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Volumn 5724 LNBI, Issue , 2009, Pages 362-374

MADMX: A novel strategy for maximal dense motif extraction

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL SEQUENCES; BOTTOM-UP FASHION; COMBINING OPERATIONS; DON'T CARE CHARACTER; EXPERIMENTAL EVIDENCE; NEW TOOLS; NOVEL STRATEGIES; TOTAL LENGTH;

EID: 70350350198     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-04241-6_30     Document Type: Conference Paper
Times cited : (9)

References (16)
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    • Agrawal, R., Srikant, R.: Fast algorithms for mining association rules. In: Proc. of 20th VLDB, pp. 487-499 (1994)
    • (1994) Proc. of 20th VLDB , pp. 487-499
    • Agrawal, R.1    Srikant, R.2
  • 4
    • 37249023148 scopus 로고    scopus 로고
    • Optimal offline extraction of irredundant motif bases
    • Lin, G, ed, COCOON 2007, Springer, Heidelberg
    • Apostolico, A., Tagliacollo, C.: Optimal offline extraction of irredundant motif bases. In: Lin, G. (ed.) COCOON 2007. LNCS, vol. 4598, pp. 360-371. Springer, Heidelberg (2007)
    • (2007) LNCS , vol.4598 , pp. 360-371
    • Apostolico, A.1    Tagliacollo, C.2
  • 6
    • 49949090523 scopus 로고    scopus 로고
    • Arimura, H., Uno, T.: Mining maximal flexible patterns in a sequence. In: Satoh, K., Inokuchi, A., Nagao, K., Kawamura, T. (eds.) JSAI 2007. LNCS (LNAI), 4914, pp. 307-317. Springer, Heidelberg (2008)
    • Arimura, H., Uno, T.: Mining maximal flexible patterns in a sequence. In: Satoh, K., Inokuchi, A., Nagao, K., Kawamura, T. (eds.) JSAI 2007. LNCS (LNAI), vol. 4914, pp. 307-317. Springer, Heidelberg (2008)
  • 8
    • 77649236716 scopus 로고    scopus 로고
    • Morris, M., Nicolas, F., Ukkonen, E.: On the complexity of finding gapped motifs. CoRR, abs/0802.0314 (2008)
    • Morris, M., Nicolas, F., Ukkonen, E.: On the complexity of finding gapped motifs. CoRR, abs/0802.0314 (2008)
  • 9
    • 12844259111 scopus 로고    scopus 로고
    • Parida, L.: Some results on flexible-pattern discovery. In: Giancarlo, R., Sankoff, D. (eds.) CPM 2000. LNCS, 1848, pp. 33-45. Springer, Heidelberg (2000)
    • Parida, L.: Some results on flexible-pattern discovery. In: Giancarlo, R., Sankoff, D. (eds.) CPM 2000. LNCS, vol. 1848, pp. 33-45. Springer, Heidelberg (2000)
  • 13
    • 0031684427 scopus 로고    scopus 로고
    • Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm
    • Rigoutsos, I., Floratos, A.: Combinatorial pattern discovery in biological sequences: the TEIRESIAS algorithm. Bioinformatics 14(1), 55-67 (1998)
    • (1998) Bioinformatics , vol.14 , Issue.1 , pp. 55-67
    • Rigoutsos, I.1    Floratos, A.2
  • 14
    • 42449106154 scopus 로고    scopus 로고
    • Empirical comparison of ab initio repeat finding programs
    • Saha, S., Bridges, S., Magbanua, Z.V., Peterson, D.G.: Empirical comparison of ab initio repeat finding programs. Nucleic Acids Res. 36(7), 2284-2294 (2008)
    • (2008) Nucleic Acids Res , vol.36 , Issue.7 , pp. 2284-2294
    • Saha, S.1    Bridges, S.2    Magbanua, Z.V.3    Peterson, D.G.4
  • 15
    • 70350420917 scopus 로고    scopus 로고
    • Smit, A.F.A., Hubley, R., Green, P.: RepeatMasker Open-3.0. 1996-2004, http://www.repeatmasker.org
    • Smit, A.F.A., Hubley, R., Green, P.: RepeatMasker Open-3.0. 1996-2004, http://www.repeatmasker.org
  • 16
    • 38049083794 scopus 로고    scopus 로고
    • Ukkonen, E.: Structural analysis of gapped motifs of a string. In: Kučera, L., Kučera, A. (eds.) MFCS 2007. LNCS, 4708, pp. 681-690. Springer, Heidelberg (2007)
    • Ukkonen, E.: Structural analysis of gapped motifs of a string. In: Kučera, L., Kučera, A. (eds.) MFCS 2007. LNCS, vol. 4708, pp. 681-690. Springer, Heidelberg (2007)


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.