Genome halving with double cut and join

Series on Advances in Bioinformatics and Computational Biology

Volumn 6, Issue , 2008, Pages 231-240

  Warren, Robert ^a   Sankoff, David ^a  

^a UNIVERSITY OF OTTAWA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

DATA SETS; RECIPROCAL TRANSLOCATION;

GENES;

BIOINFORMATICS;

EID: 70349797782     PISSN: 17516404     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (7)

1. Max A. Alekseyev and Pavel A. Pevzner. Whole genome duplications and contracted breakpoint graphs. SIAM Journal on Computing, 36(6):1748-1763, 2007.
2. Anne Bergeron, Julia Mixtacki, and Jens Stoye. A unifying view of genome rearrangements. In Philipp Bücher and Bernard M.E. Moret, editors, Algorithms in Bioinformatics: 6th International Workshop, volume 4175 of Lecture Notes in Computer Science, pages 163-173. Berlin, Heidelberg: Springer-Verlag, 2006. (Pubitemid 44609667)
3. Nadia El-Mabrouk and David Sankoff. The reconstruction of doubled genomes. SIAM Journal on Computing, 32:754-792, 2003.
4. Fabien Kuttler and Sabine Mai. Formation of non-random extrachromosomal elements during development, differentiation and oncogenesis. Seminars in Cancer Biology, 17(1):56-64, 2007. (Pubitemid 46054485)
5. David Sankoff, Chunfang Zheng, and Qian Zhu. Polyploids, genome halving and phylogeny. Bioinformatics, 23:i431-i439, 2007.
6. Sophia Yancopoulos, Oliver Attie, and Richard Friedberg. Efficient sorting of genomic permutations by translocation, inversion, and block interchange. Bioinformatics, 21(16):3340-3346, 2005. (Pubitemid 41222437)
7. Chunfang Zheng, Qian Zhu, and David Sankoff. Parts of the problem of polyploids in rearrangement phylogeny. In Glenn Tesler and Dannie Durand, editors, Proceedings of the RECOMB 2007 Workshop on Comparative Genomics, volume 4751 of Lecture Notes in Computer Science, pages 162-176. Berlin, Heidelberg: Springer-Verlag, 2007.