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Volumn 59, Issue 10, 2009, Pages 2538-2545

Methylovirgula ligni gen. nov., sp. nov., a nobligately acidophilic, facultatively methylotrophic bacterium with a highly divergent mxaF gene

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL; BACTERIAL DNA; BACTERIAL PROTEIN; CYTOSINE; FATTY ACID; GUANINE; MALIC ACID; METHANOL; METHANOL DEHYDROGENASE; PROTEIN MXAF; PYRUVIC ACID; QUINONE DERIVATIVE; RNA 16S; UNCLASSIFIED DRUG;

EID: 70350735910     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.010074-0     Document Type: Article
Times cited : (40)

References (29)
  • 1
    • 0021947993 scopus 로고
    • Methanol formation during lignin degradation by Phanerochaete chrysosporium
    • Ander, P. & Eriksson, K.-E. (1984). Methanol formation during lignin degradation by Phanerochaete chrysosporium. Appl Microbiol Biotechnol 21, 96-102.
    • (1984) Appl Microbiol Biotechnol , vol.21 , pp. 96-102
    • Ander, P.1    Eriksson, K.-E.2
  • 2
    • 70350702513 scopus 로고    scopus 로고
    • The genus Beijerinckia
    • 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • Becking, J. H. (2006). The genus Beijerinckia. In The Prokaryotes, 3rd edn, vol. 5, pp. 151-162. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes , vol.5 , pp. 151-162
    • Becking, J.H.1
  • 3
    • 77956867761 scopus 로고
    • Analysis of isoprenoid quinones
    • Collins, M. D. (1985). Analysis of isoprenoid quinones. Methods Microbiol 18, 329-366.
    • (1985) Methods Microbiol , vol.18 , pp. 329-366
    • Collins, M.D.1
  • 4
    • 0032746991 scopus 로고    scopus 로고
    • Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments
    • Costello, A. M. & Lidstrom, M. E. (1999). Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments. Appl EnvironMicrobiol 65, 5066-5074.
    • (1999) Appl EnvironMicrobiol , vol.65 , pp. 5066-5074
    • Costello, A.M.1    Lidstrom, M.E.2
  • 5
    • 0034075034 scopus 로고    scopus 로고
    • Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs
    • Dedysh, S. N., Liesack, W., Khmelenina, V. N., Suzina, N. E., Trotsenko, Y. A., Semrau, J. D., Bares, A. M., Panikov, N. S. & Tiedje, J. M. (2000). Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs. Int J Syst Evol Microbiol 50, 955-969.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 955-969
    • Dedysh, S.N.1    Liesack, W.2    Khmelenina, V.N.3    Suzina, N.E.4    Trotsenko, Y.A.5    Semrau, J.D.6    Bares, A.M.7    Panikov, N.S.8    Tiedje, J.M.9
  • 6
    • 0036151243 scopus 로고    scopus 로고
    • Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog
    • Dedysh, S. N., Khmelenina, V. N., Suzina, N. E., Trotsenko, Y. A., Semrau, J. D., Liesack, W. & Tiedje, J. M. (2002). Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog. Int J Syst Evol Microbiol 52, 251-261.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 251-261
    • Dedysh, S.N.1    Khmelenina, V.N.2    Suzina, N.E.3    Trotsenko, Y.A.4    Semrau, J.D.5    Liesack, W.6    Tiedje, J.M.7
  • 8
    • 2942530573 scopus 로고    scopus 로고
    • NifH and NifD phylogenies: A molecular basis for understanding nitrogen fixation capabilities of methanotrophic bacteria
    • Dedysh, S. N., Ricke, P. & Liesack, W. (2004b). NifH and NifD phylogenies: a molecular basis for understanding nitrogen fixation capabilities of methanotrophic bacteria. Microbiology 150, 1301-1313.
    • (2004) Microbiology , vol.150 , pp. 1301-1313
    • Dedysh, S.N.1    Ricke, P.2    Liesack, W.3
  • 10
    • 21144452445 scopus 로고    scopus 로고
    • Methylocella species are facultatively methanotrophic
    • Dedysh, S. N., Knief, C. & Dunfield, P. (2005b). Methylocella species are facultatively methanotrophic. J Bacteriol 187 , 4665-4670.
    • (2005) J Bacteriol , vol.187 , pp. 4665-4670
    • Dedysh, S.N.1    Knief, C.2    Dunfield, P.3
  • 12
    • 0141614747 scopus 로고    scopus 로고
    • Methylocella silvestris sp. nov., a novel methanotrophic bacterium isolated from an acidic forest cambisol
    • Dunfield, P. F., Khmelenina, V. N., Suzina, N. E., Trotsenko, Y. A. & Dedysh, S. N. (2003). Methylocella silvestris sp. nov., a novel methanotrophic bacterium isolated from an acidic forest cambisol. Int J Syst Evol Microbiol 53, 1231-1239.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1231-1239
    • Dunfield, P.F.1    Khmelenina, V.N.2    Suzina, N.E.3    Trotsenko, Y.A.4    Dedysh, S.N.5
  • 13
    • 0034256081 scopus 로고    scopus 로고
    • Characterization of methanotrophic bacteria on the basis of intact phospholipid profiles
    • Fang, J., Barcelona, M. J. & Semrau, J. D. (2000). Characterization of methanotrophic bacteria on the basis of intact phospholipid profiles. FEMS Microbiol Lett 189, 67-72.
    • (2000) FEMS Microbiol Lett , vol.189 , pp. 67-72
    • Fang, J.1    Barcelona, M.J.2    Semrau, J.D.3
  • 14
    • 38049139296 scopus 로고    scopus 로고
    • Impact of white-rot fungi on numbers and community composition of bacteria colonizing beech wood from forest soil
    • Folman, L. B., Klein Gunnewiek, P. J. A., Boddy, L. & de Boer, W. (2008). Impact of white-rot fungi on numbers and community composition of bacteria colonizing beech wood from forest soil. FEMS Microbiol Ecol 63, 181-191.
    • (2008) FEMS Microbiol Ecol , vol.63 , pp. 181-191
    • Folman, L.B.1    Klein Gunnewiek, P.J.A.2    Boddy, L.3    de Boer, W.4
  • 15
    • 0028791540 scopus 로고
    • Evidence that particulate methane monooxygenase and ammonium monooxygenase may be evolutionarily related
    • Holmes, A. J., Costello, A., Lidstrom, M. E. & Murrell, J. C. (1995). Evidence that particulate methane monooxygenase and ammonium monooxygenase may be evolutionarily related. FEMS Microbiol Lett 132, 203-208.
    • (1995) FEMS Microbiol Lett , vol.132 , pp. 203-208
    • Holmes, A.J.1    Costello, A.2    Lidstrom, M.E.3    Murrell, J.C.4
  • 17
    • 29144453498 scopus 로고    scopus 로고
    • Reclassification of Methylobacterium chloromethanicum and Methylobacterium dichloromethanicum as later subjective synonyms of Methylobacterium extorquens and of Methylobacterium lusitanum as a later subjective synonym of Methylobacterium rhodesianum
    • Kato, Y., Asahara, M., Arai, D., Goto, K. & Yokota, A. (2005). Reclassification of Methylobacterium chloromethanicum and Methylobacterium dichloromethanicum as later subjective synonyms of Methylobacterium extorquens and of Methylobacterium lusitanum as a later subjective synonym of Methylobacterium rhodesianum. J Gen Appl Microbiol 51, 287-299.
    • (2005) J Gen Appl Microbiol , vol.51 , pp. 287-299
    • Kato, Y.1    Asahara, M.2    Arai, D.3    Goto, K.4    Yokota, A.5
  • 18
    • 47049106678 scopus 로고    scopus 로고
    • Methylobacterium persicinum sp. nov., Methylobacterium komagatae sp. nov., Methylobacterium brachiatum sp. nov., Methylobacterium tardum sp. nov. and Methylobacterium gregans sp. nov., isolated from freshwater
    • Kato, Y., Asahara, M., Goto, K., Kasai, H. & Yokota, A. (2008). Methylobacterium persicinum sp. nov., Methylobacterium komagatae sp. nov., Methylobacterium brachiatum sp. nov., Methylobacterium tardum sp. nov. and Methylobacterium gregans sp. nov., isolated from freshwater. Int J Syst Evol Microbiol 58, 1134-1141.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1134-1141
    • Kato, Y.1    Asahara, M.2    Goto, K.3    Kasai, H.4    Yokota, A.5
  • 19
    • 0038221311 scopus 로고    scopus 로고
    • Quantitative detection of methanotrophs in soil by novel pmoA-targeted real-time PCR assays
    • Kolb, S., Knief, C., Stubner, S. & Conrad, R. (2003). Quantitative detection of methanotrophs in soil by novel pmoA-targeted real-time PCR assays. Appl Environ Microbiol 69, 2423-2429.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2423-2429
    • Kolb, S.1    Knief, C.2    Stubner, S.3    Conrad, R.4
  • 20
    • 50949113703 scopus 로고    scopus 로고
    • Aerobic methylotrophic prokaryotes
    • 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • Lidstrom, M. E. (2006). Aerobic methylotrophic prokaryotes. In The Prokaryotes, 3rd edn, vol. 2, pp. 618-634. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes , vol.2 , pp. 618-634
    • Lidstrom, M.E.1
  • 21
    • 2542523843 scopus 로고    scopus 로고
    • Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S., Jobb, G. & other authors (2004). ARB: a software environment for sequence data. Nucleic Acids Res 32, 1363-1371.
    • Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S., Jobb, G. & other authors (2004). ARB: a software environment for sequence data. Nucleic Acids Res 32, 1363-1371.
  • 22
    • 0030872092 scopus 로고    scopus 로고
    • The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs
    • McDonald, I. R. & Murrell, J. C. (1997). The methanol dehydrogenase structural gene mxaF and its use as a functional gene probe for methanotrophs and methylotrophs. Appl Environ Microbiol 63, 3218-3224.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 3218-3224
    • McDonald, I.R.1    Murrell, J.C.2
  • 23
    • 0014460729 scopus 로고
    • Determination of base composition from melting profiles in dilute buffers
    • Owen, R. J., Lapage, S. P. & Hill, L. R. (1969). Determination of base composition from melting profiles in dilute buffers. Biopolymers 7, 503-516.
    • (1969) Biopolymers , vol.7 , pp. 503-516
    • Owen, R.J.1    Lapage, S.P.2    Hill, L.R.3
  • 24
    • 0034628432 scopus 로고    scopus 로고
    • Stable-isotope probing as a tool in microbial ecology
    • Radajewski, S., Ineson, P., Parekh, N. R. & Murrell, J. C. (2000). Stable-isotope probing as a tool in microbial ecology. Nature 403, 646-649.
    • (2000) Nature , vol.403 , pp. 646-649
    • Radajewski, S.1    Ineson, P.2    Parekh, N.R.3    Murrell, J.C.4
  • 26
    • 52649114611 scopus 로고
    • The use of lead citrate at high pH as an electron opaque stain in electron microscopy
    • Reynolds, E. S. (1963). The use of lead citrate at high pH as an electron opaque stain in electron microscopy. J Cell Biol 17, 208-212.
    • (1963) J Cell Biol , vol.17 , pp. 208-212
    • Reynolds, E.S.1
  • 28
    • 0032766120 scopus 로고    scopus 로고
    • Acetone, methanol, and other partially oxidized volatile organic emissions from dead plant matter by abiological processes: Significance for atmospheric chemistry
    • Warneke, C., Karl, T., Judmaier, H., Hansel, A., Jordan, A., Lindinger, W. & Crutzen, P. J. (1999). Acetone, methanol, and other partially oxidized volatile organic emissions from dead plant matter by abiological processes: significance for atmospheric chemistry. J Geophys Res 13, 9-18.
    • (1999) J Geophys Res , vol.13 , pp. 9-18
    • Warneke, C.1    Karl, T.2    Judmaier, H.3    Hansel, A.4    Jordan, A.5    Lindinger, W.6    Crutzen, P.J.7
  • 29
    • 0026067797 scopus 로고
    • 16S ribosomal DNA amplification for phylogenetic study
    • Weisburg, W. G., Barns, S. M., Pelletier, D. A. & Lane, D. J. (1991). 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173, 697-703.
    • (1991) J Bacteriol , vol.173 , pp. 697-703
    • Weisburg, W.G.1    Barns, S.M.2    Pelletier, D.A.3    Lane, D.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.