메뉴 건너뛰기




Volumn 9, Issue 7, 2009, Pages 645-650

Helicase-dependent amplification: Use in OnChip amplification and potential for point-of-care diagnostics

Author keywords

DNA microarray; Helicase dependent amplification; Multiplex detection; OnChip amplification; Point of care

Indexed keywords

DOUBLE STRANDED DNA; HELICASE;

EID: 70350055474     PISSN: 14737159     EISSN: 17448352     Source Type: Journal    
DOI: 10.1586/erm.09.46     Document Type: Review
Times cited : (29)

References (35)
  • 1
    • 33645844551 scopus 로고    scopus 로고
    • PCR microfluidic devices for DNA amplification
    • Zhang C, Xu J, Ma W, Zheng W. PCR microfluidic devices for DNA amplification. Biotechnol. Adv. 24(3), 243-284 (2006).
    • (2006) Biotechnol. Adv. , vol.24 , Issue.3 , pp. 243-284
    • Zhang, C.1    Xu, J.2    Ma, W.3    Zheng, W.4
  • 2
    • 34547839765 scopus 로고    scopus 로고
    • Miniaturized PCR chips for nucleic acid amplification and analysis: Latest advances and future trends
    • •• Comprehensive review of current PCR 'Lab on Chip' developments
    • Zhang C, Xing D. Miniaturized PCR chips for nucleic acid amplification and analysis: latest advances and future trends. Nucleic Acids Res. 35(13), 4223-4237 (2007). •• Comprehensive review of current PCR 'Lab on Chip' developments.
    • (2007) Nucleic Acids Res. , vol.35 , Issue.13 , pp. 4223-4237
    • Zhang, C.1    Xing, D.2
  • 3
    • 64849101995 scopus 로고    scopus 로고
    • Helicase-dependent OnChip-amplification and its use in multiplex pathogen detection
    • •• First publication on OnChip-helicasedependent amplification (HDA)
    • Andresen D, von Nickisch-Rosenegk M, Bier FF. Helicase-dependent OnChip-amplification and its use in multiplex pathogen detection. Clin. Chim. Acta 403(1-2), 244-248 (2009). •• First publication on OnChip-helicasedependent amplification (HDA).
    • (2009) Clin. Chim. Acta , vol.403 , Issue.1-2 , pp. 244-248
    • Andresen, D.1    Von Nickisch-Rosenegk, M.2    Bier, F.F.3
  • 4
    • 4444258850 scopus 로고    scopus 로고
    • Helicase-dependent isothermal DNA amplification
    • •• First publication on HDA
    • Vincent M, Xu Y, Kong H. Helicase-dependent isothermal DNA amplification. EMBO Rep. 5(8), 795-800 (2004). •• First publication on HDA.
    • (2004) EMBO Rep. , vol.5 , Issue.8 , pp. 795-800
    • Vincent, M.1    Xu, Y.2    Kong, H.3
  • 5
    • 23844480384 scopus 로고    scopus 로고
    • Characterization of a thermostable UvrD helicase and its participation in helicase-dependent amplification
    • • Comprehensive description of 'second-generation' HDA
    • An L, Tang W, Ranalli TA et al. Characterization of a thermostable UvrD helicase and its participation in helicase-dependent amplification. J. Biol. Chem. 280(32), 28952-28958 (2005). • Comprehensive description of 'second-generation' HDA.
    • (2005) J. Biol. Chem. , vol.280 , Issue.32 , pp. 28952-28958
    • An, L.1    Tang, W.2    Ranalli, T.A.3
  • 6
    • 36349008652 scopus 로고    scopus 로고
    • Development of a novel one-tube isothermal reverse transcription thermophilic helicase-dependent amplification platform for rapid RNA detection
    • DOI 10.2353/jmoldx.2007.070012
    • Goldmeyer J, Kong H, Tang W. Development of a novel one-tube isothermal reverse transcription thermophilic helicase-dependent amplification platform for rapid RNA detection. J. Mol. Diagn. 9(5), 639-644 (2007). (Pubitemid 350158424)
    • (2007) Journal of Molecular Diagnostics , vol.9 , Issue.5 , pp. 639-644
    • Goldmeyer, J.1    Kong, H.2    Tang, W.3
  • 7
    • 42449117207 scopus 로고    scopus 로고
    • Identification of Staphylococcus aureus and determination of methicillin resistance directly from positive blood cultures by isothermal amplification and a disposable detection device
    • DOI 10.1128/JCM.02234-07
    • Goldmeyer J, Li H, McCormac M et al. Identification of Staphylococcus aureus and determination of methicillin resistance directly from positive blood cultures by isothermal amplification and a disposable detection device. J. Clin. Microbiol. 46(4), 1534-1536 (2008). (Pubitemid 351563611)
    • (2008) Journal of Clinical Microbiology , vol.46 , Issue.4 , pp. 1534-1536
    • Goldmeyer, J.1    Li, H.2    McCormac, M.3    Cook, S.4    Stratton, C.5    Lemieux, B.6    Kong, H.7    Tang, W.8    Tang, Y.-W.9
  • 8
    • 57349156882 scopus 로고    scopus 로고
    • Development of isothermal TaqMan assays for detection of biothreat organisms
    • • First publication on TaqMan HDA
    • Tong Y, Tang W, Kim HJ et al. Development of isothermal TaqMan assays for detection of biothreat organisms. Biotechniques 45(5), 543-557 (2008). • First publication on TaqMan HDA.
    • (2008) Biotechniques , vol.45 , Issue.5 , pp. 543-557
    • Tong, Y.1    Tang, W.2    Kim, H.J.3
  • 9
    • 46149109002 scopus 로고    scopus 로고
    • Enhancing helicase-dependent amplification by fusing the helicase with the DNA polymerase
    • Motre A, Li Y, Kong H. Enhancing helicase-dependent amplification by fusing the helicase with the DNA polymerase. Gene 420(1), 17-22 (2008).
    • (2008) Gene , vol.420 , Issue.1 , pp. 17-22
    • Motre, A.1    Li, Y.2    Kong, H.3
  • 10
    • 33746408205 scopus 로고    scopus 로고
    • Diagnostic applications of microarrays
    • Petrik J. Diagnostic applications of microarrays. Transfus. Med. 16(4), 233-247 (2006).
    • (2006) Transfus. Med. , vol.16 , Issue.4 , pp. 233-247
    • Petrik, J.1
  • 11
    • 14344249532 scopus 로고    scopus 로고
    • Diagnostic and analytical applications of protein microarrays
    • DOI 10.1586/14789450.2.1.41
    • Dufva M, Christensen C. Diagnostic and analytical applications of protein microarrays. Expert Rev. Proteomics 2(1), 41-48 (2005). (Pubitemid 40292578)
    • (2005) Expert Review of Proteomics , vol.2 , Issue.1 , pp. 41-48
    • Dufva, M.1    Christensen, C.B.V.2
  • 13
    • 57749171178 scopus 로고    scopus 로고
    • Applications of microarrays in pathogen detection and biodefence
    • • Recent microarray applications in biodefense
    • Uttamchandani M, Neo JL, Ong BN, Moochhala S. Applications of microarrays in pathogen detection and biodefence. Trends Biotechnol. 27(1), 53-61 (2008). • Recent microarray applications in biodefense.
    • (2008) Trends Biotechnol. , vol.27 , Issue.1 , pp. 53-61
    • Uttamchandani, M.1    Neo, J.L.2    Ong, B.N.3    Moochhala, S.4
  • 14
    • 28544435896 scopus 로고    scopus 로고
    • Highly parallel microbial diagnostics using oligonucleotide microarrays
    • DOI 10.1016/j.cccn.2005.05.041, PII S0009898105004298
    • Loy A, Bodrossy L. Highly parallel microbial diagnostics using oligonucleotide microarrays. Clin. Chim. Acta 363(1-2), 106-119 (2006). (Pubitemid 41745228)
    • (2006) Clinica Chimica Acta , vol.363 , Issue.1-2 , pp. 106-119
    • Loy, A.1    Bodrossy, L.2
  • 15
    • 2942527326 scopus 로고    scopus 로고
    • Oligonucleotide microarrays in microbial diagnostics
    • Bodrossy L, Sessitsch A. Oligonucleotide microarrays in microbial diagnostics. Curr. Opin. Microbiol. 7(3), 245-254 (2004).
    • (2004) Curr. Opin. Microbiol. , vol.7 , Issue.3 , pp. 245-254
    • Bodrossy, L.1    Sessitsch, A.2
  • 16
    • 28544431609 scopus 로고    scopus 로고
    • Amplification of circularizable probes for the detection of target nucleic acids and proteins
    • DOI 10.1016/j.cccn.2005.05.039, PII S0009898105004250
    • Zhang D, Wu J, Ye F et al. Amplification of circularizable probes for the detection of target nucleic acids and proteins. Clin. Chim. Acta. 363(1-2), 61-70 (2006). (Pubitemid 41745225)
    • (2006) Clinica Chimica Acta , vol.363 , Issue.1-2 , pp. 61-70
    • Zhang, D.1    Wu, J.2    Ye, F.3    Feng, T.4    Lee, I.5    Yin, B.6
  • 17
    • 0035656265 scopus 로고    scopus 로고
    • Signal amplification by rolling circle amplification on DNA microarrays
    • Nallur G, Luo C, Fang L et al. Signal amplification by rolling circle amplification on DNA microarrays. Nucleic Acid Res. 29(23), E118 (2001).
    • (2001) Nucleic Acid Res. , vol.29 , Issue.23
    • Nallur, G.1    Luo, C.2    Fang, L.3
  • 18
    • 0033053150 scopus 로고    scopus 로고
    • Rolling circle amplification of DNA immobilized on solid surfaces and its application to multiplex mutation detection
    • DOI 10.1016/S1050-3862(98)00014-X, PII S105038629800014X
    • Hatch A, Sano T, Misasi J, Smith CL. Rolling circle amplification of DNA immobilized on solid surfaces and its application to multiplex mutation detection. Genet. Anal. 15(2), 35-40 (1999). (Pubitemid 29135360)
    • (1999) Genetic Analysis - Biomolecular Engineering , vol.15 , Issue.2 , pp. 35-40
    • Hatch, A.1    Sano, T.2    Misasi, J.3    Smith, C.L.4
  • 19
    • 0033951040 scopus 로고    scopus 로고
    • Anchored multiplex amplification on a microelectronic chip array
    • DOI 10.1038/72658
    • Westin L, Xu X, Miller C et al. Anchored multiplex amplification on a microelectronic chip array. Nat. Biotechnol. 18(19), 99-204 (2000). • Strand displacement amplification on a solid phase. (Pubitemid 30091182)
    • (2000) Nature Biotechnology , vol.18 , Issue.2 , pp. 199-204
    • Westin, L.1    Xu, X.2    Miller, C.3    Wang, L.4    Edman, C.F.5    Nerenberg, M.6
  • 20
    • 0034667196 scopus 로고    scopus 로고
    • Solid phase DNA amplification: Characterisation of primer attachment and amplification mechanisms
    • •• First publication on solid phase DNA amplification on a microarray
    • Adessi C, Matton G, Ayala G et al. Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms. Nucleic Acids Res. 28(20), E87 (2000). •• First publication on solid phase DNA amplification on a microarray.
    • (2000) Nucleic Acids Res. , vol.28 , Issue.20
    • Adessi, C.1    Matton, G.2    Ayala, G.3
  • 21
    • 33750595472 scopus 로고    scopus 로고
    • Microarray-based detection of bacteria by on-chip PCR
    • Mitterer G, Schmidt W. Microarray-based detection of bacteria by on-chip PCR. Methods Mol. Biol. 34537-34551 (2006).
    • (2006) Methods Mol. Biol. , pp. 34537-34551
    • Mitterer, G.1    Schmidt, W.2
  • 22
    • 11144226239 scopus 로고    scopus 로고
    • On-chip PCR amplification of very long templates using immobilized primers on glassy surfaces
    • DOI 10.1016/j.bios.2004.07.007, PII S0956566304003136
    • von Nickisch-Rosenegk M, Marschan X, Andresen D et al. On-chip PCR amplification of very long templates using immobilized primers on glassy surfaces. Biosens. Bioelectron. 20(8), 1491-1498 (2005). (Pubitemid 40051236)
    • (2005) Biosensors and Bioelectronics , vol.20 , Issue.8 SPEC. ISS , pp. 1491-1498
    • Nickisch-Rosenegk, M.V.1    Marschan, X.2    Andresen, D.3    Abraham, A.4    Heise, C.5    Bier, F.F.6
  • 23
    • 1542723586 scopus 로고    scopus 로고
    • Microarray-Based Identification of Bacteria in Clinical Samples by Solid-Phase PCR Amplification of 23S Ribosomal DNA Sequences
    • DOI 10.1128/JCM.42.3.1048-1057.2004
    • Mitterer G, Huber M, Leidinger E et al. Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences. J. Clin. Microbiol. 42(3), 1048-1057 (2004). (Pubitemid 38332824)
    • (2004) Journal of Clinical Microbiology , vol.42 , Issue.3 , pp. 1048-1057
    • Mitterer, G.1    Huber, M.2    Leidinger, E.3    Kirisits, C.4    Lubitz, W.5    Mueller, M.W.6    Schmidt, W.M.7
  • 24
    • 0036535486 scopus 로고    scopus 로고
    • Accessing single nucleotide polymorphisms in genomic DNA by direct multiplex polymerase chain reaction amplification on oligonucleotide microarrays
    • DOI 10.1006/abio.2001.5565
    • Huber M, Mündlein A, Dornstauder E et al. Accessing single nucleotide polymorphisms in genomic DNA by direct multiplex polymerase chain reaction amplification on oligonucleotide microarrays. Anal. Biochem. 303(1), 25-33 (2002). (Pubitemid 34271101)
    • (2002) Analytical Biochemistry , vol.303 , Issue.1 , pp. 25-33
    • Huber, M.1    Mundlein, A.2    Dornstauder, E.3    Schneeberger, C.4    Tempfer, C.B.5    Mueller, M.W.6    Schmidt, W.M.7
  • 25
    • 0035577335 scopus 로고    scopus 로고
    • Detection of single base alterations in genomic DNA by solid phase polymerase chain reaction on oligonucleotide microarrays
    • DOI 10.1006/abio.2001.5355
    • Huber M, Losert D, Hiller R et al. Detection of single base alterations in genomic DNA by solid phase polymerase chain reaction on oligonucleotide microarrays. Anal. Biochem. 299(1), 24-30 (2001). (Pubitemid 33124123)
    • (2001) Analytical Biochemistry , vol.299 , Issue.1 , pp. 24-30
    • Huber, M.1    Losert, D.2    Hiller, R.3    Harwanegg, C.4    Mueller, M.W.5    Schmidt, W.M.6
  • 26
    • 0035337810 scopus 로고    scopus 로고
    • Integration of multiple PCR amplifications and DNA
    • Tillib SV, Strizhkov BN, Mirzabekov AD. Integration of multiple PCR amplifications and DNA. Anal. Biochem. 292(1), 155-160 (2001).
    • (2001) Anal. Biochem. , vol.292 , Issue.1 , pp. 155-160
    • Tillib, S.V.1    Strizhkov, B.N.2    Mirzabekov, A.D.3
  • 27
    • 20844433527 scopus 로고    scopus 로고
    • In vitro transcription of a whole gene on a surface-coupled template
    • Khodakov DA, Zakharova NV, Gryadunov DA et al. In vitro transcription of a whole gene on a surface-coupled template. Lab. Chip 5(6), 665-668 (2005).
    • (2005) Lab. Chip , vol.5 , Issue.6 , pp. 665-668
    • Khodakov, D.A.1    Zakharova, N.V.2    Gryadunov, D.A.3
  • 29
    • 45849103493 scopus 로고    scopus 로고
    • Reverse transcription-polymerase chain reaction on a microarray: The integrating concept of "active arrays"
    • Nickisch-Rosenegk MV, Marschan X, Andresen D, Bier F. Reverse transcription-polymerase chain reaction on a microarray: the integrating concept of "active arrays". Anal. Bioanal. Chem. 391(5), 1671-1678 (2008).
    • (2008) Anal. Bioanal. Chem. , vol.391 , Issue.5 , pp. 1671-1678
    • Nickisch-Rosenegk, M.V.1    Marschan, X.2    Andresen, D.3    Bier, F.4
  • 35
    • 69949145215 scopus 로고    scopus 로고
    • Marktpotenzial von point-of-care-testing/market potential of point-of-care testing
    • Ehrentreich-Förster E, Andresen D. Marktpotenzial von point-of-care-testing/market potential of point-of-care testing. LaboratoriumsMedizin 33(3), 153-157 (2009).
    • (2009) LaboratoriumsMedizin , vol.33 , Issue.3 , pp. 153-157
    • Ehrentreich-Förster, E.1    Andresen, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.