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Volumn 5267 LNBI, Issue , 2008, Pages 226-240

On computing the breakpoint reuse rate in rearrangement scenarios

Author keywords

[No Author keywords available]

Indexed keywords

BREAKPOINT; CLASSICAL SET; CURRENT DEFINITION; FORMAL PROPERTIES; GENOME REARRANGEMENTS; HUMAN GENOMES; MAMMALIAN GENOMES; MOUSE GENOME; NEW APPROACHES;

EID: 70350536712     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-87989-3_17     Document Type: Conference Paper
Times cited : (15)

References (16)
  • 1
    • 36949006683 scopus 로고    scopus 로고
    • Are there rearrangement hotspots in the human genome?
    • Alekseyev, M., Pevzner, P.A.: Are there rearrangement hotspots in the human genome? PLoS Comput. Biol. 3(11), e209 (2007)
    • (2007) PLoS Comput. Biol , vol.3 , Issue.11
    • Alekseyev, M.1    Pevzner, P.A.2
  • 2
    • 0030130366 scopus 로고    scopus 로고
    • Genome rearrangements and sorting by reversals
    • Bafna, V., Pevzner, P.: Genome rearrangements and sorting by reversals. SIAM J. Computing 25(2), 272-289 (1996)
    • (1996) SIAM J. Computing , vol.25 , Issue.2 , pp. 272-289
    • Bafna, V.1    Pevzner, P.2
  • 3
    • 33750264868 scopus 로고    scopus 로고
    • Bergeron, A., Mixtacki, J., Stoye, J.: A unifying view of genome rearrangements. In: Bücher, P., Moret, B.M.E. (eds.) WABI 2006. LNCS (LNBI), 4175, pp. 163-173. Springer, Heidelberg (2006)
    • Bergeron, A., Mixtacki, J., Stoye, J.: A unifying view of genome rearrangements. In: Bücher, P., Moret, B.M.E. (eds.) WABI 2006. LNCS (LNBI), vol. 4175, pp. 163-173. Springer, Heidelberg (2006)
  • 4
    • 45849126475 scopus 로고    scopus 로고
    • Bergeron, A.,Mixtacki, J., Stoye, J.: HP distance via Double Cut and Join distance. In: Ferragina, P., Landau, G.M. (eds.) CPM 2008. LNCS, 5029, pp. 56-68. Springer, Heidelberg (2008)
    • Bergeron, A.,Mixtacki, J., Stoye, J.: HP distance via Double Cut and Join distance. In: Ferragina, P., Landau, G.M. (eds.) CPM 2008. LNCS, vol. 5029, pp. 56-68. Springer, Heidelberg (2008)
  • 5
    • 0029493079 scopus 로고
    • Transforming men into mice (polynomial algorithm for genomic distance problem)
    • Hannenhalli, S., Pevzner, P.A.: Transforming men into mice (polynomial algorithm for genomic distance problem). In: Proceedings of FOCS 1995, pp. 581-592 (1995)
    • (1995) Proceedings of FOCS 1995 , pp. 581-592
    • Hannenhalli, S.1    Pevzner, P.A.2
  • 6
    • 34447289460 scopus 로고    scopus 로고
    • Genome rearrangements: A correct algorithm for optimal capping
    • Jean, G., Nikolski, M.: Genome rearrangements: a correct algorithm for optimal capping. Inf. Process. Lett. 104(1), 14-20 (2007)
    • (2007) Inf. Process. Lett , vol.104 , Issue.1 , pp. 14-20
    • Jean, G.1    Nikolski, M.2
  • 7
    • 0029185212 scopus 로고
    • Exact and approximation algorithms for sorting by reversals with application to genome rearrangement
    • Kececioglu, J.D., Sankoff, D.: Exact and approximation algorithms for sorting by reversals with application to genome rearrangement. Algorithmica 13(1/2), 180-210 (1995)
    • (1995) Algorithmica , vol.13 , Issue.1-2 , pp. 180-210
    • Kececioglu, J.D.1    Sankoff, D.2
  • 9
    • 0038271921 scopus 로고    scopus 로고
    • Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution
    • Pevzner, P., Tesler, G.: Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution. Proc. Natl. Acad. Sci. USA 100(13), 7672-7677 (2003)
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , Issue.13 , pp. 7672-7677
    • Pevzner, P.1    Tesler, G.2
  • 10
    • 0037700979 scopus 로고    scopus 로고
    • Transforming men into mice: The Nadeau-Taylor chromosomal breakage model revisited
    • Pevzner, P., Tesler, G.: Transforming men into mice: The Nadeau-Taylor chromosomal breakage model revisited. In: Proceedings of RECOMB 2003, pp. 247-256 (2003)
    • (2003) Proceedings of RECOMB , pp. 247-256
    • Pevzner, P.1    Tesler, G.2
  • 11
    • 84957615807 scopus 로고    scopus 로고
    • Sankoff, D.: Edit distances for genome comparison based on non-local operations. In: Apostolico, A., Galil, Z., Manber, U., Crochemore, M. (eds.) CPM 1992. LNCS, 644, pp. 121-135. Springer, Heidelberg (1992)
    • Sankoff, D.: Edit distances for genome comparison based on non-local operations. In: Apostolico, A., Galil, Z., Manber, U., Crochemore, M. (eds.) CPM 1992. LNCS, vol. 644, pp. 121-135. Springer, Heidelberg (1992)
  • 12
    • 23844460187 scopus 로고    scopus 로고
    • Chromosomal breakpoint reuse in genome sequence rearrangement
    • Sankoff, D., Trinh, P.: Chromosomal breakpoint reuse in genome sequence rearrangement. J. Comput. Biol. 12(6), 812-821 (2005)
    • (2005) J. Comput. Biol , vol.12 , Issue.6 , pp. 812-821
    • Sankoff, D.1    Trinh, P.2
  • 13
    • 0001637701 scopus 로고
    • A crossover reducer in Drosophila melanogaster due to inversion of a section of the third chromosome
    • Sturtevant, A.H.: A crossover reducer in Drosophila melanogaster due to inversion of a section of the third chromosome. Biologisches Zentralblatt 46(12), 697-702 (1926)
    • (1926) Biologisches Zentralblatt , vol.46 , Issue.12 , pp. 697-702
    • Sturtevant, A.H.1
  • 14
    • 0038658640 scopus 로고    scopus 로고
    • Efficient algorithms for multichromosomal genome rearrangements
    • Tesler, G.: Efficient algorithms for multichromosomal genome rearrangements. J. Comput. Syst. Sci. 65(3), 587-609 (2002)
    • (2002) J. Comput. Syst. Sci , vol.65 , Issue.3 , pp. 587-609
    • Tesler, G.1
  • 15
    • 0036211065 scopus 로고    scopus 로고
    • GRIMM: Genome rearrangements web server
    • Tesler, G.: GRIMM: Genome rearrangements web server. Bioinformatics 18(3), 492-493 (2002)
    • (2002) Bioinformatics , vol.18 , Issue.3 , pp. 492-493
    • Tesler, G.1
  • 16
    • 24044535485 scopus 로고    scopus 로고
    • Efficient sorting of genomic permutations by translocation, inversion and block interchange
    • Yancopoulos, S., Attie, O., Friedberg, R.: Efficient sorting of genomic permutations by translocation, inversion and block interchange. Bioinformatics 21(16), 3340-3346 (2005)
    • (2005) Bioinformatics , vol.21 , Issue.16 , pp. 3340-3346
    • Yancopoulos, S.1    Attie, O.2    Friedberg, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.