Simple and fast classification of non-LTR retrotransposons based on phylogeny of their RT domain protein sequences

Gene

Volumn 448, Issue 2, 2009, Pages 207-213

  Kapitonov, Vladimir V ^a   Tempel, Sébastien ^a   Jurka, Jerzy ^a  

^a Genetic Information Research Institute   (United States)

Author keywords

Classification; Genome annotation; Non LTR retrotransposons; Phylogenetic analysis; Transposable elements

Indexed keywords

GENOMIC DNA; RNA DIRECTED DNA POLYMERASE;

ACCURACY; AMINO ACID SEQUENCE; ARTICLE; CLADISTICS; CLASSIFICATION ALGORITHM; COMPUTER PROGRAM; DNA SEQUENCE; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; RELIABILITY; RETROPOSON; SEQUENCE ALIGNMENT;

ALGORITHMS; AMINO ACID SEQUENCE; CLASSIFICATION; MODELS, GENETIC; PHYLOGENY; PROTEIN STRUCTURE, TERTIARY; REPRODUCIBILITY OF RESULTS; RETROELEMENTS; RNA-DIRECTED DNA POLYMERASE; SEQUENCE ANALYSIS, DNA; TERMINAL REPEAT SEQUENCES;

EID: 70350244686     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2009.07.019     Document Type: Article

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