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Volumn 59, Issue 3, 2009, Pages 569-573

Psychroflexus sediminis sp. nov., a mesophilic bacterium isolated from salt lake sediment in China

Author keywords

[No Author keywords available]

Indexed keywords

MENAQUINONE; RIBOSOME RNA; RNA 16S;

EID: 70350674082     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.003269-0     Document Type: Article
Times cited : (20)

References (28)
  • 1
    • 0035989637 scopus 로고    scopus 로고
    • Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
    • Bernardet, J.-F., Nakagawa, Y. & Holmes, B. (2002). Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52, 1049-1070.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1049-1070
    • Bernardet, J.-F.1    Nakagawa, Y.2    Holmes, B.3
  • 2
    • 0031777276 scopus 로고    scopus 로고
    • Bowman, J. P., McCammon, S. A., Lewis, T., Skerratt, J. H., Brown, J. L., Nichols, D. S. & McMeekin, T. A. (1998). Psychroflexus torquis gen. nov., sp. nov., a psychrophilic species from Antarctic sea ice, and reclassification of Flavobacterium gondwanense (Dobson et al. 1993) as Psychroflexus gondwanense gen. nov., comb. nov. Microbiology 144, 1601-1609.
    • Bowman, J. P., McCammon, S. A., Lewis, T., Skerratt, J. H., Brown, J. L., Nichols, D. S. & McMeekin, T. A. (1998). Psychroflexus torquis gen. nov., sp. nov., a psychrophilic species from Antarctic sea ice, and reclassification of Flavobacterium gondwanense (Dobson et al. 1993) as Psychroflexus gondwanense gen. nov., comb. nov. Microbiology 144, 1601-1609.
  • 3
  • 7
    • 0027466234 scopus 로고
    • Direct sequencing of the polymerase chain reaction-amplified 16S rRNA gene of Flavobacterium gondwanense sp. nov. and Flavobacterium salegens sp. nov., two new species from a hypersaline Antarctic lake
    • Dobson, S. J., Colwell, R. R., McMeekin, T. A. & Franzmann, P. D. (1993). Direct sequencing of the polymerase chain reaction-amplified 16S rRNA gene of Flavobacterium gondwanense sp. nov. and Flavobacterium salegens sp. nov., two new species from a hypersaline Antarctic lake. Int J Syst Bacteriol 43, 77-83.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 77-83
    • Dobson, S.J.1    Colwell, R.R.2    McMeekin, T.A.3    Franzmann, P.D.4
  • 8
    • 2942637816 scopus 로고    scopus 로고
    • Psychroflaxus tropicus sp. nov., an obligately halophilic Cytophaga-Flavobacterium-Bacteroides group bacterium from an Hawaiian hypersaline lake
    • Donachie, S. P., Bowman, J. P. & Alam, M. (2004). Psychroflaxus tropicus sp. nov., an obligately halophilic Cytophaga-Flavobacterium-Bacteroides group bacterium from an Hawaiian hypersaline lake. Int J Syst Evol Microbiol 54, 935-940.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 935-940
    • Donachie, S.P.1    Bowman, J.P.2    Alam, M.3
  • 9
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 10
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 11
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 12
    • 70350677723 scopus 로고    scopus 로고
    • Felsenstein, J, 1993, PHYLIP phylogenetic inference package, version 3.5. Distributed by the author. Department of Genetics, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP (phylogenetic inference package), version 3.5. Distributed by the author. Department of Genetics, University of Washington, Seattle, USA.
  • 13
    • 0018099415 scopus 로고
    • Rapid method for distinction of Gram-negative from Gram-positive bacteria
    • Gregersen, T. (1978). Rapid method for distinction of Gram-negative from Gram-positive bacteria. Eur J Appl Microbiol Biotechnol 5, 123-127.
    • (1978) Eur J Appl Microbiol Biotechnol , vol.5 , pp. 123-127
    • Gregersen, T.1
  • 14
    • 0030045573 scopus 로고    scopus 로고
    • Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall
    • Groth, L., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 234-239
    • Groth, L.1    Schumann, P.2    Weiss, N.3    Martin, K.4    Rainey, F.A.5
  • 15
    • 70350638427 scopus 로고    scopus 로고
    • Hopwood, D. A., Bibb, M. J., Chater, K. F., Kieser, T., Bruton, C. J., Kieser, H. M., Lydiate, D. J., Smith, C. P. & Ward, J. M. (1985). Preparation of chromosomal, plasmid and phage DNA. In Genetic Manipulation of Streptomyces - a Laboratory Manual, pp. 79-80. Norwich, UY, F. Crowe & Sons.
    • Hopwood, D. A., Bibb, M. J., Chater, K. F., Kieser, T., Bruton, C. J., Kieser, H. M., Lydiate, D. J., Smith, C. P. & Ward, J. M. (1985). Preparation of chromosomal, plasmid and phage DNA. In Genetic Manipulation of Streptomyces - a Laboratory Manual, pp. 79-80. Norwich, UY, F. Crowe & Sons.
  • 16
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 17
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • Kluge, A. G. & Farris, J. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
    • (1969) Syst Zool , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, J.S.2
  • 18
    • 3242810318 scopus 로고    scopus 로고
    • mEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). mEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 19
    • 77956816836 scopus 로고
    • Classical and rapid identification methods for medically important bacteria
    • Lányí, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1-67.
    • (1987) Methods Microbiol , vol.19 , pp. 1-67
    • Lányí, B.1
  • 20
    • 13244295541 scopus 로고    scopus 로고
    • Pontibacillus chungwhensis gen. nov., sp. nov., a moderately halophilic Gram-positive bacterium from a solar saltern in Korea
    • Lim, J.-M., Jeon, C. O., Song, S. M. & Kim, C.-J. (2005). Pontibacillus chungwhensis gen. nov., sp. nov., a moderately halophilic Gram-positive bacterium from a solar saltern in Korea. Int J Syst Evol Microbiol 55, 165-170.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 165-170
    • Lim, J.-M.1    Jeon, C.O.2    Song, S.M.3    Kim, C.-J.4
  • 21
    • 77956996468 scopus 로고
    • Use of ultraviolet absorbance-temperature profile for determining the guanine plus cytosine content of DNA
    • Mandel. M. & Marmur, J. (1968). Use of ultraviolet absorbance-temperature profile for determining the guanine plus cytosine content of DNA. Methods Enzymol 12B, 195-206.
    • (1968) Methods Enzymol , vol.12 B , pp. 195-206
    • Mandel, M.1    Marmur, J.2
  • 22
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saltou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saltou, N.1    Nei, M.2
  • 24
    • 0004469194 scopus 로고
    • . Analysis of pigments: Carotenoids and related polyenes
    • Edited by M. Goodfellow & A. G. O'Donnell. New York. John Wiley & Sons
    • Schmit, K., Connor, A. & Britton, G. (1994). Chapter 11. Analysis of pigments: carotenoids and related polyenes. In Chemical Methods in Prokaryotic Systematics, pp. 403-462. Edited by M. Goodfellow & A. G. O'Donnell. New York. John Wiley & Sons.
    • (1994) Chemical Methods in Prokaryotic Systematics , pp. 403-462
    • Schmit, K.1    Connor, A.2    Britton, G.3
  • 25
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 26
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 27
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24, 4876-4882.
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.