-
1
-
-
34648825194
-
Ancestral animal genomes reconstruction
-
10.1016/j.coi.2007.06.009, 17702562
-
Lopez Rascol V, Pontarotti P, Levasseur A. Ancestral animal genomes reconstruction. Curr Opin Immunol 2007, 19:542-546. 10.1016/j.coi.2007.06.009, 17702562.
-
(2007)
Curr Opin Immunol
, vol.19
, pp. 542-546
-
-
Lopez Rascol, V.1
Pontarotti, P.2
Levasseur, A.3
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Bio 1990, 215:403-410.
-
(1990)
J Mol Bio
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
4944262040
-
Global alignment: Finding rearrangements during alignment
-
10.1093/bioinformatics/btg1005, 12855437
-
Brudno M, Malde S, Poliakov A, Do CB, Couronne O, Dubchak I, Batzoglou S. Global alignment: Finding rearrangements during alignment. Bioinformatics 2003, 19:i54-62. 10.1093/bioinformatics/btg1005, 12855437.
-
(2003)
Bioinformatics
, vol.19
-
-
Brudno, M.1
Malde, S.2
Poliakov, A.3
Do, C.B.4
Couronne, O.5
Dubchak, I.6
Batzoglou, S.7
-
4
-
-
3543051830
-
Mauve: Multiple alignment of conserved genomic sequence with rearrangements
-
10.1101/gr.2289704, 442156, 15231754
-
Darling ACE, Mau B, Blattner FR, Perna NT. Mauve: Multiple alignment of conserved genomic sequence with rearrangements. Genome Research 2004, 14:1394-1403. 10.1101/gr.2289704, 442156, 15231754.
-
(2004)
Genome Research
, vol.14
, pp. 1394-1403
-
-
Darling, A.C.E.1
Mau, B.2
Blattner, F.R.3
Perna, N.T.4
-
5
-
-
33746582319
-
A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database
-
10.1186/1471-2105-7-201, 1523372, 16608522
-
Dehal PS, Boore JL. A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database. BMC Bioinformatics 2006, 7:201. 10.1186/1471-2105-7-201, 1523372, 16608522.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 201
-
-
Dehal, P.S.1
Boore, J.L.2
-
6
-
-
58149185123
-
Ensembl 2009
-
10.1093/nar/gkn828, 2686571, 19033362
-
Hubbard TJP, Aken BL, Ayling S. Ensembl 2009. Nucleic Acids Res 2009, 37:D690-D697. 10.1093/nar/gkn828, 2686571, 19033362., http://www.ensembl.org
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Hubbard, T.J.P.1
Aken, B.L.2
Ayling, S.3
-
8
-
-
1842768393
-
Reconstructing the genomic architecture of ancestral mammals: lessons from human, mouse, and rat genomes
-
10.1101/gr.1975204, 383294, 15059991
-
Bourque G, Pevzner PA, Tesler G. Reconstructing the genomic architecture of ancestral mammals: lessons from human, mouse, and rat genomes. Genome Research 2004, 14:507-516. 10.1101/gr.1975204, 383294, 15059991.
-
(2004)
Genome Research
, vol.14
, pp. 507-516
-
-
Bourque, G.1
Pevzner, P.A.2
Tesler, G.3
-
9
-
-
25444473119
-
FIGENIX: Intelligent automation of genomic annotation: expertise integration in a new software platform
-
Gouret P, Vitiello V, Balandraud N, Gilles A, Pontarotti P, Danchin EGJ. FIGENIX: Intelligent automation of genomic annotation: expertise integration in a new software platform. BMC Bioinformatic 2005, 6:198., http://figenix2.up.univ-mrs.fr/Figenix/index.jsp
-
(2005)
BMC Bioinformatic
, vol.6
, pp. 198
-
-
Gouret, P.1
Vitiello, V.2
Balandraud, N.3
Gilles, A.4
Pontarotti, P.5
Danchin, E.G.J.6
-
10
-
-
7444263170
-
Statistical evidence for a more than 800-million-year-old evolutionarily conserved genomic region in our genome
-
10.1007/s00239-004-2648-1, 15693615
-
Danchin EGJ, Pontarotti P. Statistical evidence for a more than 800-million-year-old evolutionarily conserved genomic region in our genome. J Mol Evol 2004, 59:587-597. 10.1007/s00239-004-2648-1, 15693615.
-
(2004)
J Mol Evol
, vol.59
, pp. 587-597
-
-
Danchin, E.G.J.1
Pontarotti, P.2
-
11
-
-
0036578891
-
Evidence of en bloc duplication in vertebrate genomes
-
10.1038/ng855, 11967531
-
Abi-Rached L, Gilles A, Shiina T, Pontarotti P, Inoko H. Evidence of en bloc duplication in vertebrate genomes. Nat Genet 2002, 31:100-105. 10.1038/ng855, 11967531.
-
(2002)
Nat Genet
, vol.31
, pp. 100-105
-
-
Abi-Rached, L.1
Gilles, A.2
Shiina, T.3
Pontarotti, P.4
Inoko, H.5
-
12
-
-
0242468325
-
Evolution of the proto-MHC ancestral region: more evidence for the plesiomorphic organisation of human chromosome 9q34 region
-
10.1007/s00251-003-0601-x, 14530884
-
Vienne A, Shiina T, Abi-Rached L, Danchin E, Vitiello V, Cartault F, Inoko H, Pontarotti P. Evolution of the proto-MHC ancestral region: more evidence for the plesiomorphic organisation of human chromosome 9q34 region. Immunogenetics 2003, 55:429-436. 10.1007/s00251-003-0601-x, 14530884.
-
(2003)
Immunogenetics
, vol.55
, pp. 429-436
-
-
Vienne, A.1
Shiina, T.2
Abi-Rached, L.3
Danchin, E.4
Vitiello, V.5
Cartault, F.6
Inoko, H.7
Pontarotti, P.8
-
13
-
-
7244259101
-
Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype
-
10.1038/nature03025, 15496914
-
Jaillon O, Aury JM, Brunet F. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 2004, 431:946-957. 10.1038/nature03025, 15496914.
-
(2004)
Nature
, vol.431
, pp. 946-957
-
-
Jaillon, O.1
Aury, J.M.2
Brunet, F.3
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