Identification of starmaker-like in medaka as a putative target gene of Pax2 in the otic vesicle

Developmental Dynamics

Volumn 238, Issue 11, 2009, Pages 2860-2866

  Bajoghli, Baubak ^a   Ramialison, Mirana ^b,c   Aghaallaei, Narges ^a   Czerny, Thomas ^d,e   Wittbrodt, Joachim ^b,c  

^a MAX PLANCK INSTITUTE OF IMMUNOBIOLOGY AND EPIGENETICS   (Germany)

^b UNIVERSITY OF HEIDELBERG   (Germany)

^c KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

^d UNIVERSITY OF VETERINARY MEDICINE   (Austria)

^e Fachhochschule Campus Wien   (Austria)

Author keywords

Dspp; Medaka; Otic vesicle; Otoliths; Starmaker; Zebrafish

Indexed keywords

TRANSCRIPTION FACTOR PAX2;

ARTICLE; EMBRYO DEVELOPMENT; GENE; GENE EXPRESSION; GENE IDENTIFICATION; GENE SEQUENCE; GENE STRUCTURE; GENE TARGETING; GENOMICS; GILL; KIDNEY; NONHUMAN; NUCLEOTIDE SEQUENCE; ORYZIAS; OTOLITH; PRIORITY JOURNAL; STARMAKER-LIKE GENE; TOOTH;

AMINO ACID SEQUENCE; ANIMALS; EMBRYO, NONMAMMALIAN; FISH PROTEINS; MOLECULAR SEQUENCE DATA; ORYZIAS; OTOLITHIC MEMBRANE; PAX2 TRANSCRIPTION FACTOR;

DANIO RERIO; ORYZIINAE; OSTEICHTHYES;

EID: 70350743146     PISSN: 10588388     EISSN: 10970177     Source Type: Journal    
DOI: 10.1002/dvdy.22093     Document Type: Article

References (25)

1. Aghaallaei N, Bajoghli B, Walter I, Czerny T. 2005. Duplicated members of the Groucho/Tle gene family in fish. Dev Dyn 234:143-150. (Pubitemid 41192758)
2. Aghaallaei N, Bajoghli B, Czerny T. 2007. Distinct roles of Fgf8, Foxi1, Dlx3b and Pax8/2 during otic vesicle induction and maintenance in medaka. Dev Biol 307:408-420.
3. Ahsan B, Kobayashi D, Yamada T, Kasahara M, Sasaki S, Saito TL, Nagayasu Y, Doi K, Nakatani Y, Qu W, Jindo T, Shimada A, Naruse K, Toyoda A, Kuroki Y, Fujiyama A, Sasaki T, Shimizu A, Asakawa S, Shimizu N, Hashimoto S, Yang J, Lee Y, Matsushima K, Sugano S, Sakaizumi M, Narita T, Ohishi K, Haga S, Ohta F, Nomoto H, Nogata K, Morishita T, Endo T, Shin IT, Takeda H, Kohara Y, Morishita S. 2008. UTGB/medaka: genomic resource database for medaka biology. Nucleic Acids Res 36:D747-D752. (Pubitemid 351149818)
4. Borelli G, Mayer-Gostan N, De Pontual H, Boeuf G, Payan P. 2001. Biochemical relationships between endolymph and otolith matrix in the trout (Oncorhynchus mykiss) and turbot (Psetta maxima). Calcif Tissue Int 69:356-364. (Pubitemid 34056799)
5. Czerny T, Busslinger M. 1995. DNA-binding and transactivation properties of Pax-6: three amino acids in the paired domain are responsible for the different sequence recognition of Pax-6 and BSAP (Pax-5). Mol Cell Biol 15:2858-2871.
6. Haddon C, Mowbray C, Whitfield T, Jones D, Gschmeissner S, Lewis J. 1999. Hair cells without supporting cells: further studies in the ear of the zebrafish mind bomb mutant. J Neurocytol 28:837-850. (Pubitemid 30617133)
7. Hans S, Liu D, Westerfield M. 2004. Pax8 and Pax2a function synergistically in otic specification, downstream of the Foxi1 and Dlx3b transcription factors. Development 131:5091-5102. (Pubitemid 39485365)
8. Hardison AL, Lichten L, Banerjee-Basu S, Becker TS, Burgess SM. 2005. The zebrafish gene claudinj is essential for normal ear function and important for the formation of the otoliths. Mech Dev 122:949-958. (Pubitemid 40961555)
9. Haruyama N, Sreenath TL, Suzuki S, Yao X, Wang Z, Wang Y, Honeycutt C, Iozzo RV, Young MF, Kulkarni AB. 2009. Genetic evidence for key roles of decorin and biglycan in dentin mineralization. Matrix Biol 28:129-136.
10. Hubbard TJ, Aken BL, Ayling S, Ballester B, Beal K, Bragin E, Brent S, Chen Y, Clapham P, Clarke L, Coates G, Fairley S, Fitzgerald S, Fernandez-Banet J, Gordon L, Graf S, Haider S, Hammond M, Holland R, Howe K, Jenkinson A, Johnson N, Kahari A, Keefe D, Keenan S, Kinsella R, Kokocinski F, Kulesha E, Lawson D, Longden I, Megy K, Meidl P, Overduin B, Parker A, Pritchard B, Rios D, Schuster M, Slater G, Smedley D, Spooner W, Spudich G, Trevanion S, Vilella A, Vogel J, White S, Wilder S, Zadissa A, Birney E, Cunningham F, Curwen V, Durbin R, Fernandez-Suarez XM, Herrero J, Kasprzyk A, Proctor G, Smith J, Searle S, Flicek P. 2009. Ensembl 2009. Nucleic Acids Res 37:D690-D697.
11. Hurle B, Ignatova E, Massironi SM, Mashimo T, Rios X, Thalmann I, Thalmann R, Ornitz DM. 2003. Non-syndromic vestibular disorder with otoconial agenesis in tilted/mergulhador mice caused by mutations in otopetrin 1. Hum Mol Genet 12:777-789. (Pubitemid 36416964)
12. Iwamatsu T. 2004. Stages of normal development in the medaka Oryzias latipes. Mech Dev 121:605-618.
13. Mackereth MD, Kwak SJ, Fritz A, Riley BB. 2005. Zebrafish pax8 is required for otic placode induction and plays a redundant role with Pax2 genes in the maintenance of the otic placode. Development 132:371-382. (Pubitemid 40268286)
14. Quiring R,Wittbrodt B, Henrich T, Ramialison M, Burgtorf C, Lehrach H, Wittbrodt J. 2004. Large-scale expression screening by automated whole-mount in situ hybridization. Mech Dev 121:971-976.
15. Ramialison M, Bajoghli B, Aghaallaei N, Ettwiller L, Gaudan S, Wittbrodt B, Czerny T, Wittbrodt J. 2008. Rapid identification of PAX2/5/8 direct downstream targets in the otic vesicle by combinatorial use of bioinformatics tools. Genome Biol 9:R145.
16. Riley BB, Zhu C, Janetopoulos C, Aufderheide KJ. 1997. A critical period of ear development controlled by distinct populations of ciliated cells in the zebra-fish. Dev Biol 191:191-201. (Pubitemid 28282906)
17. Riley BB, Chiang M, Farmer L, Heck R. 1999. The deltaA gene of zebrafish mediates lateral inhibition of hair cells in the inner ear and is regulated by pax2.1. Development 126:5669-5678. (Pubitemid 30035015)
18. Söllner C, Burghammer M, Busch-Nentwich E, Berger J, Schwarz H, Riekel C, Nicolson T. 2003. Control of crystal size and lattice formation by starmaker in otolith biomineralization. Science 302:282-286. (Pubitemid 37248758)
19. Söllner C, Schwarz H, Geisler R, Nicolson T. 2004. Mutated otopetrin 1 affects the genesis of otoliths and the localization of Starmaker in zebrafish. Dev Genes Evol 214:582-590. (Pubitemid 40017352)
20. Sreenath T, Thyagarajan T, Hall B, Longenecker G, D'souza R, Hong S, Wright JT, MacDougall M, Sauk J, Kulkarni AB. 2003. Dentin sialophosphoprotein knockout mouse teeth display widened predentin zone and develop defective dentin mineralization similar to human dentinogenesis imperfecta type III. J Biol Chem 278:24874-24880.
21. Thermes V, Grabher C, Ristoratore F, Bourrat F, Choulika A, Wittbrodt J, Joly JS. 2002. I-SceI meganuclease mediates highly efficient transgenesis in fish. Mech Dev 118:91-98. (Pubitemid 35292124)
22. Torres M, Gomez-Pardo E, Gruss P. 1996. Pax2 contributes to inner ear patterning and optic nerve trajectory. Development 122:3381-3391.
23. Whitfield TT, Riley BB, Chiang MY, Phillips B. 2002. Development of the zebrafish inner ear. Dev Dyn 223:427-458.
24. Xiao S, Yu C, Chou X, Yuan W, Wang Y, Bu L, Fu G, Qian M, Yang J, Shi Y, Hu L, Han B, Wang Z, Huang W, Liu J, Chen Z, Zhao G, Kong X. 2001. Dentinogenesis imperfecta 1 with or without progressive hearing loss is associated with distinct mutations in DSPP. Nat Genet 27:201-204.
25. Zhang XA, Bontrager AL, Hemler ME. 2001. Transmembrane-4 superfamily proteins associate with activated protein kinase C (PKC) and link PKC to specific beta(1) integrins. J Biol Chem 276:25005-25013.