Development of single base extension-tags microarray for the detection of food-borne pathogens

Shengwu Gongcheng Xuebao/Chinese Journal of Biotechnology

Volumn 25, Issue 4, 2009, Pages 554-559

  Lu, Changyong ^a   Shi, Chunlei ^a   Zhang, Chunxiu ^b   Chen, Jing ^a   Shi, Xianming ^a,c  

^a SHANGHAI JIAO TONG UNIVERSITY   (China)

^b NATIONAL ENGINEERING CENTER FOR BIOCHIP AT SHANGHAI   (China)

^c Shanghai Engineering Research Center of Food Safety   (China)

Author keywords

Food borne pathogens; Microarray; Single base extension tags (SBE tags)

Indexed keywords

CAMPYLOBACTER JEJUNI; ENTEROBACTER; ESCHERICHIA COLI; LISTERIA MONOCYTOGENES; SALMONELLA; SALMONELLA TYPHIMURIUM; SHIGELLA; STAPHYLOCOCCUS AUREUS; VIBRIO PARAHAEMOLYTICUS;

ARTICLE; DNA MICROARRAY; FOOD CONTAMINATION; FOOD CONTROL; HUMAN; ISOLATION AND PURIFICATION; LISTERIA MONOCYTOGENES; METHODOLOGY; SALMONELLA TYPHIMURIUM; STAPHYLOCOCCUS AUREUS; VIBRIO PARAHAEMOLYTICUS;

FOOD CONTAMINATION; FOOD MICROBIOLOGY; HUMANS; LISTERIA MONOCYTOGENES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SALMONELLA TYPHIMURIUM; STAPHYLOCOCCUS AUREUS; VIBRIO PARAHAEMOLYTICUS;

EID: 70350497743     PISSN: 10003061     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (13)

1. Mead PS, Slutsker L, Dietz V, et al. Food-related illness and death in the united states. Emerg Infect Dis, 1999, 5(5): 607-625.
2. Liu XM, Chen Yan, Fan YX, et al. Foodborne diseases occurred in 2003-report of the national foodborne diseases surveillance system, China. J Hyg Res, 2006, 35(2): 201-204.
3. Kerr P, Chart H, Finlay D, et al. Development of a monoclonal sandwich ELISA for the detection of animal and human Escherichia coli O157 strains. J Appl Microbiol, 2001, 90(4): 543-549.
4. Warsen AE, Krug MJ, LaFrentz S, et al. Simultaneous discrimination between 15 fish pathogens by using 16S ribosomal DNA PCR and DNA microarrays. Appl Environ Microbiol, 2004, 70(7): 4216-4221.
5. Fedrigo O, Naylor G. A gene-specific DNA sequencing chip for exploring molecular evolutionary change. Nucleic Acids Res, 2004, 32(3): 1208-1213.
6. Chen SJ, Du WJ, Lu YQ, et al. Gene chip analysis of mutation of HBV-DNA open reading frame. Chin J Exp Clin Virol, 2004, 18(4): 373-376.
7. Moul JW, Segawa T, Xu LL, et al. cDNA microarray gene chip for prostate cancer and translational study in a prospective tissue bank and clinical longitudinal database. Prostate Cancer Prostatic Dis, 2000, 3(S1): S30.
8. Sturla LM, Fernandez-Teijeiro A, Pomeroy SL. Application of microarrays to neurological disease. Arch Neurol, 2003, 60(5): 676-682.
9. Hirschhorn JN, Sklar P, Lindblad-Toh K, et al. SBE-TAGS: an array-based method for efficient single-nucleotide polymorphism genotyping. Proc Natl Acad Sci USA, 2000, 97(22): 12164-12169.
10. Sobrino B, Lareu M, Brion M, et al. SNP genotyping with single base extension-tag microarrays. Int Congr Ser, 2004, 1261(6): 331-333.
11. Steemers FJ, Chang W, Lee G, et al. Whole-genome genotyping with the single-base extension assay. Nat Methods, 2006, 3(1): 31-33.
12. Liu B, Shi XM. Application of internal amplification control in the PCR detection method for food-borne Salmonella. Microbiol, 2006, 33(2): 156-161.
13. Guo X, Chen J, Beuchat LR, et al. PCR detection of Salmonella enterica serotype Montevideo in and on raw tomatoes using primers derived from hilA. Appl Environ Microbiol, 2000, 66(12): 5248-5252.