Spectroelectrochemical study of the [NiFe] hydrogenase from Desulfovibrio vulgaris miyazaki F in solution and immobilized on biocompatible gold surfaces

Journal of Physical Chemistry B

Volumn 113, Issue 46, 2009, Pages 15344-15351

  Millo, Diego ^a   Pandelia, Maria Eirini ^b   Utesch, Tillmann ^a   Wisitruangsakul, Nattawadee ^a   Mroginski, Maria A ^a   Lubitz, Wolfgang ^b   Hildebrandt, Peter ^a   Zebger, Ingo ^a  

^a TECHNISCHE UNIVERSITÄT BERLIN   (Germany)

^b MAX PLANCK INSTITUTE FOR CHEMICAL ENERGY CONVERSION   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION SPECTROSCOPY; AMINES; ARGON; CATALYST ACTIVITY; CYCLIC VOLTAMMETRY; DESORPTION; ENZYMES; MODEL STRUCTURES; MONOLAYERS; OXYGEN; REACTION KINETICS; SPECTROELECTROCHEMISTRY;

ACID-BASE EQUILIBRIA; ACTIVE SITE; AMINO-TERMINATED; APPLIED POTENTIALS; AU ELECTRODES; C-O STRETCHING; CATALYTIC ACTIVITY; CATALYTIC CURRENT; CATALYTIC CYCLES; DESULFOVIBRIO; DESULFOVIBRIO VULGARIS; ELECTROCHEMICAL METHODS; ELECTROSTATIC BINDING; GIGAS; GOLD SURFACES; HEAD GROUPS; HYDROGENASES; IMMOBILIZED ENZYME; IR ABSORPTION; IR SPECTROELECTROCHEMISTRY; MIDPOINT POTENTIALS; MOMENT CALCULATION; NORMAL HYDROGEN ELECTRODES; PH VALUE; POSITIVELY CHARGED; PROTEIN-DESORPTION; REACTIVE SPECIES; SLOW DEGRADATION; SPECTROELECTROCHEMICAL STUDY; SPECTROSCOPIC CHARACTERIZATION; STRUCTURAL MODELS; TIME-SCALES; [NIFE]-HYDROGENASE;

ELECTROCHEMICAL ELECTRODES;

EID: 70449561029     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp906575r     Document Type: Article

References (68)

1. Adams, M. W. W.; Mortenson, L. E.; Chen, J. S. Biochim. Biophys. Acta 1980, 594, 105.
2. De Lacey, A. L.; Fernandez, V. M.; Rousset, M.; Cammack, R. Chem. Rev. 2007, 101, 4304.
3. Lubitz, W.; van Gastei, M. Nickel Iron Hydrogenases. In Metal Ions in Life Science; Sigel, A., Sigel, H., Sigle, R. O., Eds.; Wiley: New York, 2007; Vol.2, pp 279-322.
4. Ogata, H.; Lubitz, W.; Higuchi, Y. Dalton Trans. 2009, 37, 7577.
5. Higuchi, Y.; Yagi, T.; Yasuoka, N. Structure 1997, 5, 1671.
6. Ogata, H.; Hirota, S.; Nakahara, A.; Komori, H.; Shibata, N.; Kato, T.; Kano, K.; Higuchi, Y. Structure 2005, 13, 1635.
7. Ogata, H.; Mizoguchi, Y.; Mizuno, N.; Miki, K.; Adachi, S.; Yasuoka, N.; Yagi, T.; Yamauchi, O.; Hirota, S.; Higuchi, Y. J. Am. Chem. Soc. 2002, 124, 11628.
8. Happe, R. P.; Roseboom, W.; Pierik, A. J.; Albracht, S. P. J.; Bagley, K. A. Nature 1997, 385, 126.
9. Fichtner, C.; Launch, C.; Bothe, E.; Lubitz, W. Biochemistry 2006, 45, 9706.
10. Vincent, K. A.; Parkin, A.; Armstrong, F. A. Chem. Rev. 2007, 101, 4366.
11. Armstrong, F. A.; Albracht, P. J. Philos. Trans. R. Soc., A 2005, 363, 937.
12. Cammack, R.; Fernandez, V. M.; Hatchikian, E. C. Methods Enzymol. 1994, 243, 43.
13. Dementin, S.; Belle, V.; Champ, S.; Bertrand, P.; Guigliarelli, B.; De Lacey, A. L.; Fernandez, V. M.; Leger, C.; Rousset, M. Int. J. Hydrogen Energy 2008, 33, 1503.
14. van Gastei, M.; Stein, M.; Brecht, M.; Schroder, O.; Lendzian, F.; Bittl, R.; Ogata, H.; Higuchi, Y.; Lubitz, W. J. Biol. Inorg. Chem. 2006, 11, 41.
15. Volbeda, A.; Martin, L.; Cavazza, C.; Matho, M.; Faber, B. W.; Roseboom, W.; Albracht, S. P. J.; Garcin, E.; Rousset, M.; Fontecilla-Camps, J. C. J. Biol. Inorg. Chem. 2005, 10, 239.
16. Lubitz, W.; Reijerse, E.; van Gastei, M. Chem. Rev. 2007, 101, 4331.
17. Cammack, R.; Patil, D.; Aguirre, R.; Hatchikian, E. C. FEBS Lett. 1982, 142, 289.
18. Coremans, J. M. C. C.; Vanderzwaan, J. W.; Albracht, S. P. J. Biochim. Biophys. Acta 1992, 1119, 157.
19. Teixeira, M.; Moura, I.; Xavier, A. V.; Moura, J. J. G.; Legall, J.; Dervartanian, D. V.; Peck, H. D.; Huynh, B. H. 7. Biol. Chem. 1989, 264, 16435.
20. Roberts, L. M.; Lindahl, P. A. J. Am. Chem. Soc. 1995, 111, 2565.
21. Roberts, L. M.; Lindahl, P. A. Biochemistry 1994, 33, 14339.
22. Coremans, J. M. C. C.; Vangarderen, C. J.; Albracht, S. P. J. Biochim. Biophys. Acta 1992, 1119, 148.
23. Hoeben, F. J. M.; Meijer, F. S.; Dekker, C.; Albracht, S. P. J.; Heering, H. A.; Lemay, S. G. ACS Nano 2008, 2, 2497.
24. Hoeben, F. J. M.; Heller, I.; Albracht, S. P. J.; Dekker, C.; Lemay, S. G.; Heering, H. A. Langmuir 2008, 24, 5925.
25. Pershad, H. R.; Duff, J. L. C.; Heering, H. A.; Duin, E. C.; Albracht, S. P. J.; Armstrong, F. A. Biochemistry 1999, 38, 8992.
26. Pershad, H. R.; Duff, J. L. C.; Heering, H. A.; Duin, E. C.; Albracht, S. P. J.; Armstrong, F. A. J. Biol. Inorg. Chem. 1999, 74, 264.
27. Leger, C.; Elliott, S. J.; Hoke, K. R.; Jeuken, L. J. C.; Jones, A. K.; Armstrong, F. A. Biochemistry 2003, 42, 8653.
28. van Gastei, M.; Fichtner, C.; Neese, F.; Lubitz, W. Biochem. Soc. Trans. 2005, 33, 1.
29. Foerster, S.; Stein, M.; Brecht, M.; Ogata, H.; Higuchi, Y.; Lubitz, W. J. Am. Chem. Soc. 2003, 125, 83.
30. Dole, F.; Fournel, A.; Magro, V.; Hatchikian, E. C.; Bertrand, P.; Guigliarelli, B. Biochemistry 1997, 36, 7847.
31. DeLacey, A. L.; Hatchikian, E. C.; Volbeda, A.; Frey, M.; FontecillaCamps, J. C.; Fernandez, V. M. J. Am. Chem. Soc. 1997, 119, 7181.
32. Burgdorf, T.; Loscher, S.; Liebisch, P.; Van der Linden, E.; Galander, M.; Lendzian, F.; Meyer-Klaucke, W.; Albracht, S. P. J.; Friedrich, B.; Dau, H.; Haumann, M. J. Am. Chem. Soc. 2005, 127, 576.
33. Knüttel, K.; Schneider, K.; Erkens, A.; Plass, W.; Müller, A.; Bill, E.; Trautwein, A. X. Bull. Pol. Acad. Sci. Chem. 1994, 42, 495.
34. Saggu, M.; Zebger, I.; Ludwig, M.; Lenz, O.; Friedrich, B.; Hildebrandt, P.; Lendzian, F. J. Biol. Chem. 2009, 284, 16264.
35. Bleijlevens, B.; van Broekhuizen, F. A.; De Lacey, A. L.; Roseboom, W.; Fernandez, V. M.; Albracht, S. P. J. J. Biol. Inorg. Chem. 2004, 9, 743.
36. De Lacey, A. L.; Stadler, C.; Cavazza, C.; Hatchikian, E. C.; Fernandez, V. M. J. Am. Chem. Soc. 2000, 122, 11232.
37. De Lacey, A. L.; Pardo, A.; Fernandez, V. M.; Dementin, S.; dryanczyk-Perrier, G.; Hatchikian, E. C.; Rousset, M. J. Biol. Inorg. Chem. 2004, 9, 636.
38. Armstrong, F. A.; Belsey, N. A.; Cracknell, J. A.; Goldet, G.; Parkin, A.; Reisner, E.; Vincent, K. A.; Wait, A. F. Chem. Soc. Rev. 2009, 38, 36.
39. Leger, C.; Bertrand, P. Chem. Rev. 2008, 108, 2379.
40. Rudiger, O.; Abad, J. M.; Hatchikian, E. C.; Fernandez, V. M.; De Lacey, A. L. J. Am. Chem. Soc. 2005, 127, 16008.
41. Vincent, K. A.; Cracknell, J. A.; Clark, J. R.; Ludwig, M.; Lenz, O.; Friedrich, B.; Armstrong, F. A. Chem. Commun. 2006, 5033.
42. Miyaké, H.; Ye, S.; Osawa, M. Electrochem. Commun. 2002, 4, 973.
43. Osawa, M. Bull. Chem. Soc. Jpn. 1997, 70, 2861.
44. Osawa, M. Surface-enhanced infrared absorption. In Near-Field Optics and Surface Plasmon Polaritons, Topics in Applied Physics 81; Kawata, S., Ed.; Springer: Berlin, 2001; pp 163-187.
45. Ataka, K.; Heberle, J. J. Am. Chem. Soc. 2004, 126, 9445.
46. Ataka, K.; Heberle, J. Anal. Bioanal. Chem. 2007, 388, 47.
47. Wisitruangsakul, N.; Lenz, O.; Ludwig, M.; Friedrich, B.; Lendzian, F.; Hildebrandt, P.; Zebger, I. Angew. Chem., Int. Ed. 2009, 48, 611.
48. Ataka, K.; Giess, F.; Knoll, W.; Naumann, R.; Haber-Pohlmeier, S.; Richter, B.; Heberle, J. J. Am. Chem. Soc. 2004, 126, 16199.
49. Wisitruangsakul, N.; Zebger, I.; Ly, K. H.; Murgida, D. H.; Ekgasit, S.; Hildebrandt, P. Phys. Chem. Chem. Phys. 2008, 10, 5276.
50. Love, J. C.; Estroff, L. A.; Kriebel, J. K.; Nuzzo, R. G.; Whitesides, G. M. Chem. Rev. 2005, 105, 1103.
51. Murgida, D. H.; Hildebrandt, P. Phys. Chem. Chem. Phys. 2005, 7, 3773.
52. Murgida, D. H.; Hildebrandt, P. Acc. Chem. Res. 2004, 37, 854.
53. Yagi, T.; Kimura, K.; Daidoji, H.; Sakai, F.; Tamura, S.; Inokuchi, H. J. Biochem. 1976, 79, 661.
54. Baymann, F.; Moss, D. A.; Mantele, W. Anal. Biochem. 1991, 199, 269.
55. Prince, R. C.; Linkletter, S. J. G.; Dutton, P. L. Biochim. Biophys. Acta 1981, 635, 132.
56. Murgida, D. H.; Hildebrandt, P. J. Mol. Struct. 2001, 565, 97.
57. Patel, N.; Davies, M. C.; Hartshorne, M.; Heaton, R. J.; Roberts, C. J.; Tendier, S. J. B.; Williams, P. M. Langmuir 1997, 13, 6485.
58. Brunger, A. T.; Karplus, M. Proteins: Struct. Funct. Genet. 1988, 4, 148.
59. Brooks, B. R.; Bruccoleri, R. E.; Olafson, B. D.; States, D. J.; Swaminathan, S.; Karplus, M. J. Comput. Chem. 1983, 4, 187.
60. Foloppe, N.; MacKerell, A. D. J. Comput. Chem. 2000, 27, 86.
61. Humphrey, W.; Dalke, A.; Schulten, K. J. Mol. Graphics Modell. 1996, 14, 33.
62. Teixeira, V. H.; Baptista, A. M.; Soares, C. M. Biophys. J. 2006, 97, 2035.
63. Fichtner, C. Spektroskopische und elektrochemische Untersuchung der [NiFe]-Hydrogenase aus Desulfovibrio vulgaris Miyazaki F. Ph.D. Thesis, Heinrich-Heine-Universität Düsseldorf, June 2005.
64. Asso, M.; Guigliarelli, B.; Yagi, T.; Bertrand, P. Biochim. Biophys. Acta 1992, 1122, 50.
65. Campina, J. M.; Martins, A.; Silva, F. J. Phys. Chem. C 2007, 111, 5351.
66. Degefa, T. H.; Schon, P.; Bongard, D.; Walder, L. J. Electroanal. Chem. 2004, 574, 49.
67. White, H. S.; Peterson, J. D.; Cui, Q. Z.; Stevenson, K. J. J. Phys. Chem. B 1998, 102, 2930.
68. Vincent, K. A.; Belsey, N. A.; Lubitz, W.; Armstrong, F. A. J. Am. Chem. Soc. 2006, 128, 7448.