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Volumn 5724 LNBI, Issue , 2009, Pages 233-245

A general framework for local pairwise alignment statistics with Gaps

Author keywords

[No Author keywords available]

Indexed keywords

EDGE EFFECT; LARGE DATABASE; LOCAL ALIGNMENT; P-VALUES; PAIRWISE ALIGNMENT; POLYNOMIAL-TIME; UPPER BOUND;

EID: 70350358980     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-04241-6_20     Document Type: Conference Paper
Times cited : (2)

References (17)
  • 2
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith, T., Waterman, M.: Identification of common molecular subsequences. J. Mol. Biol. 147, 195-197 (1981)
    • (1981) J. Mol. Biol , vol.147 , pp. 195-197
    • Smith, T.1    Waterman, M.2
  • 5
    • 0025259313 scopus 로고
    • Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes
    • Karlin, S., Altschul, S.F.: Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes. PNAS 87, 2264-2268 (1990)
    • (1990) PNAS , vol.87 , pp. 2264-2268
    • Karlin, S.1    Altschul, S.F.2
  • 6
    • 0020484488 scopus 로고
    • An improved algorithm for matching biological sequences
    • Gotoh, O.: An improved algorithm for matching biological sequences. J. Mol. Biol. 162, 705-708 (1982)
    • (1982) J. Mol. Biol , vol.162 , pp. 705-708
    • Gotoh, O.1
  • 7
    • 0001318108 scopus 로고
    • Statistical composition of high-scoring segments from molecular sequences
    • Karlin, S., Dembo, A., Kawabata, T.: Statistical composition of high-scoring segments from molecular sequences. The Annals of Statistics 18, 571-581 (1990)
    • (1990) The Annals of Statistics , vol.18 , pp. 571-581
    • Karlin, S.1    Dembo, A.2    Kawabata, T.3
  • 8
    • 26444538538 scopus 로고    scopus 로고
    • Statistical signals in bioinformatics
    • Karlin, S.: Statistical signals in bioinformatics. Proc. Natl. Acad. Sci. USA 102, 13355-13362 (2005)
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 13355-13362
    • Karlin, S.1
  • 9
    • 0042600316 scopus 로고    scopus 로고
    • Mercier, S., Cellier, D., Charlot, F., Daudin, J.J.: Exact and asymptotic distribution of the local score of one i.i.d. Random sequence. In: Gascuel, O., Sagot, M.-F. (eds.) JOBIM 2000. LNCS, 2066, pp. 74-83. Springer, Heidelberg (2001)
    • Mercier, S., Cellier, D., Charlot, F., Daudin, J.J.: Exact and asymptotic distribution of the local score of one i.i.d. Random sequence. In: Gascuel, O., Sagot, M.-F. (eds.) JOBIM 2000. LNCS, vol. 2066, pp. 74-83. Springer, Heidelberg (2001)
  • 10
    • 0032512799 scopus 로고    scopus 로고
    • Empirical statistical estimates for sequence similarity searches
    • Pearson, W.: Empirical statistical estimates for sequence similarity searches. J. Mol. Biol. 276, 71-84 (1998)
    • (1998) J. Mol. Biol , vol.276 , pp. 71-84
    • Pearson, W.1
  • 11
    • 33748809505 scopus 로고    scopus 로고
    • Statistical significance in biological sequence analysis
    • Mitrophanov, A., Borodovsky, M.: Statistical significance in biological sequence analysis. Briefings in Bioinformatics 7, 2-24 (2006)
    • (2006) Briefings in Bioinformatics , vol.7 , pp. 2-24
    • Mitrophanov, A.1    Borodovsky, M.2
  • 12
    • 85026778186 scopus 로고    scopus 로고
    • Naor, D., Brutlag, D.: On suboptimal alignments of biological sequences. In: Apos-tolico, A., Crochemore, M., Galil, Z., Manber, U. (eds.) CPM 1993. LNCS, 684, pp. 179-196. Springer, Heidelberg (1993)
    • Naor, D., Brutlag, D.: On suboptimal alignments of biological sequences. In: Apos-tolico, A., Crochemore, M., Galil, Z., Manber, U. (eds.) CPM 1993. LNCS, vol. 684, pp. 179-196. Springer, Heidelberg (1993)
  • 15
    • 84968470212 scopus 로고
    • An algorithm for the machine calculation of complex Fourier series
    • Cooley, J., Tukey, J.: An algorithm for the machine calculation of complex Fourier series. Mathematics of Computation 19, 297-301 (1965)
    • (1965) Mathematics of Computation , vol.19 , pp. 297-301
    • Cooley, J.1    Tukey, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.