Enzymatic digestion of single DNA molecules anchored on nanogold-modified surfaces

Nanoscale Research Letters

Volumn 4, Issue 9, 2009, Pages 1029-1034

  Lü, Junhong ^a   Ye, Ming ^a   Duan, Na ^a   Li, Bin ^a  

^a SHANGHAI INSTITUTE OF APPLIED PHYSICS   (China)

Author keywords

Atomic force microscopy; Dip Pen Nanolithography; DNA; Gold nanoparticles; Mica

Indexed keywords

BIOLOGICAL PROPERTIES; DIP-PEN NANOLITHOGRAPHY; DNA MOLECULES; ELECTROSTATIC INTERACTIONS; ENZYMATIC DIGESTIONS; ENZYME-DNA INTERACTIONS; GOLD NANOPARTICLES; MICA SURFACES; MODIFIED SURFACES; MOLECULAR LEVELS; NANO-GOLD; SINGLE DNA MOLECULES; STRUCTURAL INFORMATION;

ATOMIC FORCE MICROSCOPY; GENES; MICA; MOLECULES; NANOLITHOGRAPHY; NANOPARTICLES; NUCLEIC ACIDS; SILICATE MINERALS; SURFACE TOPOGRAPHY;

DNA;

EID: 70349986486     PISSN: 19317573     EISSN: 1556276X     Source Type: Journal    
DOI: 10.1007/s11671-009-9350-6     Document Type: Article

References (23)

1. M.-L. Visnapuu, D. Duzdevich, E.C. Greene, Mol. Biosyst. 4, 394 (2008). doi:10.1039/b800444g.
2. E. Rhoades, E. Gussakoysky, G. Haran, Proc. Natl Acad. Sci. USA 100, 3197-3202 (2003). doi:10.1073/pnas.2628068100.
3. A.M. van Oijen, P.C. Blainey, D.J. Crampton, C.C. Richardson, T. Ellenberger, X.S. Xie, Science 301, 1235 (2003). doi:10.1126/science.1084387.
4. H.G. Hansma, D.E. Laney, Biophys. J. 70, 1933 (1996). doi:10.1016/S0006-3495(96)79757-6.
5. M. Bussiek, K. Toth, N. Muecke, N. Brun, J. Langowski, Biophys. J. 88, 58a (2005).
6. S.J.T. van Noort, O.H. Willemsen, K.O. van der Werf, B.G. de Grooth, J. Greve, Langmuir 15, 7101 (1999). doi:10.1021/la990459a.
7. Y.L. Lyubchenko, A.A. Gall, L.S. Shlyakhtenko, R.E. Harrington, B.L. Jacobs, P.I. Oden, S.M. Lindsay, J. Biomol. Struct. Dyn. 10, 589 (1992).
8. M. Sasou, S. Sugiyama, T. Yoshino, T. Ohtani, Langmuir 19, 9845 (2003). doi:10.1021/la035054b.
9. T. Thundat, D.P. Allison, R.J. Warmack, G.M. Brown, K.B. Jacobson, J.J. Schrick, T.L. Ferrell, Scanning Microsc. 6, 911 (1992).
10. T.F. Chan, C. Ha, A. Phong, D. Cai, E. Wan, L. Leung, P.Y. Kwok, M. Xiao, Nucleic Acids Res. 34, e113 (2006). doi:10.1093/nar/gkl593.
11. S. Matsuura, J. Komatsu, K. Hirano, H. Yasuda, K. Takashima, S. Katsura, A. Mizuno, Nucleic Acids Res. 29, e79 (2001). doi:10.1093/nar/29.16.e79.
12. J.H. Kim, R.G. Larson, Nucleic Acids Res. 35, 3848 (2007). doi:10.1093/nar/gkm332.
13. A. Crut, B. Geron-Landre, I. Bonnet, S. Bonneau, P. Desbiolles, C. Escude, Nucleic Acids Res. 33, e98 (2005). doi:10.1093/nar/gni097.
14. O. Medalia, J. Englander, R. Guckenberger, J. Sperling, Ultramicroscopy 90, 103 (2002). doi:10.1016/S0304-3991(01)00141-3.
15. V.R. Dukkipati, J.H. Kim, S.W. Pang, R.G. Larson, Nano Lett. 6, 2499 (2006). doi:10.1021/nl0617484.
16. B. Li, Y. Zhang, S.H. Yan, J.H. Lu, M. Ye, M.Q. Li, J. Hu, J. Am. Chem. Soc. 129, 6668 (2007). doi:10.1021/ja0687015.
17. H. Yokota, J. Sunwoo, M. Sarikaya, G. van den Engh, R. Aebersold, Anal. Chem. 71, 4418 (1999). doi:10.1021/ac9902695.
18. R.D. Piner, J. Zhu, F. Xu, S.H. Hong, C.A. Mirkin, Science 283, 661 (1999). doi:10.1126/science.283.5402.661.
19. B. Li, Y. Zhang, J. Hu, M.Q. Li, Ultramicroscopy 105, 312 (2005). doi:10.1016/j.ultramic.2005.06.056.
20. J. Hyun, J. Kim, S.L. Craig, A. Chilkoti, J. Am. Chem. Soc. 126, 4770-4771 (2004). doi:10.1021/ja049956q.
21. J.F. Hainfeld, R.D. Powell, J. Histochem. Cytochem. 48, 471 (2000).
22. Z. Gueroui, C. Place, E. Freyssingeas, B. Berge, Proc. Natl Acad. Sci. USA 99, 6005 (2002). doi:10.1073/pnas.092561399.
23. O. Pietrement, D. Pastre, F. Landousy, M.O. David, S. Fusil, L. Hamon, A. Zozime, E. Le Cam, Eur. Biophys. J. 34, 200 (2005). doi:10.1007/s00249-004-0443-y.