Use of surface plasmon-coupled emission to measure DNA hybridization

Journal of Biomolecular Screening

Volumn 9, Issue 3, 2004, Pages 208-215

  Malicka, Joanna ^a   Gryczynski, Ignacy ^a   Gryczynski, Zygmunt ^a   Lakowicz, Joseph R ^a  

^a UNIVERSITY OF MARYLAND   (United States)

Author keywords

Directional emission; DNA hybridization; Fluorescence; PDNA microarrays; Surface plasmon resonance; Surface plasmons

Indexed keywords

BIOTIN; DNA; OLIGONUCLEOTIDE; STREPTAVIDIN; CARBOCYANINE; CYANINE DYE 5; FLUORESCENT DYE;

ARTICLE; BIOTINYLATION; CHROMATOPHORE; DNA BINDING; DNA HYBRIDIZATION; EVALUATION; FILM; FLUOROPHORE; HYBRIDIZATION; MATHEMATICAL ANALYSIS; PRIORITY JOURNAL; RADIATION FIELD; RADIATION MEASUREMENT; SENSITIVITY ANALYSIS; SIGNAL DETECTION; SPECTRAL SENSITIVITY; SURFACE PLASMON RESONANCE; TIME; CHEMISTRY; GENETICS; METHODOLOGY; NUCLEIC ACID HYBRIDIZATION; OPTICS;

CARBOCYANINES; FLUORESCENT DYES; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDES; OPTICS; SURFACE PLASMON RESONANCE;

EID: 7044286202     PISSN: 10870571     EISSN: None     Source Type: Journal    
DOI: 10.1177/1087057103262363     Document Type: Article

References (17)

1. Le Pecq J-B, Le Bret M, Barbet J, Roques B: DNA polyintercalating drugs: DNA binding of diacridine derivatives. Proc Natl Acad Sci 1975;72(8):2915-2919.
2. Rye HS, Yue S, Wemmer DE, et al: Stable fluorescent complexes of double-stranded DNA with bis-intercalating asymmetric cyanine dyes: properties and applications. Nucleic Acids Res 1992;20(11):2803-2812.
3. Glazer AN, Peck K, Mathies RA: A stable double-stranded DNA ethidium homodimer complex: application to picogram fluorescence detection of DNA in agarose gels. Proc Natl Acad Sci USA 1990;87:3851-3855.
4. Benson SC, Mathies RA, Glazer AN: Heterodimeric DNA-binding dyes designed for energy transfer: stability and applications of the DNA complexes. Nucleic Acids Res 1993;21:5720-5726.
5. Lakowicz JR: Radiative decay engineering 3. Surface plasmon coupled directional emission. Anal Biochem, 2004;324(2):153-169.
6. Gryczynski I, Malicka J, Gryczynski Z, Lakowicz JR: Radiative decay engineering 4. Experimental studies of surface plasmon coupled directional emission. Anal Biochem, 2004;324(2):170-182.
7. Lakowicz JR, Malicka J, Gryczynski I, Gryczynski Z: Directional surface plasmon-coupled emission: a new method for high sensitivity detection. BBRC 2003;307:435-439.
8. Kurihara K, Suzuki K: Theoretical understanding of an absorption-based surface plasmon resonance sensor based on Kretschmann's theory. Anal Chem 2002;74:696-701.
9. Salamon Z, Macleod HA, Tollin G: Surface plasmon resonance spectroscopy as a tool for investigating the biochemical and biophysical properties of membrane protein systems. I. Theoretical principles. Biochem et Biophys Acta 1997;1331:117-129.
10. Raether H: Surface Plasmons on Smooth and Rough Surfaces and on Gratings. New York: Springer Verlag, 1988.
11. Forstmann F, Gerhardts RR: Metal Optics Near the Plasma Frequency. New York: Springer-Verlag, 1986, vol 109.
12. Frutos AG, Corn RM: SPR of ultra thin organic films. Anal Chem 1999;449A-455A.
13. Neumann T, Johansson ML, Kambhampati D, Knoll W: Surface-plasmon fluorescence spectroscopy. Adv Funct Mater 2002;12:9-575-586.
14. Liebermann T, Knoll W: Surface-plasmon field-enhanced fluorescence spectroscopy. Colloids Surfaces 2000;171:115-130.
15. Weber WH, Eagen CF. Energy transfer from an excited dye molecule to the surface plasmons of an adjacent metal. Optics Letts 1979;4(8):236-238.
16. Kolomenskii AA, Gershon PD, Schuessler HA. Sensitivity and detection limit of concentration and adsorption measurements by laser-induced surface-plasmon resonance. Appl Optics 1997;36(25):6539-6547.
17. Gryczynski I, Malicka J, Gryczynski Z, Lakowicz JR. Surface plasmon-coupled emission using gold films. J Phys Chem B, submitted.