Genetic categorization of Echinococcus granulosus from humans and herbivorous hosts in Iran using an integrated mutation scanning-phylogenetic approach

Electrophoresis

Volumn 30, Issue 15, 2009, Pages 2648-2655

  Sharbatkhori, Mitra ^a,b   Mirhendi, Hossein ^b   Jex, Aaron R ^a   Pangasa, Aradhana ^a   Campbell, Bronwyn E ^a   Kia, Eshrat B ^b   Eshraghian, Mohammad R ^b   Harandi, Majid F ^c   Gasser, Robin B ^a  

^a UNIVERSITY OF MELBOURNE   (Australia)

^b TEHRAN UNIVERSITY OF MEDICAL SCIENCES   (Iran)

^c KERMAN UNIVERSITY OF MEDICAL SCIENCES   (Iran)

Author keywords

Echinococcus granulosus; Genetic structure; Iran; Mitochondrial gene; Taeniidae

Indexed keywords

BAYESIAN NETWORKS; GENES; INFERENCE ENGINES; MAMMALS; POLYMERASE CHAIN REACTION;

AMPLICONS; ECHINOCOCCUS GRANULOSUS; EXPERIMENTAL INVESTIGATIONS; GENETIC STRUCTURE; IRAN; MITOCHONDRIAL GENES; PHYLOGENETIC ANALYSIS; PHYLOGENETIC APPROACH; SEQUENCE DATA; TENIIDA;

MAXIMUM LIKELIHOOD;

CYTOCHROME C OXIDASE; CYTOCHROME C OXIDASE 1; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE 1; UNCLASSIFIED DRUG; MITOCHONDRIAL PROTEIN;

AMPLICON; ARTICLE; CAMEL; CATTLE; CONTROLLED STUDY; ECHINOCOCCUS GRANULOSUS; ELECTROPHORESIS; GENE EXPRESSION PROFILING; GENE LOCUS; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC VARIABILITY; GOAT; HOST PARASITE INTERACTION; HUMAN; IRAN; MUTATIONAL ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PARASITE ISOLATION; PHYLOGENY; POINT MUTATION; POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; SHEEP; TAENIA SAGINATA; ANIMAL; ANIMAL DISEASE; ECHINOCOCCOSIS; GENETICS; GENOTYPE; GEOGRAPHY; HAPLOTYPE; ISOLATION AND PURIFICATION; METHODOLOGY; MOLECULAR GENETICS; PARASITOLOGY; SEQUENCE ALIGNMENT;

ANIMALS; BASE SEQUENCE; DNA MUTATIONAL ANALYSIS; ECHINOCOCCOSIS; ECHINOCOCCUS GRANULOSUS; ELECTRON TRANSPORT COMPLEX IV; GENOTYPE; GEOGRAPHY; HAPLOTYPES; HUMANS; IRAN; MITOCHONDRIAL PROTEINS; MOLECULAR SEQUENCE DATA; NADH DEHYDROGENASE; PHYLOGENY; SEQUENCE ALIGNMENT; TAENIA SAGINATA;

EID: 70350749662     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.200900145     Document Type: Article

References (37)

1. Thompson, R. C. A., Exp. Parasitol. 2008, 119, 439-446.
2. McManus, D. P., Parasitol. Int. 2006, 55, S31-S37.
3. Saarma, U., Jõgisalu, I., Moks, E., Varcasia, A., Lavikainen, A., Oksanen, A., Simsek, S. et al., Parasitology 2009, 21, 1-12.
4. Thompson, R. C., McManus, D. P., Trends. Parasitol. 2002, 18, 452-457.
5. McManus, D. P., Thompson, R. C., Parasitology 2003, 127, S37-S51.
6. Zhang, L., Eslami, A., Hosseini, S. H., McManus, D. P., Am. J. Trop. Med. Hyg. 1998b, 59, 171-174.
7. Harandi, M. F., Hobbs, R. P., Adams, P. J., Mobedi, I., Morgan-Ryan, U. M., Thompson, R. C. A., Parasitology 2002, 125, 367-373.
8. Jamali, R., Ghazanchaei, A., Asgharzadeh, M., J. Parasit. Dis. 2004, 28, 69-72.
9. Ahmadi, N., Dalimi, A., Infect. Genet. Evol. 2006, 6, 85-90.
10. Rostami Nejad, M., Nazemalhosseini, M. E., Nochi, Z., Fasihi Harandi, M. M., Cheraghipour, K., Mowlavi, G. R., Zali, M. R., J. Helminthol. 2008, 82, 343-347.
11. Karimi, A., Dianatpour, R., Biotechnology 2008, 7, 757-762.
12. Bowles, J., Blair, D., McManus, D. P., Mol. Biochem. Parasitol. 1992, 54, 165-173.
13. Gasser, R. B., Hu, M., Chilton, N. B., Campbell, B. E., Jex, A. J., Otranto, D., Cafarchia, C. et al., Nat. Protoc. 2006, 1, 3121-3128.
14. Hall, T. A., Nucleic Acids Symp. Ser. 1999, 41, 95-98.
15. Bowles, J., McManus, D. P., Int. J. Parasitol. 1993, 23, 969-972.
16. Bowles, J., Blair, D., McManus, D. P., Parasitology 1994, 109, 215-221.
17. Bowles, J., McManus, D. P., Am. J. Trop. Med. Hyg. 1994, 50, 33-44.
18. Gasser, R. B., Zhu, X., McManus, D. P., Int. J. Parasitol. 1999, 29, 1965-1970.
19. Le, T. H., Pearson, M. S., Blair, D., Dai, N., Zhang, L. H., McManus, D. P., Parasitology 2002, 124, 97-112.
20. Chilton, N. B., Gasser, R. B., Beveridge, I., Int. J. Parasitol. 1995, 25, 647-651.
21. Page, R. D., Comput. Appl. Biosci. 1996, 12, 357-358.
22. Swofford, D. L., PAUP* beta version. Phylogenetic Analysis Using Parsimony (*and other methods). Sinauer Associated, Sunderland, MA 2002.
23. Obwaller, A., Schneider, R., Walochnik, J., Gollackner, B., Deutz, A., Janitschke, K., Aspock, H. et al., Parasitology 2004, 128, 569-575.
24. Vural, G., Baca, A. U., Gauci, C. G., Bagci, O., Gicik, Y., Lightowlers, M. W., Vet. Parasitol. 2008, 154, 347-350.
25. Lavikainen, A., Haukisalmi, V., Lehtinen, M. J., Henttonen, H., Oksanen, A., Meri, S., Parasitology 2008, 135, 1457-1467.
26. Nakao, M., McManus, D. P., Schantz, P. M., Craig, P. S., Ito, A., Parasitology 2007, 134, 713-722.
27. Hüttner, M., Nakao, M., Wassermann, T., Siefert, L., Boomker, J. D. A., Sako, Y. et al., Int. J. Parasitol. 2008, 38, 861-868.
28. Moks, E., Jõgisalu, I., Valdmann, H., Saarma, U., Parasitology 2008, 135, 647-654.
29. Zhang, L. H., Chai, J. J., Jiao, W., Osman, Y., McManus, D. P., Parasitology 1998a, 116, 29-33.
30. Bardonnet, K., Piarroux, R., Dia, L., Schneegans, F., Beurdeley, A., Godot, V., Vuitton, D. A., Trans. R. Soc. Trop. Med. Hyg. 2002, 96, 383-386.
31. Kamenetzky, L., Gutierrez, A. M., Canova, S. G., Haag, K. L., Guarnera, Parra, A., Garcia, G. E., Infect. Genet. Evol. 2002, 2, 129-136.
32. Haag, K. L., Ayala, F. J., Kamenetzky, L., Gutierrez, A. M., Rosenzvit, M., J. Parasitol. 2004, 90, 234-239.
33. Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., Berka, J. et al., Nature 2005, 437, 376-380.
34. Jex, A. R., Hu, M., Littlewood, D. T. J., Waeschenbach, A., Gasser, R. B., BMC Genomics 2008, 9, 11.
35. Jex, A. R., Waeschenbach, A., Hu, M., van Wyk, J. A., Beveridge, I., Littlewood, D. T. J., Gasser, R. B., BMC Genomics 2009, 10, 79.
36. Varcasia, A., Canu, S., Kogkos, A., Pipia, A. P., Scala, A., Grappia, G., Seimenis, A., Parasitol. Res. 2007, 101, 1135-1139.
37. Lavikainen, A., Lehtinen, M. J., Meri, T., Hirvela-Koski, V., Meri, S., Parasitology 2003, 127, 207-215.