Patterns of colonization and spread in the fungal spruce pathogen Onnia tomentosa

Molecular Ecology

Volumn 18, Issue 21, 2009, Pages 4422-4433

  Germain, H ^a   Bergeron, M J ^b   Bernier, L ^c   Laflamme, G ^b   Hamelin, R C ^b,d  

^a LAURENTIAN FORESTRY CENTRE   (Canada)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^c UNIVERSITÉ LAVAL   (Canada)

^d UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

Buller phenomenon; Genetic structure; Onnia tomentosa; Root rot; Wahlund effect

Indexed keywords

FUNGAL DNA; MITOCHONDRIAL DNA;

ALLELE; ARTICLE; BASIDIOMYCETES; CANADA; CELL NUCLEUS; DNA SEQUENCE; GENE FREQUENCY; GENETIC MARKER; GENETICS; GROWTH, DEVELOPMENT AND AGING; MICROBIOLOGY; PLANT DISEASE; POPULATION GENETICS; SINGLE STRAND CONFORMATION POLYMORPHISM; SPRUCE; TREE;

ALLELES; BASIDIOMYCOTA; CELL NUCLEUS; DNA, FUNGAL; DNA, MITOCHONDRIAL; GENE FREQUENCY; GENETIC MARKERS; GENETICS, POPULATION; PICEA; PLANT DISEASES; POLYMORPHISM, SINGLE-STRANDED CONFORMATIONAL; QUEBEC; SEQUENCE ANALYSIS, DNA; TREES;

FUNGI; ONNIA TOMENTOSA; PICEA; PICEA GLAUCA;

EID: 70350047055     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2009.04370.x     Document Type: Article

References (40)

1. Bae H, Hansen EM, Strauss SH (1994) Restriction fragment length polymorphisms demonstrate single origin of infection centers in Phellinus weirii. Canadian Journal of Botany, 72, 440 447.
2. Baruffi L, Damiani G, Guglielmino CR et al. (1995) Polymorphism within and between populations of Ceratitis capitata: comparison between RAPD and multilocus enzyme electrophoresis data. Heredity, 74, 425 437.
3. Bendel M, Kienast F, Rigling D (2006) Genetic population structure of three Armillaria species at the landscape scale: a case study from Swiss Pinus mugo forests. Mycological Research, 110, 705 712.
4. Bergemann SE, Miller SL (2002) Size, distribution, and persistence of genets in local populations of the late-stage ectomycorrhizal basidiomycete, Russula brevipes. New Phytologist, 156, 313 320.
5. Bottema CDK, Sarkar G, Cassady JD et al. (1993) Polymerase chain reaction amplification of specific alleles: a general method of detection of mutations, polymorphisms, and haplotypes. Methods in Enzymology, 218, 388 402.
6. Buller AHR (1931) Researches on fungi, vol. IV. Longmans, Green and Co., London, UK.
7. Carvalho DB, Smith ML, Anderson JB (1995) Genetic exchange between diploid and haploid mycelia of Armillaria gallica. Mycological Research, 99, 641 647.
8. Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657 1659.
9. Coetzee MPA, Wingfield BD, Harrington TC et al. (2001) The root rot fungus Armillaria mellea introduced into South Africa by early Dutch settlers. Molecular Ecology, 10, 387 396.
10. Dettman JR, van der Kamp BJ (2001a) The population structure of Armillaria ostoyae and Armillaria sinapina in the central interior of British Columbia. Canadian Journal of Botany, 79, 600 611.
11. Dettman JR, van der Kamp BJ (2001b) The population structure of Armillaria ostoyae in the southern interior of British Columbia. Canadian Journal of Botany, 79, 612 620.
12. Dunham SM, Kretzer A, Pfrender ME (2003) Characterization of Pacific golden chanterelle (Cantharellus formosus) genet size using co-dominant microsatellite markers. Molecular Ecology, 12, 1607 1618.
13. Ferguson BA, Dreisbach TA, Parks CG, Filip GM, Schmitt CL (2003) Coarse-scale population structure of pathogenic Armillaria species in a mixed-conifer forest in the Blue Mountains of northeast Oregon. Canadian Journal of Forest Research, 33, 612 623.
14. Fiore-Donno AM, Martin F (2001) Populations of ectomycorrhizal Laccaria amethystina and Xerocomus spp. show contrasting colonization patterns in a mixed forest. New Phytologist, 152, 533 542.
15. Garbelotto M, Cobb FW, Bruns TD et al. (1999) Genetic structure of Heterobasidion annosum in white fir mortality centers in California. Phytopathology, 89, 546 554.
16. Germain H, Laflamme G, Bernier L, Boulet B, Hamelin RC (2002) DNA polymorphism and molecular diagnosis in Inonotus spp. Canadian Journal of Plant Pathology, 24, 194 199.
17. Gherbi H, Delaruelle C, Selosse MA, Martin F (1999) High genetic diversity in a population of the ectomycorrhizal basidiomycete Laccaria amethystina in a 150-year-old beech forest. Molecular Ecology, 8, 2003 2013.
18. Glass NL, Donaldson GC (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and Environmental Microbiology, 61, 1323 1330.
19. Hamelin RC, Allaire M, Bergeron MJ, Nicole MC, Lecours N (2005) Molecular epidemiology of white pine blister rust: recombination and spatial distribution. Phytopathology, 95, 793 799.
20. Holmer L, Nitare L, Stenlid J (1994) Population structure and decay pattern of Phellinus tremulae in Populus tremula as determined by somatic incompatibility. Canadian Journal of Botany, 72, 1391 1396.
21. Hunt RS, Peet FG (1997) Annual spread rate of tomentosus root disease. Plant Disease, 81, 1053 1056.
22. Hunt RS, Unger LS (1994) Tomentosus root disease. In : Forest Pest Leaflet 77 (ed. Natural Resources Canada, CFS). Pacific Forestry Centre, Victoria, BC. Co-published by the BC Ministry of Forests, 8 pp.
23. Kretzer AM, Dunham S, Molina R, Spatafora JW (2004) Microsatellite markers reveal the below ground distribution of genets in two species of Rhizopogon forming tuberculate ectomycorrhizas on Douglas fir. New Phytologist, 161, 313 320.
24. Lewis KJ (1997) Growth reduction in spruce infected by Inonotus tomentosus in central British Columbia. Canadian Journal of Forest Research, 27, 1669 1674.
25. Lewis KJ, Hansen EM (1991a) Survival of Inonotus tomentosus in stumps and subsequent infection of young stands in north central British Columbia. Canadian Journal of Forest Research, 21, 1049 1057.
26. Lewis KJ, Hansen EM (1991b) Vegetative compatibility groups and protein electrophoresis indicate a role for basidiospores in spread of Inonotus tomentosus in spruce forests of British Columbia. Canadian Journal of Botany, 69, 1756 1763.
27. Lewis KJ, Morrison DJ, Hansen EM (1992) Spread of Inonotus tomentosus from infection centres in spruce forests in British Columbia. Canadian Journal of Forest Research, 22, 68 72.
28. Peakall R, Smouse PE (2006) genalex 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes, 6, 288 295.
29. Pedgley DE (1986) Long distance transport of spores. In : Plant Disease Epidemiology: Population Dynamics and Management (eds Leonard KJ, Fry WE pp. 346 365. Macmillan, New York.
30. Raymond M, Rousset F (1995) GENEPOP (Version 1.2): Population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248 249.
31. Redecker D, Szaro TM, Bowman RJ, Bruns TD (2001) Small genets of Lactarius xanthogalactus, Russula cremoricolor and Amanita francheti in late-stage ectomycorrhizal successions. Molecular Ecology, 10, 1025 1034.
32. Rizzo DM, Blanchette RA, May G (1995) Distribution of Armillaria ostoyae genets in a Pinus resinosa-Pinus banksiana forest. Canadian Journal of Botany, 73, 776 787.
33. Rozas J, Rozas R (1999) DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics, 15, 174 175.
34. Smith ML, Bruhn JN, Anderson JB (1992) The fungus Armillaria bulbosa is among the largest and oldest living organisms. Nature, 356, 428 431.
35. Tkacz BM, Baker FA (1991) Survival of Inonotus tomentosus in spruce stumps after logging. Plant Disease, 75, 788 790.
36. Vasiliauskas R, Stenlid J (1998) Spread of S and P group isolates of Heterobasidion annosum within and among Picea abies trees in central Lithuania. Canadian Journal of Forest Research, 28, 961 966.
37. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In : PCR protocols: A guide to methods and applications (ed. Innis M pp. 315 322. Academic Press, San Diego.
38. Whitney RD (1962) Studies in forest pathology: XXIV. Polyporus tomentosus Fr. as a major factor in stand-opening disease in white spruce. Canadian Journal of Botany, 40, 1631 1658.
39. Whitney RD (1995) Root-rotting fungi in white spruce, black spruce, and balsam fir in northern Ontario. Canadian Journal of Forest Research, 25, 1209 1230.
40. Whitney RD, Fleming RA (2005) Quantifying relationships between root rot in a white spruce plantation and sporophores of Inonotus tomentosus. Forest Pathology, 35, 75 84.