-
1
-
-
0034735782
-
Bacterial dehalorespiration with chlorinated benzenes
-
Adrian, L., U. Szewzyk, J. Wecke, and H. Görisch. 2000. Bacterial dehalorespiration with chlorinated benzenes. Nature 408:580-583.
-
(2000)
Nature
, vol.408
, pp. 580-583
-
-
Adrian, L.1
Szewzyk, U.2
Wecke, J.3
Görisch, H.4
-
2
-
-
33847631292
-
Functional bacterial and archaeal community structures of majar trophic groups in a full-scale anaerobic sludge digester
-
Ariesyady, H.D., T. Ito, and S. Okabe. 2007. Functional bacterial and archaeal community structures of majar trophic groups in a full-scale anaerobic sludge digester. Water Res. 41:1554-1568.
-
(2007)
Water Res.
, vol.41
, pp. 1554-1568
-
-
Ariesyady, H.D.1
Ito, T.2
Okabe, S.3
-
3
-
-
70349909524
-
Analysis of bacterial community diversity in anaerobic fluidized bed bioreactors treating 2,4-dinitroanisole (DNAN) and n-methyl-4-nitroaniline (MNA) using 16S rRNA gene clone libraries
-
Arnett, C.M., G. Rodriguez, and S.W. Maloney. 2009. Analysis of bacterial community diversity in anaerobic fluidized bed bioreactors treating 2,4-dinitroanisole (DNAN) and n-methyl-4-nitroaniline (MNA) using 16S rRNA gene clone libraries. Microbes Environ. 24:72-75.
-
(2009)
Microbes Environ.
, vol.24
, pp. 72-75
-
-
Arnett, C.M.1
Rodriguez, G.2
Maloney, S.W.3
-
4
-
-
34250868973
-
Diversity and function Chloroflexus-like bacteria in a hypersaline microbial mat: Phylogenetic characterization and impact on aerobic respiration
-
Bachar, A., E. Omoregie, R.D. Wit, and H.M. Jonkers. 2007. Diversity and function Chloroflexus-like bacteria in a hypersaline microbial mat: Phylogenetic characterization and impact on aerobic respiration. Appl. Environ. Microbiol. 73:3975-3983.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 3975-3983
-
-
Bachar, A.1
Omoregie, E.2
Wit, R.D.3
Jonkers, H.M.4
-
5
-
-
34547149519
-
Source tracking aerosols released from land-applied class B biosolids during high-wind events
-
Baertsch, C., T. Paez-Rubio, E. Viau, and J. Peccia. 2007. Source tracking aerosols released from land-applied class B biosolids during high-wind events. Appl. Environ. Microbiol. 73:4522-11531
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 4522-11531
-
-
Baertsch, C.1
Paez-Rubio, T.2
Viau, E.3
Peccia, J.4
-
6
-
-
0036151745
-
Phylogenetic composition of bacterioplankton assemblages from the Arctic Ocean
-
Bano, N., and J.T. Hollibaugh. 2002. Phylogenetic composition of bacterioplankton assemblages from the Arctic Ocean. Appl. Environ. Microbiol. 68:505-518.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 505-518
-
-
Bano, N.1
Hollibaugh, J.T.2
-
7
-
-
48749117805
-
Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment
-
Biddle, J.F., S. Fitz-Gibbon, S.C. Schuster, J.E. Brenchley, and C.H. House. 2008. Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment. Proc. Natl. Acad. Sci. USA 105:10583-10588.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 10583-10588
-
-
Biddle, J.F.1
Fitz-Gibbon, S.2
Schuster, S.C.3
Brenchley, J.E.4
House, C.H.5
-
8
-
-
0036667419
-
Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal
-
Björnsson, L., P. Hugenholtz, G.W. Tyson, and L.L. Blackall. 2002. Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal. Microbiology 148:2309-2318.
-
(2002)
Microbiology
, vol.148
, pp. 2309-2318
-
-
Björnsson, L.1
Hugenholtz, P.2
Tyson, G.W.3
Blackall, L.L.4
-
9
-
-
1842637864
-
Thermobaculum terrenum gen. nov., sp nov.: A non-phototrophic gram-positive thermophile representing an environmental clone group related to the Chloroflexi (green non-sulfur bacteria) and Thermomicrobia
-
Botero, L.M., K.B. Brown, S. Brumefield, M. Burr, R.W. Castenholz, M. Young, and T.R. McDermott. 2004. Thermobaculum terrenum gen. nov., sp nov.: A non-phototrophic gram-positive thermophile representing an environmental clone group related to the Chloroflexi (green non-sulfur bacteria) and Thermomicrobia. Arch. Microbiol. 181:269-277.
-
(2004)
Arch. Microbiol.
, vol.181
, pp. 269-277
-
-
Botero, L.M.1
Brown, K.B.2
Brumefield, S.3
Burr, M.4
Castenholz, R.W.5
Young, M.6
McDermott, T.R.7
-
10
-
-
57049171854
-
New tools for discovering and characterizing microbial diversity
-
Cardenas, E., and J.M. Tiedje. 2008. New tools for discovering and characterizing microbial diversity. Curr. Opin. Biotechnol. 19:544-549.
-
(2008)
Curr. Opin. Biotechnol.
, vol.19
, pp. 544-549
-
-
Cardenas, E.1
Tiedje, J.M.2
-
11
-
-
33745131059
-
New lineage of filamentous, spore- forming, gram-positive bacteria from soil
-
Cavaletti, L., P. Monciardini, R. Bamonte, P. Schumann, M. Rohde, M. Sosio, and S. Donadio. 2006. New lineage of filamentous, spore- forming, gram-positive bacteria from soil. Appl. Environ. Microbiol. 72:4360-4369.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 4360-4369
-
-
Cavaletti, L.1
Monciardini, P.2
Bamonte, R.3
Schumann, P.4
Rohde, M.5
Sosio, M.6
Donadio, S.7
-
12
-
-
22744444875
-
Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester
-
Chouari, R., D.L. Paslier, P. Daegelen, P. Ginestet, J. Weissenbach, and A. Sghir. 2005. Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester. Environ. Microbiol. 7:1104-1115.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 1104-1115
-
-
Chouari, R.1
Paslier, D.L.2
Daegelen, P.3
Ginestet, P.4
Weissenbach, J.5
Sghir, A.6
-
13
-
-
0031886525
-
Metabolic transformations and characterization of the sludge community in an enhanced biological phosphorus removal system
-
Christensson, M., L.L. Blackall, and T. Welander. 1998. Metabolic transformations and characterization of the sludge community in an enhanced biological phosphorus removal system. Appl. Microbiol. Biotechnol. 49:226-234.
-
(1998)
Appl. Microbiol. Biotechnol.
, vol.49
, pp. 226-234
-
-
Christensson, M.1
Blackall, L.L.2
Welander, T.3
-
14
-
-
33745793824
-
Microbial diversity in alpine tundra wet meadow soil: Novel Chloroflexi from a cold, water- saturated environment
-
Costello, E.K., and S.K. Schmidt. 2006. Microbial diversity in alpine tundra wet meadow soil: Novel Chloroflexi from a cold, water- saturated environment. Environ. Microbiol. 8:1471-1486.
-
(2006)
Environ. Microbiol.
, vol.8
, pp. 1471-1486
-
-
Costello, E.K.1
Schmidt, S.K.2
-
16
-
-
13544277388
-
Effects of growth medium, inoculum size, and incubation time on culturability and isolatiion of soil bacteria
-
Davis, K.E.R., S.J. Joseph, and P.H. Janssen. 2005. Effects of growth medium, inoculum size, and incubation time on culturability and isolatiion of soil bacteria. Appl. Environ. Microbiol. 71:826-834.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 826-834
-
-
Davis, K.E.R.1
Joseph, S.J.2
Janssen, P.H.3
-
17
-
-
0034554845
-
Monitoring of activity dynamics of an anaerobic digester bacterial community using 16S rRNA polymerase chain reaction-single-strand conformation polymorphism analysis
-
Delbès, C., R. Moletta, and J.-J. Godon. 2008. Monitoring of activity dynamics of an anaerobic digester bacterial community using 16S rRNA polymerase chain reaction-single-strand conformation polymorphism analysis. Environ. Microbiol. 2:506-515.
-
(2008)
Environ. Microbiol.
, vol.2
, pp. 506-515
-
-
Delbès, C.1
Moletta, R.2
Godon, J.-J.3
-
18
-
-
0013258174
-
Molecular characterization of sulfate-reducing bacteria in the Guaymas Basin
-
Dhillon, A., A. Taske, J. Dillon, D.A. Stahl, and M.L. Sogin. 2003. Molecular characterization of sulfate-reducing bacteria in the Guaymas Basin. Appl. Environ. Microbiol. 69:2765-2772.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2765-2772
-
-
Dhillon, A.1
Taske, A.2
Dillon, J.3
Stahl, D.A.4
Sogin, M.L.5
-
19
-
-
33746071943
-
Phenotypic properties and microbial diversity of methanogenic granules from a full-scale upflow anaerobic sludge bed reactor treating brewery wastewater
-
Diaz, E.E., A.J.A. Stams, R. Amils, and J.L. Sanz. 2006. Phenotypic properties and microbial diversity of methanogenic granules from a full-scale upflow anaerobic sludge bed reactor treating brewery wastewater. Appl. Environ. Microbiol. 72:4942-4949.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 4942-4949
-
-
Diaz, E.E.1
Stams, A.J.A.2
Amils, R.3
Sanz, J.L.4
-
20
-
-
0034069650
-
Expanding the known diversity and environmental distribution of an uncultured phylo- genetic division of bacteria
-
Dojka, M.A., J.K. Harris, and N.R. Pace. 2000. Expanding the known diversity and environmental distribution of an uncultured phylo- genetic division of bacteria. Appl. Environ. Microbiol. 66:1617-1621.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 1617-1621
-
-
Dojka, M.A.1
Harris, J.K.2
Pace, N.R.3
-
21
-
-
0032189023
-
Microbial diversity in a hydrocarbon- and chlorinated-solvent- contaminated aquifer undergoing intrinsic bioremediation
-
Dojka, M.A., P.H. Hungenholtz, S.K. Haack, and N.R. Pace. 1998. Microbial diversity in a hydrocarbon- and chlorinated-solvent- contaminated aquifer undergoing intrinsic bioremediation. Appl. Environ. Microbiol. 64:3869-3877.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 3869-3877
-
-
Dojka, M.A.1
Hungenholtz, P.H.2
Haack, S.K.3
Pace, N.R.4
-
22
-
-
50949090204
-
Novelty and uniqueness patterns of rare members of the soil biosphere
-
Elshahed, M.S., N.H. Youssef, A.M. Spain, and et al. 2008. Novelty and uniqueness patterns of rare members of the soil biosphere. Appl. Environ. Microbiol. 74:5422-5428.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 5422-5428
-
-
Elshahed, M.S.1
Youssef, N.H.2
Spain And, A.M.3
-
23
-
-
34249652488
-
List of new names and new combinations previously effectively, but not validly, published
-
Euzéby, J. 2007. List of new names and new combinations previously effectively, but not validly, published. Int. J. Syst. Evol. Microbiol. 57:433-434.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 433-434
-
-
Euzéby, J.1
-
24
-
-
31744433158
-
Anaerobic treatment of phenol in wastewater under thermophilic condition
-
Fang, H.H.P., D.W. Liang, T. Zhang, and Y. Liu. 2006. Anaerobic treatment of phenol in wastewater under thermophilic condition. Water Res. 40:427-434.
-
(2006)
Water Res.
, vol.40
, pp. 427-434
-
-
Fang, H.H.P.1
Liang, D.W.2
Zhang, T.3
Liu, Y.4
-
25
-
-
36048939029
-
Microbial community dynamics in a chemolithotrophic dinitri- fication reactor inoculated with methanogenic granular sludge
-
Fernández, N., R.S.-Alvarez, J.A. Field, R. Amils, and J.L. Sanz. 2008. Microbial community dynamics in a chemolithotrophic dinitri- fication reactor inoculated with methanogenic granular sludge. Chemosphere 70:462-474.
-
(2008)
Chemosphere
, vol.70
, pp. 462-474
-
-
Fernández, N.1
Alvarez, R.S.2
Field, J.A.3
Amils, R.4
Sanz, J.L.5
-
26
-
-
0032708969
-
Molecular characterization of a toluene-degrading mathanogenic consorium
-
Ficker, M., K. Krastel, S. Orlicky, and E. Edwards. 1999. Molecular characterization of a toluene-degrading mathanogenic consorium. Appl. Environ. Microbiol. 65:5576-5585.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 5576-5585
-
-
Ficker, M.1
Krastel, K.2
Orlicky, S.3
Edwards, E.4
-
27
-
-
53949101331
-
Prokaryotic biodiversity and activity in the deep subseafloor biosphere
-
Fry, J.C., R.J. Parkes, B.A. Cragg, A.J. Weightman, and G. Webster. 2008. Prokaryotic biodiversity and activity in the deep subseafloor biosphere. FEMS Microbiol. Ecol. 66:181-196.
-
(2008)
FEMS Microbiol. Ecol.
, vol.66
, pp. 181-196
-
-
Fry, J.C.1
Parkes, R.J.2
Cragg, B.A.3
Weightman, A.J.4
Webster, G.5
-
28
-
-
0036135188
-
Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigeneous to freshwater lakes
-
Gich, F., J. Garcia-Gil, and J. Overmann. 2001. Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigeneous to freshwater lakes. Arch. Microbiol. 177:1-10.
-
(2001)
Arch. Microbiol.
, vol.177
, pp. 1-10
-
-
Gich, F.1
Garcia-Gil, J.2
Overmann, J.3
-
29
-
-
0029798513
-
16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the Green Non-Sulfur bacteria
-
Giovannoni, S.J., M.S. Rappe, K.L. Vergin, and N.L. Adair. 1996. 16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the Green Non-Sulfur bacteria. Proc. Natl. Acad. Sci. USA 93:7979-7984.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 7979-7984
-
-
Giovannoni, S.J.1
Rappe, M.S.2
Vergin, K.L.3
Adair, N.L.4
-
30
-
-
0030872620
-
Molecular microbiol diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis
-
Godon, J.-J., E. Zumsten, P. Dabert, F. Habouzit, and R. Moletta. 1997. Molecular microbiol diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis. Appl. Environ. Microbiol. 63:2802-2813.
-
(1997)
Appl. Environ. Microbiol
, vol.63
, pp. 2802-2813
-
-
Godon, J.-J.1
Zumsten, E.2
Dabert, P.3
Habouzit, F.4
Moletta, R.5
-
31
-
-
67649603398
-
Biodiversity of dehalorespiring bacteria with special emphasis on polychlorinated biphenyl/dioxin dechlorinators
-
Hiraishi, A. 2008. Biodiversity of dehalorespiring bacteria with special emphasis on polychlorinated biphenyl/dioxin dechlorinators. Microbes Environ. 23:1-12.
-
(2008)
Microbes Environ
, vol.23
, pp. 1-12
-
-
Hiraishi, A.1
-
32
-
-
0036181778
-
Exploring prokaryotic diversity in the genomic era
-
Hugenholtz, P. 2002. Exploring prokaryotic diversity in the genomic era. Genome Biol. 3:reviews0003.1-reviews0003.8.
-
(2002)
Genome Biol
, vol.3
-
-
Hugenholtz, P.1
-
33
-
-
0031662188
-
Impact of culture- independent studies on the emerging phylogenetic view of bacterial diversity
-
Hugenholtz, P., B.M. Goebel, and N.R. Pace. 1998. Impact of culture- independent studies on the emerging phylogenetic view of bacterial diversity. J. Bacteriol. 180:4765-4774.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4765-4774
-
-
Hugenholtz, P.1
Goebel, B.M.2
Pace, N.R.3
-
34
-
-
9744250905
-
Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description)
-
Hugenholtz, P., and E. Stackebrandt. 2004. Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description). Int. J. Syst. Evol. Microbiol. 54:2049-2051.
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 2049-2051
-
-
Hugenholtz, P.1
Stackebrandt, E.2
-
35
-
-
33748769754
-
Microbial community diversity associated with carbon and nitrogen cycling in permeable shelf sediments
-
'35. Hunter, E.M., H.J. Mills, and J.E. Kostka. 2006. Microbial community diversity associated with carbon and nitrogen cycling in permeable shelf sediments. Appl. Environ. Microbiol. 72:5689-5701.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5689-5701
-
-
Hunter, E.M.1
Mills, H.J.2
Kostka, J.E.3
-
36
-
-
70349897177
-
In situ detection and quantification of uncultured members of the phylum Nitrospirae abundant in methanogenic wastewater treatement systems
-
Iguchi, A., T. Terada, T. Narihiro, T. Yamaguchi, Y. Kamagata, and Y. Sekiguchi. 2009. In situ detection and quantification of uncultured members of the phylum Nitrospirae abundant in methanogenic wastewater treatement systems. Microbes Environ. 24:97-104.
-
(2009)
Microbes Environ.
, vol.24
, pp. 97-104
-
-
Iguchi, A.1
Terada, T.2
Narihiro, T.3
Yamaguchi, T.4
Kamagata, Y.5
Sekiguchi, Y.6
-
37
-
-
0033859882
-
Cultivation and in situ detection of a thermophilic bacterium capable of oxidizing propionate in syntrophic association with hydro- genotrophic methanogens in a thermophilic methanogenic granular sludge
-
Imachi, H., Y. Sekiguchi, Y. Kamagata, A. Ohashi, and H. Harada. 2000. Cultivation and in situ detection of a thermophilic bacterium capable of oxidizing propionate in syntrophic association with hydro- genotrophic methanogens in a thermophilic methanogenic granular sludge. Appl. Environ. Microbiol. 66:3608-3615.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 3608-3615
-
-
Imachi, H.1
Sekiguchi, Y.2
Kamagata, Y.3
Ohashi, A.4
Harada, H.5
-
38
-
-
33644505436
-
Biogeographi- cal distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin
-
Inagaki, F., T. Nunoura, S. Nakagawa, and et al. 2006. Biogeographi- cal distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin. Proc. Natl. Acad. Sci. USA 103:2815-2820.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 2815-2820
-
-
Inagaki, F.1
Nunoura, T.2
Nakagawa And, S.3
-
39
-
-
40149105259
-
Characterization of a filamentous biofilm community established in a cellulose- fed microbial fuel cell
-
Ishii, S., T. Shimoyama, Y. Hotta, and K. Watanabe. 2008. Characterization of a filamentous biofilm community established in a cellulose- fed microbial fuel cell. BMC Microbiol. 8:6.
-
(2008)
BMC Microbiol
, vol.8
, pp. 6
-
-
Ishii, S.1
Shimoyama, T.2
Hotta, Y.3
Watanabe, K.4
-
40
-
-
33644952722
-
Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes
-
Janssen, P.H. 2006. Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl. Environ. Micro- biol. 72:1719-1728.
-
(2006)
Appl. Environ. Micro- Biol.
, vol.72
, pp. 1719-1728
-
-
Janssen, P.H.1
-
41
-
-
0036250036
-
Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia
-
Janssen, P.H., P.S. Yates, B.E. Grinton, P.M. Taylor, and M. Sait. 2002. Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia. Appl. Environ. Microbiol. 68:2391-2396.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 2391-2396
-
-
Janssen, P.H.1
Yates, P.S.2
Grinton, B.E.3
Taylor, P.M.4
Sait, M.5
-
42
-
-
0035989129
-
The micro- biol community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full- cycle rRNA approach
-
Juretschko, S., A. Loy, A. Lehner, and M. Wagner. 2002. The micro- biol community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full- cycle rRNA approach. Syst. Appl. Microbiol. 25:84-89.
-
(2002)
Syst. Appl. Microbiol.
, vol.25
, pp. 84-89
-
-
Juretschko, S.1
Loy, A.2
Lehner, A.3
Wagner, M.4
-
43
-
-
1542301480
-
Simple organic electron donors support diverse sulfate-reducing communities in fludized-bed reactors treating acidic metal- and sufate-containning wastewater
-
Kaksonen, A.H., J.J. Plumb, P.D. Franzmann, and J.A. Puhakka. 2004. Simple organic electron donors support diverse sulfate-reducing communities in fludized-bed reactors treating acidic metal- and sufate-containning wastewater. FEMS Microbiol. Ecol. 47:279-289.
-
(2004)
FEMS Microbiol. Ecol.
, vol.47
, pp. 279-289
-
-
Kaksonen, A.H.1
Plumb, J.J.2
Franzmann, P.D.3
Puhakka, J.A.4
-
44
-
-
49949110962
-
Cultivation of uncultured fastidious microbes
-
Kamagata, Y., and H. Tamaki. 2005. Cultivation of uncultured fastidious microbes. Microbes Environ. 20:85-91.
-
(2005)
Microbes Environ
, vol.20
, pp. 85-91
-
-
Kamagata, Y.1
Tamaki, H.2
-
45
-
-
1642418320
-
Ecophysiological interaction between nitrifying bacteria and heterotrophic bacteria in autotrophic nitrifying biofilms as determined by microautoradio- graphy-fluorescence in situ hybridization
-
Kindaichi, T., T. Ito, and S. Okabe. 2004. Ecophysiological interaction between nitrifying bacteria and heterotrophic bacteria in autotrophic nitrifying biofilms as determined by microautoradio- graphy-fluorescence in situ hybridization. Appl. Environ. Microbiol. 70:1641-1650.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 1641-1650
-
-
Kindaichi, T.1
Ito, T.2
Okabe, S.3
-
46
-
-
38149133071
-
Identification of novel perchloroethene-respiring microorganisms in anoxic river sediment by RNA-based stable isotope probing
-
Kittelmann, S., and M.W. Friedrich. 2008. Identification of novel perchloroethene-respiring microorganisms in anoxic river sediment by RNA-based stable isotope probing. Environ. Microbiol. 10:31-46.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 31-46
-
-
Kittelmann, S.1
Friedrich, M.W.2
-
47
-
-
33847699407
-
Identity, abundance and ecophysiology of filamentous Chloroflexi species present in activated sludge treatment plants
-
Kragelund, C., C. Levantesi, A. Borger, and et al. 2007. Identity, abundance and ecophysiology of filamentous Chloroflexi species present in activated sludge treatment plants. FEMS Microbiol. Ecol. 59:671-682.
-
(2007)
FEMS Microbiol. Ecol
, vol.59
, pp. 671-682
-
-
Kragelund, C.1
Levantesi, C.2
Borger And, A.3
-
48
-
-
58149204132
-
Bacterial community composition in thermophilic microbial mats from five springs in central Tibet
-
Lau, M.C.Y., J.C. Aitchison, and S.B. Pointing. 2009. Bacterial community composition in thermophilic microbial mats from five springs in central Tibet. Extremophiles 13:139-149.
-
(2009)
Extremophiles
, vol.13
, pp. 139-149
-
-
Lau, M.C.Y.1
Aitchison, J.C.2
Pointing, S.B.3
-
49
-
-
0032986790
-
Combination of fluorescent in situ hybridization and microautoradiography-a new tool for structure-function analyses in microbial ecology
-
Lee, N., P.H. Nielsen, K.H. Andreasen, S. Juretschko, J.L. Nielsen, K.-H. Schleifer, and M. Wagner. 1999. Combination of fluorescent in situ hybridization and microautoradiography-a new tool for structure-function analyses in microbial ecology. Appl. Environ. Microbiol. 65:1289-1297.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 1289-1297
-
-
Lee, N.1
Nielsen, P.H.2
Andreasen, K.H.3
Juretschko, S.4
Nielsen, J.L.5
Schleifer, K.-H.6
Wagner, M.7
-
50
-
-
33646584137
-
Unexpected diversity and complexity of the Guerrego Negro hypersaline microbial mat
-
Ley, R.E., J.K. Harris, J. Wilcox, and et al. 2006. Unexpected diversity and complexity of the Guerrego Negro hypersaline microbial mat. Appl. Environ. Microbiol. 72:3685-3695.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 3685-3695
-
-
Ley, R.E.1
Harris, J.K.2
Wilcox And, J.3
-
51
-
-
58249114976
-
Microbial characterization and quantification of an anaerobic sludge degrading dimethyl phthalate
-
Liang, D.-W., H.H.P. Fang, and T. Zhang. 2009. Microbial characterization and quantification of an anaerobic sludge degrading dimethyl phthalate. J. Appl. Microbiol. 106:296-305.
-
(2009)
J. Appl. Microbiol.
, vol.106
, pp. 296-305
-
-
Liang, D.-W.1
Fang, H.H.P.2
Zhang, T.3
-
52
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig, W., O. Strunk, R. Westram, and et al. 2004. ARB: A software environment for sequence data. Nucleic Acids Res. 32:1363-1371.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
-
53
-
-
42049109269
-
Dehalorespiration with polychlorinated biphenyls by an anaerobic ultramicrobacterium
-
May, H.D., G.S. Miller, B.V. Kjellerup, and K.R. Sowers. 2008. Dehalorespiration with polychlorinated biphenyls by an anaerobic ultramicrobacterium. Appl. Environ. Microbiol. 74:2089-2294.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 2089-2294
-
-
May, H.D.1
Miller, G.S.2
Kjellerup, B.V.3
Sowers, K.R.4
-
54
-
-
47749094350
-
Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern gulf of mexico
-
Mills, H.J., E. Hunter, M. Humphrys, L. Kerkhof, L. McGuinness, M. Huettel, and J. Kostka. 2008. Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern gulf of mexico. Appl. Environ. Microbiol. 74:4440-4453.
-
(2008)
Appl. Environ. Microbiol
, vol.74
, pp. 4440-4453
-
-
Mills, H.J.1
Hunter, E.2
Humphrys, M.3
Kerkhof, L.4
McGuinness, L.5
Huettel, M.6
Kostka, J.7
-
55
-
-
54749106626
-
Quantification of cell specific uptake activity of microbial products by unclutured Chloroflexi by micro- autoradiography combined with fluorescence in situ hybridization
-
Miura, Y., and S. Okabe. 2008. Quantification of cell specific uptake activity of microbial products by unclutured Chloroflexi by micro- autoradiography combined with fluorescence in situ hybridization. Environ. Sci. Technol. 42:7380-7386.
-
(2008)
Environ. Sci. Technol.
, vol.42
, pp. 7380-7386
-
-
Miura, Y.1
Okabe, S.2
-
56
-
-
36249011476
-
Significance of Chloroflexi in peformance of submerged membrane bioreactors (MBR) treating municipal wastewater
-
Miura, Y., Y. Watanabe, and S. Okabe. 2007. Significance of Chloroflexi in peformance of submerged membrane bioreactors (MBR) treating municipal wastewater. Environ. Sci. Technol. 41:7787-7794.
-
(2007)
Environ. Sci. Technol.
, vol.41
, pp. 7787-7794
-
-
Miura, Y.1
Watanabe, Y.2
Okabe, S.3
-
57
-
-
34249939324
-
Microbial communities in anaerobic digestion processes for waste and wastewater treatment: A microbiological update
-
Narihiro, T., and Y. Sekiguchi. 2007. Microbial communities in anaerobic digestion processes for waste and wastewater treatment: a microbiological update. Curr. Opin. Biotechnol. 18:273-278.
-
(2007)
Curr. Opin. Biotechnol.
, vol.18
, pp. 273-278
-
-
Narihiro, T.1
Sekiguchi, Y.2
-
58
-
-
70349920944
-
Comparative analysis of bacterial and archaeal communities in methanogenic sludge granules from upflow anaerobic sludge blanket reactors treating various food-processing, high- strength organic wastwaters
-
Narihiro, T., T. Terada, K. Kikuchi, A. Iguchi, M. Ikeda, T. Yamauchi, K. Shiraishi, Y. Kamagata, K. Nakamura, and Y. Sekiguchi. 2009. Comparative analysis of bacterial and archaeal communities in methanogenic sludge granules from upflow anaerobic sludge blanket reactors treating various food-processing, high- strength organic wastwaters. Microbes Environ. 24:88-96.
-
(2009)
Microbes Environ
, vol.24
, pp. 88-96
-
-
Narihiro, T.1
Terada, T.2
Kikuchi, K.3
Iguchi, A.4
Ikeda, M.5
Yamauchi, T.6
Shiraishi, K.7
Kamagata, Y.8
Nakamura, K.9
Sekiguchi, Y.10
-
59
-
-
67349118075
-
Subseafloor microbial communities in methane hydrate-bearing sediment at two distinct locations (ODP Leg204) in the Cascadia margin
-
Nunoura, T., F. Inagaki, M.E. Delwiche, F.S. Colwell, and K. Takai. 2008. Subseafloor microbial communities in methane hydrate-bearing sediment at two distinct locations (ODP Leg204) in the Cascadia margin. Microbes Environ. 23:317-325.
-
(2008)
Microbes Environ
, vol.23
, pp. 317-325
-
-
Nunoura, T.1
Inagaki, F.2
Delwiche, M.E.3
Colwell, F.S.4
Takai, K.5
-
60
-
-
22144472619
-
14C-labeled micro- bial products derived from nitrifying bacteria in autotrophic nitrifying biofilms
-
Okabe, S., T. Kindaichi, and T. Ito. 2005. Fate of 14C-labeled micro- bial products derived from nitrifying bacteria in autotrophic nitrifying biofilms. Appl. Environ. Microbiol. 71:3987-3994.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 3987-3994
-
-
Okabe, S.1
Kindaichi, T.2
Ito, T.3
-
61
-
-
1642363219
-
Analysis of microbial diversity in oligotrophic microbial fuel cells using 16S rDNA sequences
-
Phung, N.T., J. Lee, K.H. Kang, I.S. Chang, G.M. Gadd, and B.H. Kim. 2004. Analysis of microbial diversity in oligotrophic microbial fuel cells using 16S rDNA sequences. FEMS Microbiol. Lett. 233:77-82.
-
(2004)
FEMS Microbiol. Lett.
, vol.233
, pp. 77-82
-
-
Phung, N.T.1
Lee, J.2
Kang, K.H.3
Chang, I.S.4
Gadd, G.M.5
Kim, B.H.6
-
62
-
-
33846658320
-
Investigation of total bacterial and ammonia-oxidizing bacterial community compostion in a full-scale aerated submerged biofilm reactor for drinking water pretreatment in China
-
Qin, Y.-Y., D.-T. Li, and H. Yang. 2007. Investigation of total bacterial and ammonia-oxidizing bacterial community compostion in a full-scale aerated submerged biofilm reactor for drinking water pretreatment in China. FEMS Microbiol. Lett. 268:126-134.
-
(2007)
FEMS Microbiol. Lett.
, vol.268
, pp. 126-134
-
-
Qin, Y.-Y.1
Li, D.-T.2
Yang, H.3
-
64
-
-
67549099704
-
Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge
-
Rivière, D., V. Desvignes, E. Pelletier, S. Chaussonnerie, S. Guermazi, J. Weissenbach, T. Li, P. Camacho, and A. Sghir. 2009. Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge. ISME J. 3:700-714.
-
(2009)
ISME J.
, vol.3
, pp. 700-714
-
-
Rivière, D.1
Desvignes, V.2
Pelletier, E.3
Chaussonnerie, S.4
Guermazi, S.5
Weissenbach, J.6
Li, T.7
Camacho, P.8
Sghir, A.9
-
65
-
-
34547800097
-
Pyrosequenc- ing enumerates and contrasts soil microbial diversity
-
Roesch, L.F., R.R. Fulthorpe, A. Riva, and et al. 2007. Pyrosequenc- ing enumerates and contrasts soil microbial diversity. ISME J. 1:283-290.
-
(2007)
ISME J.
, vol.1
, pp. 283-290
-
-
Roesch, L.F.1
Fulthorpe, R.R.2
Riva And, A.3
-
66
-
-
36649013680
-
Layered structure of bacterial and archaeal communities and their in situ activities in anaerobic granules
-
Satoh, H., Y. Miura, I. Tsushima, and S. Okabe. 2007. Layered structure of bacterial and archaeal communities and their in situ activities in anaerobic granules. Appl. Environ. Microbiol. 73:7300-7307.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 7300-7307
-
-
Satoh, H.1
Miura, Y.2
Tsushima, I.3
Okabe, S.4
-
67
-
-
0030569901
-
Granular sludge formation in upflow anaerobic sludge blanket (UASB) reactors
-
Schmidt, J.E., and B.K. Ahring. 1996. Granular sludge formation in upflow anaerobic sludge blanket (UASB) reactors. Biotechnol. Bioeng. 49:229-246.
-
(1996)
Biotechnol. Bioeng.
, vol.49
, pp. 229-246
-
-
Schmidt, J.E.1
Ahring, B.K.2
-
68
-
-
34249937959
-
Yet-to-be cultured microorganisms relevant to methane fermentation processes
-
Sekiguchi, Y. 2006. Yet-to-be cultured microorganisms relevant to methane fermentation processes. Microbes Environ. 21:1-15.
-
(2006)
Microbes Environ.
, vol.21
, pp. 1-15
-
-
Sekiguchi, Y.1
-
69
-
-
32044469186
-
Microbial community structure and functions in methane fermentation technology for wastewater treatment
-
In M.M. Nakano, and P. Zuber (ed.). Horizon Bioscience, Wymondham, UK
-
Sekiguchi, Y., and Y. Kamagata. 2004. Microbial community structure and functions in methane fermentation technology for wastewater treatment, p.361-384. In M.M. Nakano, and P. Zuber (ed.), Strict and Facultative Anaerobes: Medical and Environmental Aspects. Horizon Bioscience, Wymondham, UK.
-
(2004)
Strict and Facultative Anaerobes: Medical and Environmental Aspects
, pp. 361-384
-
-
Sekiguchi, Y.1
Kamagata, Y.2
-
70
-
-
0033027522
-
Fluorescence in situ hybridization using 16S rRNA- targeted oligonucleotides reveals localization of methanogens and selected uncultured bacteria in mesophilic and thermophilic sludge granules
-
Sekiguchi, Y., Y. Kamagata, K. Nakamura, A. Ohashi, and H. Harada. 1999. Fluorescence in situ hybridization using 16S rRNA- targeted oligonucleotides reveals localization of methanogens and selected uncultured bacteria in mesophilic and thermophilic sludge granules. Appl. Environ. Microbiol. 65:1280-1288.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 1280-1288
-
-
Sekiguchi, Y.1
Kamagata, Y.2
Nakamura, K.3
Ohashi, A.4
Harada, H.5
-
71
-
-
0035651020
-
In situ detection, isolation, physiological properties of a thin filamentous microorganism abundant in methanogenic granular sludges: A novel isolate affiliated with a clone cluster, the green non- sulfur bacteria, subdivision i
-
Sekiguchi, Y., H. Takahashi, Y. Kamagata, A. Ohashi, and H. Harada. 2001. In situ detection, isolation, physiological properties of a thin filamentous microorganism abundant in methanogenic granular sludges: a novel isolate affiliated with a clone cluster, the green non- sulfur bacteria, subdivision I. Appl. Environ. Microbiol. 67:5740-5749.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 5740-5749
-
-
Sekiguchi, Y.1
Takahashi, H.2
Kamagata, Y.3
Ohashi, A.4
Harada, H.5
-
72
-
-
0344034188
-
Anaerolinea thermophila gen. nov., sp. nov. and Caldilinea aerophila gen. nov., sp. nov., novel filamentous thermo- philes that represent a previously uncultured lineage of the domain Bacteria at the subphylum level
-
Sekiguchi, Y., T. Yamada, S. Hanada, A. Ohashi, H. Harada, and Y. Kamagata. 2003. Anaerolinea thermophila gen. nov., sp. nov. and Caldilinea aerophila gen. nov., sp. nov., novel filamentous thermo- philes that represent a previously uncultured lineage of the domain Bacteria at the subphylum level. Int. J. Syst. Evol. Microbiol. 53:1843-1851.
-
(2003)
Int. J. Syst. Evol. Microbiol.
, vol.53
, pp. 1843-1851
-
-
Sekiguchi, Y.1
Yamada, T.2
Hanada, S.3
Ohashi, A.4
Harada, H.5
Kamagata, Y.6
-
73
-
-
55549147887
-
Characterization of Fe(II) oxidizing bacterial activities and communities at two acidic Appalachian coalmine drainage-impacted sites
-
Senko, J.M., P. Wanjugi, M. Lucas, M.A. Bruns, and W.D. Burgos. 2008. Characterization of Fe(II) oxidizing bacterial activities and communities at two acidic Appalachian coalmine drainage-impacted sites. ISME J. 2:1134-1145.
-
(2008)
ISME J.
, vol.2
, pp. 1134-1145
-
-
Senko, J.M.1
Wanjugi, P.2
Lucas, M.3
Bruns, M.A.4
Burgos, W.D.5
-
74
-
-
0346494968
-
Effect of dilution rate on structure of a mesophilic acetate-degrading methanogenic community during continous cultivation
-
Shigematsu, T., Y. Tang, H. Kawaguchi, K. Ninomiya, J. Kijima, T. Kobayashi, S. Morimura, and K. Kida. 2003. Effect of dilution rate on structure of a mesophilic acetate-degrading methanogenic community during continous cultivation. J. Biosci. Bioeng. 96:547-558.
-
(2003)
J. Biosci. Bioeng.
, vol.96
, pp. 547-558
-
-
Shigematsu, T.1
Tang, Y.2
Kawaguchi, H.3
Ninomiya, K.4
Kijima, J.5
Kobayashi, T.6
Morimura, S.7
Kida, K.8
-
75
-
-
63849343340
-
Transcriptional activity of paddy soil bacterial communities
-
Shrestha, P.M., M. Kube, R. Reinhardt, and W. Liesack. 2009. Transcriptional activity of paddy soil bacterial communities. Environ. Microbiol. 11:960-970.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 960-970
-
-
Shrestha, P.M.1
Kube, M.2
Reinhardt, R.3
Liesack, W.4
-
76
-
-
0242266495
-
Stability of the bacterial community in a pulp mill effluent treatment system during normal operation and a system shutdown
-
Smith, N.R., Z. Yu, and W.W. Mohn. 2003. Stability of the bacterial community in a pulp mill effluent treatment system during normal operation and a system shutdown. Water Res. 37:4873-4884.
-
(2003)
Water Res.
, vol.37
, pp. 4873-4884
-
-
Smith, N.R.1
Yu, Z.2
Mohn, W.W.3
-
77
-
-
0030741576
-
Phylogenetic analysis and in situ identification of bacteria in activated sludge
-
Snaider, J., R. Amann, I. Huber, W. Ludwig, and K.-H. Schleifer. 1997. Phylogenetic analysis and in situ identification of bacteria in activated sludge. Appl. Environ. Microbiol. 63:2884-2896.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 2884-2896
-
-
Snaider, J.1
Amann, R.2
Huber, I.3
Ludwig, W.4
Schleifer, K.-H.5
-
78
-
-
61449163988
-
Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica
-
Soo, R.M., S.A. Wood, J.J. Grzymski, I.R. McDonald, and S.C. Cary. 2009. Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica. Environ. Microbiol. 11:715-728.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 715-728
-
-
Soo, R.M.1
Wood, S.A.2
Grzymski, J.J.3
McDonald, I.R.4
Cary, S.C.5
-
79
-
-
35148849618
-
Microbial community biofabrics in a geothermal mine adit
-
Spear, J.R., H.A. Barton, C.E. Robertson, C.A. Francis, and N.R. Pace. 2007. Microbial community biofabrics in a geothermal mine adit. Appl. Environ. Microbiol. 73:6172-6180.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 6172-6180
-
-
Spear, J.R.1
Barton, H.A.2
Robertson, C.E.3
Francis, C.A.4
Pace, N.R.5
-
80
-
-
64749108521
-
Filamentous bacterium Eikelboom Type 0092 in activated sludge plants in Australia is a member of the phylum Chloroflexi
-
Speirs, L., T. Nittami, S. Mcllroy, S. Schroeder, and R.J. Seviour. 2009. Filamentous bacterium Eikelboom Type 0092 in activated sludge plants in Australia is a member of the phylum Chloroflexi. Appl. Environ. Microbiol. 75:2446-2452.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 2446-2452
-
-
Speirs, L.1
Nittami, T.2
McLlroy, S.3
Schroeder, S.4
Seviour, R.J.5
-
81
-
-
55949124350
-
Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand
-
Stott, M.B., M.A. Crowe, B.W. Mountain, A.V. Smirnova, S. Hou, M. Alam, and P.F. Dunfield. 2008. Isolation of novel bacteria, including a candidate division, from geothermal soils in New Zealand. Environ. Microbiol. 10:2030-2041.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 2030-2041
-
-
Stott, M.B.1
Crowe, M.A.2
Mountain, B.W.3
Smirnova, A.V.4
Hou, S.5
Alam, M.6
Dunfield, P.F.7
-
82
-
-
17444372781
-
Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques
-
Tamaki, H., Y. Sekiguchi, S. Hanada, K. Nakamura, N. Nomura, M. Matsumura, and Y. Kamagata. 2005. Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques. Appl. Environ. Microbiol. 71:2162-2169.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 2162-2169
-
-
Tamaki, H.1
Sekiguchi, Y.2
Hanada, S.3
Nakamura, K.4
Nomura, N.5
Matsumura, M.6
Kamagata, Y.7
-
83
-
-
0036205605
-
Microbial diversity of hydrothermal sediments in the Guaymas Basin: Evidence for anaerobic methanotrophic communities
-
Teske, A., K.U. Hinrichs, V. Edgcomb, A. de Vera Gomez, D. Kysela, S.P. Sylva, M.L. Sogin, and H.W. Jannasch. 2002. Microbial diversity of hydrothermal sediments in the Guaymas Basin: Evidence for anaerobic methanotrophic communities. Appl. Environ. Micro- biol. 68:1994-2007.
-
(2002)
Appl. Environ. Micro- Biol.
, vol.68
, pp. 1994-2007
-
-
Teske, A.1
Hinrichs, K.U.2
Edgcomb, V.3
Gomez Vera A.De4
Kysela, D.5
Sylva, S.P.6
Sogin, M.L.7
Jannasch, H.W.8
-
84
-
-
0029016768
-
Inorganic composition and microbial characteristics of methanogenic granular sludge grown in a thermophilic upflow anaerobic sludge blanket reactor
-
Uemura, S., and H. Harada. 1995. Inorganic composition and microbial characteristics of methanogenic granular sludge grown in a thermophilic upflow anaerobic sludge blanket reactor. Appl. Microbiol. Biotechnol 43:358-364.
-
(1995)
Appl. Microbiol. Biotechnol.
, vol.43
, pp. 358-364
-
-
Uemura, S.1
Harada, H.2
-
85
-
-
0035033231
-
Unusual bacterioplankton community structure in ultra-oligotrophic Crater Lake
-
Urbach, E., K.L. Vergin, L. Young, A. Morse, G.L. Larson, and S.J. Giovannoni. 2001. Unusual bacterioplankton community structure in ultra-oligotrophic Crater Lake. Limnol. Oceanogr. 46:557-572.
-
(2001)
Limnol. Oceanogr.
, vol.46
, pp. 557-572
-
-
Urbach, E.1
Vergin, K.L.2
Young, L.3
Morse, A.4
Larson, G.L.5
Giovannoni, S.J.6
-
86
-
-
0030054273
-
Limitations of thermophilic anaerobic wastewater treatment and the consequences for process design
-
van Lier, J.B. 1996. Limitations of thermophilic anaerobic wastewater treatment and the consequences for process design. Antonie van Leeuwenhoek 69:1-14.
-
(1996)
Antonie Van Leeuwenhoek
, vol.69
, pp. 1-14
-
-
Van Lier, J.B.1
-
87
-
-
11144354360
-
Environmental genome shotgun sequencing of the Sargasso Sea
-
Venter, J.C., K. Remington, J.F. Heidelberg, and et al. 2004. Environmental genome shotgun sequencing of the Sargasso Sea. Science 304:66-74.
-
(2004)
Science
, vol.304
, pp. 66-74
-
-
Venter, J.C.1
Remington, K.2
Heidelberg And, J.F.3
Al, E.4
-
88
-
-
0032960491
-
Phylogenetic analysis of an anaerobic, trichlorobenzen- transforming microbial consortium
-
vonWintzingerode, F., B. Selent, W. Hegemann, and U.B. Göbel. 1999. Phylogenetic analysis of an anaerobic, trichlorobenzen- transforming microbial consortium. Appl. Environ. Microbiol.65:283-286.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 283-286
-
-
Von Wintzingerode, F.1
Selent, B.2
Hegemann, W.3
Göbel, U.B.4
-
89
-
-
0030613347
-
Bacterial diversity of a carolina bay as determined by 16S rRNA gene analysis: Cofirmination of novel taxa
-
Wise, M.G., J.V. Mcarthur, and L.J. Shimkets. 1997. Bacterial diversity of a carolina bay as determined by 16S rRNA gene analysis: Cofirmination of novel taxa. Appl. Environ. Microbiol. 63:1505-1514.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 1505-1514
-
-
Wise, M.G.1
McArthur, J.V.2
Shimkets, L.J.3
-
90
-
-
0035131221
-
Characterization of microbial consortia in a terephthalate-degrading anaerobic granular sludge system
-
Wu, J.-H., W.-T. Liu, I.-C. Tseng, and S.-S. Cheng. 2001. Characterization of microbial consortia in a terephthalate-degrading anaerobic granular sludge system. Microbiology 147:373-382.
-
(2001)
Microbiology
, vol.147
, pp. 373-382
-
-
Wu, J.-H.1
Liu, W.-T.2
Tseng, I.-C.3
Cheng, S.-S.4
-
91
-
-
0027170178
-
Comparison of rod-versus filament-type methano- genic granules: Microbial population and reactor performance
-
Wu, W.-M., J.H. Thiele, M.K. Jain, H.S. Pankratz, R.F. Hickey, and J.G. Zeikus. 1993. Comparison of rod-versus filament-type methano- genic granules: microbial population and reactor performance. Appl. Microbiol. Biotechnol. 39:795-803.
-
(1993)
Appl. Microbiol. Biotechnol.
, vol.39
, pp. 795-803
-
-
Wu, W.-M.1
Thiele, J.H.2
Jain, M.K.3
Pankratz, H.S.4
Hickey, R.F.5
Zeikus, J.G.6
-
92
-
-
35648976034
-
Belllinea caldifistulae gen. nov., sp. nov. and Longilinea arvoryzae gen. nov., sp. nov., strictly anaerobic, filamentous bacteria of the phylum Chloroflexi isolated from methanogenic propionate-degrading consortia
-
Yamada, T., H. Imachi, A. Ohashi, H. Harada, S. Hanada, Y. Kamagata, and Y. Sekiguchi. 2007. Belllinea caldifistulae gen. nov., sp. nov. and Longilinea arvoryzae gen. nov., sp. nov., strictly anaerobic, filamentous bacteria of the phylum Chloroflexi isolated from methanogenic propionate-degrading consortia. Int. J. Syst. Evol. Microbiol. 57:2299-2306.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 2299-2306
-
-
Yamada, T.1
Imachi, H.2
Ohashi, A.3
Harada, H.4
Hanada, S.5
Kamagata, Y.6
Sekiguchi, Y.7
-
93
-
-
33745320006
-
Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi
-
Yamada, T., Y. Sekiguchi, S. Hanada, H. Imachi, A. Ohashi, H. Harada, and Y. Kamagata. 2006. Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi. Int. J. Syst. Evol. Microbiol. 56:1331-1340.
-
(2006)
Int. J. Syst. Evol. Microbiol
, vol.56
, pp. 1331-1340
-
-
Yamada, T.1
Sekiguchi, Y.2
Hanada, S.3
Imachi, H.4
Ohashi, A.5
Harada, H.6
Kamagata, Y.7
-
94
-
-
32044434395
-
Diversity, localization, and physiological properties of filamentous microbes belonging to Chloroflexi subphylum i in mesophilic and thermophilic methanogenic sludge granules
-
Yamada, T., Y. Sekiguchi, H. Imachi, Y. Kamagata, A. Ohashi, and H. Harada. 2005. Diversity, localization, and physiological properties of filamentous microbes belonging to Chloroflexi subphylum I in mesophilic and thermophilic methanogenic sludge granules. Appl. Environ. Microbiol. 71:7493-7503.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 7493-7503
-
-
Yamada, T.1
Sekiguchi, Y.2
Imachi, H.3
Kamagata, Y.4
Ohashi, A.5
Harada, H.6
-
95
-
-
34547322945
-
Characterization of filamentous bacteria, belonging to candidate phylum KSB3, that are associated with bulking in methanogenic granular sludge
-
Yamada, T., T. Yamauchi, K. Shiraishi, P. Hugenholtz, A. Ohashi, H. Harada, Y. Kamagata, K. Nakamura, and Y. Sekiguchi. 2007. Characterization of filamentous bacteria, belonging to candidate phylum KSB3, that are associated with bulking in methanogenic granular sludge. ISME J. 1:246-255.
-
(2007)
ISME J.
, vol.1
, pp. 246-255
-
-
Yamada, T.1
Yamauchi, T.2
Shiraishi, K.3
Hugenholtz, P.4
Ohashi, A.5
Harada, H.6
Kamagata, Y.7
Nakamura, K.8
Sekiguchi, Y.9
-
96
-
-
0024322078
-
Granular sludge formation in the anaerobic expanded microcarrier bed process
-
Yoda, M., M. Kitagawa, and Y. Miyaji. 1989. Granular sludge formation in the anaerobic expanded microcarrier bed process. Water Sci. Technol. 21:165-173.
-
(1989)
Water Sci. Technol.
, vol.21
, pp. 165-173
-
-
Yoda, M.1
Kitagawa, M.2
Miyaji, Y.3
-
97
-
-
0035318585
-
Bacterial diversity and community structure in an aerated lagoon revealed by ribosomal intergenic spacer analysis and 16S ribosomal DNA sequencing
-
Yu, Z., and W.W. Mohn. 2001. Bacterial diversity and community structure in an aerated lagoon revealed by ribosomal intergenic spacer analysis and 16S ribosomal DNA sequencing. Appl. Environ. Micro-biol. 67:1565-1574.
-
(2001)
Appl. Environ. Micro-biol.
, vol.67
, pp. 1565-1574
-
-
Yu, Z.1
Mohn, W.W.2
-
98
-
-
46849113847
-
Analysis of the phylogenetic diversity of estrone-degrading bacteria in activated sewage sludge using microautoradiography-fluorescence in situ hybridization
-
Zang, K., F. Kurisu, I. Kasuga, H. Furumai, and O. Yagi. 2008. Analysis of the phylogenetic diversity of estrone-degrading bacteria in activated sewage sludge using microautoradiography-fluorescence in situ hybridization. Syst. Appl. Microbiol. 31:206-214.
-
(2008)
Syst. Appl. Microbiol.
, vol.31
, pp. 206-214
-
-
Zang, K.1
Kurisu, F.2
Kasuga, I.3
Furumai, H.4
Yagi, O.5
-
99
-
-
0037178021
-
Typical freshwater bacteria: An analysis of available 16S rRNA gene sequences from plankton of lakes and rivers
-
Zwart, G., B.C. Crump, M.P.K.V. Agterveld, F. Hagen, and S.K.Han. 2002. Typical freshwater bacteria: An analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquat. Microb. Ecol. 28:141-155.
-
(2002)
Aquat. Microb. Ecol.
, vol.28
, pp. 141-155
-
-
Zwart, G.1
Crump, B.C.2
Agterveld, M.P.K.V.3
Hagen, F.4
Han, S.K.5
|