; LIMITED SENSITIVITY; MICRO-REACTOR; MICROFLUIDIC-BASED; PROTEASE; PROTEIN IDENTIFICATION; PROTEOMIC ANALYSIS;

MICROFLUIDICS;

CHYMOTRYPSIN A; CYTOCHROME C; PROTEINASE; TRYPSIN;

ALKYLATION; ARTICLE; CLINICAL RESEARCH; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME IMMOBILIZATION; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; IMMOBILIZED CELL REACTOR; INTERMETHOD COMPARISON; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; PROCESS DEVELOPMENT; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN DENATURATION; PROTEIN HYDROLYSIS; PROTEIN IMMOBILIZATION; PROTEIN STABILITY; PROTEOMICS; SEQUENCE ANALYSIS; THERMOSTABILITY;

EID: 70449876733     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.200900134     Document Type: Article

References (29)

1. Aebersold, R., Mann, M., Nature 2003, 422, 198-207.
2. Miyazaki, M., Maeda, H., Trends Biotechnol. 2006, 24, 463-470.
3. Miyazaki, M., Honda, T., Yamaguchi, H., Briones, M. P. P., Maeda, H., in: Harding, S. E. (Eds.), Biotechnology & Genetic Engineering Reviews, Nottingham University Press, Nottingham 2008, 25, 405-428.
4. Liu, Y., Liu, B., Yang, P., Girault, H. H., Anal. Bioanal. Chem. 2008, 390, 227-229.
5. Ma, J., Zhang, L., Liang, Z., Zhang, W., Zhang, Y., Anal. Chim. Acta 2009, 632, 1-8.
6. Ma, J., Ziang, Z., Qiao, X., Deng, Q., Tao, D., Zhang, L., Zhang, Y., Anal. Chem. 2008, 80, 2949-2956.
7. Calleri, E., Temporini, C., Perani, E., Palma, A. D., Lubda, D., Mellerio, G., Sala, A. et al., J. Proteomie Res. 2005, 4, 481-490.
8. Lee, J., Musyimi, H. K., Soper, S. A., Murray, K. K., J. Am. Soc. Mass Spectrom. 2008, 19, 964-972.
9. Fan, H., Chen, G., Proteomics 2007, 7, 3445-3449.
10. Li, Y., Xu, X., Deng, C., Yang, P., Zhang, X., J. Proteome Res. 2007, 6, 3849-3855.
11. Nel, A. L., Krenkova, J., Kleparnik, K., Smadja, C., Taverna, M., Viovy, J. L., Foret, F., Electrophoresis 2008, 29, 4944-4947.
12. Thomsen, M. S., Pölt, P., Nidetzky, B., Chem. Commun. 2007, 2527-2529.
13. Miyazaki, M., Kaneno, J., Uehara, M., Fujii, H., Shimizu, M., Maeda, H., Chem. Commun. 2003, 648-649.
14. Kaneno, J., Kohara, R., Miyazaki, M., Uehara, M., Kanno, K., Fujii, H., Shimizu, M. et al., New J. Chem. 2003, 27, 1765-1768.
15. Miyazaki, M., Kaneno, J., Kohara, R., Kanno, K., Fujii, H., Shimizu, M., Maeda, H., Chem. Eng. J. 2004, 101, 277-284.
16. Miyazaki, M., Kaneno, J., Yamaori, S., Honda, T., Briones, M. P. P., Uehara, M., Arima, K. et al., Prot. Pept. Lett. 2005, 12, 207-210.
17. Honda, T., Miyazaki, M., Nakamura, H., Maeda, H., Chem. Commun. 2005, 5062-5064.
18. Honda, T., Miyazaki, M., Nakamura, H., Maeda, H., Adv. Synth. Catal. 2006, 348, 2163-2171.
19. Honda, T., Miyazaki, M., Yamaguchi, Y., Nakamura, H., Maeda, H., Lab Chip 2007, 7, 366-372.
20. Lottenberg, R ., Christensen, U., Jackson, C. M., Coleman, P. L., in: Lorand, L. (Eds.), Methods in Enzymology, Academic Press, New York 1981, 341-361.
21. Yamashita, K., Miyazaki, M., Nakamura, H., Maeda, H., J. Phys. Chem. A 2009, 113, 165-169.
22. Wu, H., Tian, Y., Liu, B., Lu, H., Wang, X., Zhai, J., Jin, H. et al., J. Proteome Res. 2004, 3, 1201-1209.
23. Dulay, M. T., Baca, Q. J., Zare, R. N., Anal. Chem. 2005, 77, 4604-4610.
24. Shui, W., Fan, J., Yang, P., Liu, C., Zhai, J., Lei, J., Yan, Y. et al., Anal. Chem. 2006, 78, 4811-4819.
25. Jin, L. J., Ferrance, J., Sanders, J. C., Landers, J. P., Hurst, G. B., Lab Chip 2003, 3, 11-18.
26. Bigwarfe, P. M. J., Wood, T. D., Int. J. Mass Spectrum. 2004, 234, 185-202.
27. Ethier, M., Hou, W., Duewel, H. S., Figeys, D., J. Proteome Res. 2006, 5, 2754-2759.
28. Lin, S., Yao, G., Qi, D., Li, Y., Deng, C., Yang, P., Zhang, X., Anal. Chem. 2008, 80, 3655-3665.
29. Koster, S., Verpoorte, E., Lab Chip 2007, 7, 1394-1412.